Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- XR_001749034.2
- Aligned Length:
- 5961
- Identities:
- 42
- Gaps:
- 5914
Alignment
Query 1 ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC-- 72
|||||||..||||||.||||||||||||||.|||||||||.||||||
Sbjct 1 -------------------------CTGGTCTCAAACTCCCGACCTCAGGTGATCTGCCCACCTCGGCCTCCCA 49
Query 73 -------------------------------------------------------------------------- 72
Sbjct 50 AAGTGCTGAGATTACAGGCGTGAGCCACCGTGCCCAGCCAAGTTTAATTTTTACACCAATGATTCATTTCTGCT 123
Query 73 -------------------------------------------------------------------------- 72
Sbjct 124 TTTACAGGTGATTACTTTATCTCACTAGAAAAAAAAAATGTAAAAATCTAAACAAAAAGTGTCCAAAACTTACA 197
Query 73 -------------------------------------------------------------------------- 72
Sbjct 198 ATAAGCCTTAATCTCGAATAATTACCATGACATGTGTTACTTGTGTGCTTATTGCTGTACAGCCTTCTTTGGCT 271
Query 73 -------------------------------------------------------------------------- 72
Sbjct 272 TTCTGACAAGAGCAACTGCTGAGCAGAAGCACTTCAGCCTCGTCTGGCATTTGATGAATTTGATTAATGTGTGC 345
Query 73 -------------------------------------------------------------------------- 72
Sbjct 346 TATGGTTTTTGGGGAACAGGTGACATTTGGTTACATGATTGTCCTGAAGCTAGGAACTTATCCACAGGGCAAAA 419
Query 73 -------------------------------------------------------------------------- 72
Sbjct 420 ATTGGAGAATGCTTCTCTAACACAGTTGAAAGAATGATCCAGTGAGAATTAGAAGACACTAAGGATCATGTGAA 493
Query 73 -------------------------------------------------------------------------- 72
Sbjct 494 AGAGCTCCCTGAGGACAGATTAAGAGGAGATGAGTTAAAGCTGCAAATACCAAGATTTAAGATGAAATTAAGAA 567
Query 73 -------------------------------------------------------------------------- 72
Sbjct 568 TGCTGATCAGCTAAAGGACCTTCACATACAAAGGTTATCCTGGATTATTCAGGTGGGCTCAACGTAATCACAAG 641
Query 73 -------------------------------------------------------------------------- 72
Sbjct 642 GATCCTTTAAAGTGGAAGAATGAGGTCAGAGTGATGTGATGTGAAAAGCACTCAATTTGCCTTTGCTAGTTTTG 715
Query 73 -------------------------------------------------------------------------- 72
Sbjct 716 AAGATGGAAGAATGGGGCCATGGTCCAAGGCATGCTGGTGACCTCTAGAAGCTGAAAAAGTTAAGAAAATGGAA 789
Query 73 -------------------------------------------------------------------------- 72
Sbjct 790 AAGAAACTTCAGCGCAGTGAGGCCCAATTTGGACTTCTGACTCCAGAACTGCAAGATAATACATTTGTATCCAT 863
Query 73 -------------------------------------------------------------------------- 72
Sbjct 864 TAAGCCACTAAGTTTGTGCTAATTTGCTATGGCAGCAACAGGAGACTAATACACCTTGGCAGCCCTATTTGCAT 937
Query 73 -------------------------------------------------------------------------- 72
Sbjct 938 CACCTTGCGGGTACTGGGGTTTGGAGGAATTGGCTCAGATGCTGATACCGTGGCTACTACTATTGTGTCAGAAA 1011
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1012 CGTGACTGAAACATTTCTTCCTCTTAAGAGGCATTAAGAGAAAAGGATAGATTTCCTGTTTCTTTTGCAATTTT 1085
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1086 CCTCTTTAAGAAACAGAAAGAAAAAAAGATCTTATGTCCATGCTCCTGGAAGTCACCAATAAATAATACGGGCC 1159
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1160 AGGGCTTTTTCTTTTCAGCAGTGGGCTGATTAAATCCTTATACTTGTTCTGGGTTATATGTCTGAAATTTGTGT 1233
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1234 TCCTTTTGTTCTGAGGAGTACAAAATAATCAATTCCTCTAATGGAGATTACCAGCTTGATTAATAGATAATCCT 1307
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1308 AATGTGTTCTTTGTAAAATACATTATAAATGATCTTTAAAGTTGAAGGAAAGAAGATTGGGCCATGTAGAAATT 1381
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1382 TGGTTCTCAACAGAACCTCTTCTTGATTGAAGAAATATAAGCAAAGAGTTTTATATATTTCGGTAAGGGTAGGT 1455
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1456 AGTCTATGCATTTTCTGTTCTGAGTATTACAAAAGGAAAAGGGAATAAAAGCTTCTGCATATAGCAGAGATAAA 1529
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1530 CTCCAAAAGCAGGAGACCAGTGAAGCCCTGGATCACTGCACTCCTCCAGCCTTCAAGGAGCATGAAGAGGGTCC 1603
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1604 ACATAACAACAGAAGATGCTTCAGAACAAATTATGAGTCCATAAGAGATAAATTAGTGTCTTTATTCATTGCAA 1677
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1678 AGGAATGGTTATTATAAAAAAATCCCTGATGCTGTCTCTCAGACTGAACTTACGTATAGGCAGGAGAACACATG 1751
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1752 TAATTTATTGACTGATAAAACTGTAGGTAAGAATACATATGACTTCTATAACTTGTATGAAAAATGAAACTACA 1825
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1826 CTTAAATGTAGGAGCAGTTTATATTGTTTGATATTTAACTGGTTGAGTGGTTAACATATAATATTTAAAAAAAT 1899
