Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10261
Subject:
XR_001748697.2
Aligned Length:
2913
Identities:
63
Gaps:
2841

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCCCTTTTTCATTCACTGAATAATTTCACTACTTTACAAATATGTGTCAGGCACTAGGCTAGCAGACACACACA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TAATATTTGTTAAATAACCATACCTTTCTAGAAGGAACTTCCCCTTTAAAGTTTTTCTATATACAAATTGAGAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ACAGGTAGAAAGAATCCACATTCTTAGAACTTATTCTTAGCAGATAATTTAATTTGAATCTCAATGAAAATGAA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATTTAATAAATATGACTATTAAGAGACAATCAGAGTCATATTTTTAAAAAGTACATTCACTGACCTAATGAGTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ATGATGTGTGGAGAACATATCACAGAACCAGAAACATCCTGTCCAAAACAGCCTAGCATATTTTAGTTCAACAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ACAAAATGATGTGTTGAAATTTAGTTGGTGAGATAAGACAAAGCCAGCCCATTTGGGTCTAAATTTATGAGATT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTTTATCCAGAACATGATTATAATGATTATTTCACTTAGAGTTGTGTGAATCTGACCTAACCAAGGATAACAAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGGTAGGTCGAAGATCATATTTATGACATCTTGGCCCTGGATTTTTCCAGTTCGTTCAGACTTCAAAACCTTTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AAGGGAGTCTTAGGTTCTTACCTTATTGTTATTAAGATGTTCGAAAAGCTCAAGAATTCTAAAAAGCCAGAATG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGGGGATAACTTTCACCAAAGACTTTTCCTTTATCTTTTGTTGTACGTGGTCACTTAACTGTTTTAGCTTAATT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TAACAAAAAAGATGAGAAAATATTTTTACAGTATCATGAGATGAGGCTTCTAATGGGCTGGTGGCCAAGGATGG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GGAAAAGAATCAAGGACAGATTAAATCTCCAAAGTAAGAGAATCTATTATATAGCAAACAAACTTGTATAATTA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATCTCTAGGAGCACGGGTTCTAATAAGCCCAGGTACCACAAAGATAGAGAATTGCTTCTTCTGTCCAGGCAAAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGCATGACTAAAGGTGTGACTTGCTCTCTGGGGATGATACCAATTTGGCAGCAGCATTTCCTTCCTTCCTTCTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TCCATCCTTCCTTCCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTCCTTC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CTTCCTTCCTTCCCTCCTTCCCTCCCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CTTTCTTTCTTTCTTTCTTTTTCTTTCTTTCTTTCTCTCTCTTTCTTTCTTCTTTTCTCTTTCTCTCTGTCTTT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TGTTTGTTCGTTCATTTTTGAGACAGAGTCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCATGATCTCAGTT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CACTGTAACCTCCACTTCCCGGGTTCAGGCGATTCTCCTGCCTCAGCCTCCTAAGTAGCTGGGATTACAGGTGC  1406

Query    1  ----------------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGG  34
                                                    ||||||||||.||||||.||.||||||||.||.|
Sbjct 1407  CCGCCATCATGCCCAGCTAATTTTTGTATTTTTACTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGACTTG  1480

Query   35  AACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------------------------  72
            ||||||||||||.|.|||||||||||.|||||||||.|                                    
Sbjct 1481  AACTCCTGACCTGAAGTGATCCGCCCGCCTCAGCCTTCCAAAGTGTTGGGATTACAGACGTGAGCCACTTTTTC  1554

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1555  TCTTTCTTAAAACATTTTGCCCAATGCTAAATTTTACTGCTTGGTTTCACCATAGTAATCTGCTCTAGAAGAAA  1628

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1629  ATTACCACAGGTGGGATTGTCAAGGTGTTCCGGGATAATCATTTCTACTTTCTTTCTTTTTTTTTTTGGAGACA  1702

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1703  GGTTCTTACTTTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTCAGCTCAATGCAGCCTCAACCTCCCAGGCT  1776

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1777  CAAGCTACCTTCTTACCTCAGCCCCCCAAGTCGCTGGGACCACAGCTTCAACTCACTCCCCAATCAAGGTGAGT  1850

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1851  GTGTATCTCCCATGAGTGAGTAAACTACCACGTGCCCATCACCCAGCTTCAACAAGCATCGACTCACTCTCCAA  1924

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1925  TCAAGGTGAAATATCAGACATCATGTGATTTTATCGATTCTTTAATCTCCAGCTCAGCTTCAACAATTCAACGC  1998

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1999  TGTTCTTTCTGAAAAAGTACACATCGTGCCTTCTCTACTTCGCTCTTGGAACATAATTTCTCATGGCAGTGTTT  2072

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2073  AAGACCACTCTGTGGAGGTTAATTTCTGGGACCTTAGGGATAATATGCCTTTCGTTGATGTCTACGTTGGGAAT  2146

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2147  TTTGTTGAAAAATTCTTTTACTAAACTGAGTATTGAGCCAGCATTTACTCCAGGACCCAACATAGAACTCCAGA  2220

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2221  AAGACTCTGACTGCTGTTCTTGCCAAGAAAAATGGGTTGGGTACCGGTGCAACTGTTACTTCATTTCCAGTGAA  2294

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2295  CAGAAAACTTGGAACGAAAGTCGGCATCTCTGTGCTTCTCAGAAATCCAGCCTGCTTCAGCTTCAAAACACAGA  2368

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2369  TGAACTGCAGGATTTTATGAGCTCCAGTCAACAATTTTACTGGATTGGACTCTCTTACAGTGAGGAGCACACCG  2442

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2443  CCTGGTTGTGGGAGAATGGCTCTGCACTCTCCCAGTATCTATTTCCATCATTTGAAACTTTTAATACAAAGAAC  2516

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2517  TGCATAGCGTATAATCCAAATGGAAATGCTTTAGATGAATCCTGTGAAGATAAAAATCGTTATATCTACAAGGT  2590

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2591  CTTGCTATGTTGCCCAGGCTGGTCTTGAACTCCTGGCCTCAAGGGATTCTCCCACCTTGGATTCCCAAAGTGCT  2664

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2665  GGGATTATAGGTGTGAACCACCATCCCTGGCCCTCTTCACATTCTTGTATGAAGATTGATTTGGGAAAAATGCA  2738

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2739  TTTCAGAATGATCCATGTGCACTTGAGAAGAATGTATACTCTGCTGCTGTTGGATGGAATGTTCTGCACATGTC  2812

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2813  TGTAGGTGACTTGACTTGCAGTGTTGATCAGGTCATCTGGGTCTTTGTTGCCTTTATGTTTGGTTGTTCTATCC  2886

Query   73  ---------------------------  72
                                       
Sbjct 2887  ATTATTAAAAGTGAGCACTGAAATCTC  2913

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