Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- XR_001748857.1
- Aligned Length:
- 4352
- Identities:
- 65
- Gaps:
- 4280
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAAGTTGTAGGCGGGGCGCGAGGTTCTAGTACCCGAGCTCATACTAGGGACGGGAAGTCGCGACCAGAGCCATT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGGGCGCGGGGACTGCAACCCTAATCAGAGCCCAAATGGCGCAGTGGGAAATGCTGCAGAATCTTGACAGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTTTCAGGATCAGCTGCACCAGCTTTACTCGCACAGCCTCCTGCCTGTGGACATTCGACAGTACTTGGCTGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGGATTGAAGACCAGAACTGGCAGGAAGCTGCACTTGGGAGTGATGATTCCAAGGCTACCATGCTATTCTTCCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTCTTGGATCAGCTGAACTATGAGTGTGGCCGTTGCAGCCAGGACCCAGAGTCCTTGTTGCTGCAGCACAATT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCGGAAATTCTGCCGGGACATTCAGCCCTTTTCCCAGGATCCTACCCAGTTGGCTGAGATGATCTTTAACCTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTTCTGGAAGAAAAAAGAATTTTGATCCAGGCTCAGAGGGCCCAATTGGAACAAGGAGAGCCAGTTCTCGAAAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACCTGTGGAGAGCCAGCAACATGAGATTGAATCCCGGATCCTGGATTTAAGGGCTATGATGGAGAAGCTGGTAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AATCCATCAGCCAACTGAAAGACCAGCAGGATGTCTTCTGCTTCCGATATAAGATCCAGGCCAAAGGGAAGACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCCTCTCTGGACCCCCATCAGACCAAAGAGCAGAAGATTCTGCAGGAAACTCTCAATGAACTGGACAAAAGGAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAAGGAGGTGCTGGATGCCTCCAAAGCACTGCTAGGCCGATTAACTACCCTAATCGAGCTACTGCTGCCAAAGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGGAGGAGTGGAAGGCCCAGCAGCAAAAAGCCTGCATCAGAGCTCCCATTGACCACGGGTTGGAACAGCTGGAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACATGGTTCACAGCTGGAGCAAAGCTGTTGTTTCACCTGAGGCAGCTGCTGAAGGAGCTGAAGGGACTGAGTTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCTGGTTAGCTATCAGGATGACCCTCTGACCAAAGGGGTGGACCTACGCAACGCCCAGGTCACAGAGTTGCTAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGCGTCTGCTCCACAGAGCCTTTGTGGTAGAAACCCAGCCCTGCATGCCCCAAACTCCCCATCGACCCCTCATC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTCAAGACTGGCAGCAAGTTCACCGTCCGAACAAGGCTGCTGGTGAGACTCCAGGAAGGCAATGAGTCACTGAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGTGGAAGTCTCCATTGACAGGAATCCTCCTCAATTACAAGGCTTCCGGAAGTTCAACATTCTGACTTCAAACC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGAAAACTTTGACCCCCGAGAAGGGGCAGAGTCAGGGTTTGATTTGGGACTTTGGTTACCTGACTCTGGTGGAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAACGTTCAGGTGGTTCAGGAAAGGGCAGCAATAAGGGGCCACTAGGTGTGACAGAGGAACTGCACATCATCAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTTCACGGTCAAATATACCTACCAGGGTCTGAAGCAGGAGCTGAAAGTGAGTGAAAATGGAGGGCAAGGAGAGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GAAAGCAGCTTTGGAAGAAGGCATAAGAAGGGGATAAACAGAAGCCTCTTGGGGACCCCTGGCTTCCCTCATCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCTGTCTGTGGCTATCTGTCCCACAGGGCAGAACTGTAGGACTGAGGATCCATTATTGTCCTGGGCTGACTTCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTAAGCGAGAGAGCCCTCCTGGCAAGTTACCATTCTGGACATGGCTGGACAAAATTCTGGAGTTGGTACATGAC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CACCTGAAGGATCTCTGGAATGATGGACGCATCATGGGCTTTGTGAGTCGGAGCCAGGAGCGCCGGCTGCTGAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAAGACCATGTCTGGCACCTTTCTACTGCGCTTCAGTGAATCGTCAGAAGGGGGCATTACCTGCTCCTGGGTGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGCACCAGGATGATGACAAGGTGCTCATCTACTCTGTGCAACCGTACACGAAGGAGGTGCTGCAGTCACTCCCG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTGACTGAAATCATCCGCCATTACCAGTTGCTCACTGAGGAGAATATACCTGAAAACCCACTGCGCTTCCTCTA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TCCCCGAATCCCCCGGGATGAAGCTTTTGGGTGCTACTACCAGGAGAAAGTTAATCTCCAGGAACGGAGGAAAT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ACCTGAAACACAGGCTCATTGTGGTCTCTAATAGACAGGTGGATGAACTGCAACAACCGCTGGAGCTTAAGCCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GAGCCAGAGCTGGAGTCATTAGAGCTGGAACTAGGGCTGGTGCCAGAGCCAGAGCTCAGCCTGGACTTAGAGCC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACTGCTGAAGGCAGGGCTGGATCTGGGGCCAGAGCTAGAGTCTGTGCTGGAGTCCACTCTGGAGCCTGTGATAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGCCCACACTATGCATGGTATCACAAACAGTGCCAGAGCCAGACCAAGGACCTGTATCACAGCCAGTGCCAGAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CCAGATTTGCCCTGTGATCTGAGACATTTGAACACTGAGCCAATGGAAATCTTCAGAAACTGTGTAAAGATTGA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGAAATCATGCCGAATGGTGACCCACTGTTGGCTGGCCAGAACACCGTGGATGAGGTTTACGTCTCCCGCCCCA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCCACTTCTACACTGATGGACCCTTGATGCCTTCTGACTTCTAGGAACCACATTTCCTCTGTTCTTTTCATATC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TCTTGCCCTTCCTACTCCTCATAGCATGATATTGTTCTCCAAGGATGGGAATCAGGCATGTGTCCCTTCCAAGC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGTGTTAACTGTTCAAACTCAGGCCTGTGTGACTCCATTGGGGTGAGAGGTGAAAGCATAACATGGGTACAGAG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GGGACAACAATGAATCAGAACAGATGCTGAGCCATAGGTCTAAATAGGATCCTGGAGGCTGCCTGCTGTGCTGG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GAGGTATAGGGGTCCTGGGGGCAGGCCAGGGCAGTTGACAGGTACTTGGAGGGCTCAGGGCAGTGGCTTCTTTC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CAGTATGGAAGGATTTCAACATTTTAATAGTTGGTTAGGCTAAACTGGTGCATACTGGCATTGGCCCTTGGTGG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GGAGCACAGACACAGGATAGGACTCCATTTCTTTCTTCCATTCCTTCATGTCTAGGATAACTTGCTTTCTTCTT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TCCTTTACTCCTGGCTCAAGCCCTGAATTTCTTCTTTTCCTGCAGGGGTTGAGAGCTTTCTGCCTTAGCCTACC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ATGTGAAACTCTACCCTGAAGAAAGGGATGGATAGGAAGTAGACCTCTTTTTCTTACCAGTCTCCTCCCCTACT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 CTGCCCCTAAGCTGGCTGTACCTGTTCCTCCCCCATAAAATGATCCTGCCAATCTAATGTGAGTGTGAAGCTTT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GCACACTAGTTTATGCTACCTAGTCTCCACTTTCTCAATGCTTAGGAGACAGATCACTCCTGGAGGCTGGGGAT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GGTAGGATTGCTGGGGATTTTTTTTTTTTTAAACAGGGTCTCACTCTGTTGCCCAGGCTAGAGTGCAATGGTGC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AATCACAGCTCACTGCAGCCTCAACCTCCTGGGTTCAAGCAATCCTCCTACCTCAGCCTCCTGGGTAGCTAGCA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CCATGGCATGCGCCACCATGCCCTATTTTTTTTTTTTAAAGACAGGGTCTTGCTATATTGCCCAGGCTGGTCTT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GAACTGGGCTCAAGTGATCCTCACGCCTTGGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACTGTGCTTG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GCCAGGATTTTTTTTTTTTTTTTTTTGAGATGGAGTTTCTCTCTTGTTGTCCAGGCTGGAGTGCAATGGTGTGA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TCTCGGCTCACTGCAACCTCCGCCTTCCGGGTTCAAGTGACTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGATT 3774
Query 1 -----------------------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCT 27
|.|||||||||||||||.|||||||||
Sbjct 3775 ACAGATCTGCACCACCATGCCCAGCTAATTTTGTATTTTTAGTAGAGACGGGGTTTCTCCATGTTGGTCAGGCT 3848
Query 28 GGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC----------------------------- 72
|||||.|||||||||||||||.||||||.|.|||||||.||||||
Sbjct 3849 GGTCTCGAACTCCTGACCTCAAGTGATCTGTCCACCTCGGCCTCCCAGAGTGCTGGGATTACAGGCGTGAGCCA 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 CTGTTCCCAGCAGGAATTTCTTTTTTATAGTATTGGATAAAGTTTGGTGTTTTTACAGAGGAGAAGCAATGGGT 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 CTTAGCTCTTTCTCTATTATGTTATCATCCTCCCTTTTTTGTACAATATGTTGTTTACCTGAAAGGAAGGTTTC 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 TATTCGTTGGTTGTGGACCTGGACAAAGTCCAAGTCTGTGGAACTTAAAACCTTGAAGGTCTGTCATAGGACTC 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 TGGACAATCTCACACCTTAGCTATTCCCAGGGAACCCCAGGGGGCAACTGACATTGCTCCAAGATGTTCTCCTG 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 ATGTAGCTTGAGATATAAAGGAAAGGCCCTGCACAGGTGGCTGTTTCTTGTCTGTTATGTCAGAGGAACAGTCC 4292
Query 73 ------------------------------------------------------------ 72
Sbjct 4293 TGTTCAGAAAGGGGCTCTTCTGAGCAGAAATGGCTAATAAACTTTGTGCTGATCTGGAAA 4352