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1900 CTTCTTTTAGTAGGCAGTTTAATGCTTATGGTCTAATTTTTATTTGAAGACATTTTGCTGCAGCAGAAACATAG 1973
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1974 CTGTGATTCATATACCTACTCTTGATATTAGCCTGGCCGTTTGTCCTGTGACGCTTAAGCTAGTTACCACCATT 2047
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2048 TATCTGGTAACTGTTTCCAGAATTGAAGAGATGATGCCTGGAAGGAGATAAACTTCAGGAGTTCACCTTTAAGC 2121
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2122 CTAAAAAGTACCAGCAAAATGCAATGACAGGATAAAAAGTTTGTCATAAATATTTTCACAAGATGGAAGACAAG 2195
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2196 AAAGCAAAGAGCAGCATAGAAAGAATGAAGGAATAAATAAAAATAAGTGAAAATGCTGCATTTTCTCTCATGGG 2269
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2270 ATAGATTTTTCAACAACTCCTGAACTATGACCTCTCAAGTTCTTTTGCAGTTCTGTTCTAAGAAGTAATGAAAT 2343
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2344 ACATTTAATATTCCTGTCTTTTCACAACATTAATTCATTCCTACTTTAGCCTTAAGAATTTTAGTAGAATCTAT 2417
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2418 TGTTTATTCATGCGTATAAATATTGTGGAAAAATATCTTTAGATGAGTTAGTATATATGAGACACTTAGGCCAG 2491
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2492 GATTTGGCACATGTCTGTACTTCATAAGTGTTTGTTATTGTTATTTTTAACAAGAGTAAAAAAAGATCTTATGA 2565
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2566 CGCATCTAATATCATTTAAGCTGTTTATGGTTACTCCTTGGAATGCCTTCTGGTCAAAAGTTTCTGCAGCCCAG 2639
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2640 CACGACATTAATTTGAATGCATTGAGCCGGTTTCCCAGAGGGCTGGATGACATTTTTGACTTTTTAGGATTTTT 2713
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2714 GAGACTTTTTCTAATGACTAAGGTCAAAATCTCCCTTTCCTTGTCTCTTGAGTTTTAGGGGGCAACCAGAGATG 2787
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2788 TTTTGAAGGAAACCAACCATTAGATGTCACTTTCTTCTCACTGCTTTTGGTTTTAGGACCTATGACCTGGGTTT 2861
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2862 AAGCCTTTTGATTTTCTTCTTTTTTTTGAATGTCTATAAATAGTCTCTATGTCAAAGCTAAACGGGAAATTTAA 2935
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2936 TTTTAGATTAGTAGATAAGAGACAATACTCAACTCCTTGGAATGATGAAATTTTGGACCTGTTTTAAATTGGCC 3009
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3010 TGACTCAATGTCCCTAGTTGACTAAATTTGGAAATGTAGTATTTGTGCTTTTCTTTCTCACTGAAGTTAGTGTG 3083
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3084 GCACTGTTTCTACACCAGACACTTAGGCCTGAGTGTATGAGTGTATCCTTATTCAGGTCAAAGCTAATGAGTTT 3157
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3158 TTTTTTTTTTTTCCTTAGCAATCACTGAATGAAAAACATATTCTTCAGATATCTGTTTAGAATTGCTTTTCCAG 3231
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3232 AAAACCTTTGTGATCTTTCTCCCCCAACAGAAGGGCTCAGAAACACATAACAGTTTGAAAAAGAGAAAAAATAC 3305
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3306 TGCTGCTATGGTCTGAACATTTATGTCTGCTCCAAAATTCATGTTGAGACTTAATCCCCATTGTGGTGGTAGTA 3379
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3380 GGAGGGGTGCCTTTAGCAGGTGGTTAGGCCATGGGGGCTCTGCCCTTGTGAATGGATTAGTGTCTTGTAAAAGG 3453
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3454 ACTAGAGGGAACTGGCTTAAGGTCTCCTTACTCCTCCTCCTTCTGCCATGTGAGGATGCCACTGCAAGAACATG 3527
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3528 CCACTGATGGAGCAGTCCTCACCAGACGCCAAACCTACCAGTGCCTTGACCTTGGACTTCTCAGCCTCTAGAGC 3601
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3602 TGAGAGAAATACATTTATATTCTTTATCAATTGCCCAGTGTCAGGAACTTTATTATAGCAGCACAAATGGATGA 3675
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3676 AGATAACTGCCAATCATGATTTTAGGAAAGAACCTGACTCAAGAACATCTTCTTGGCCGGGCCCGGTGGCTCAC 3749
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3750 GCCTGTAATCCCAGCACCTTGGGAGGCTGAGGTGGGCAGATTACGAGGTCAGGAGATCGAGACCATCCTGGCTA 3823
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3824 ACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTTAGCCGGGCATGGTAGCGGGTGCCTGTAGTCCCA 3897
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3898 GCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACTTGGGAGGTGGAGCTTGCAGTGAGCTAAGATTGTGCC 3971
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3972 ACTGCACTCCAGCCTGGGTGAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAGAATATCTTCTTTCCAG 4045
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4046 TCTTATACCTTCTGCTTCCCCTCATCATTTCTATCCTGTAGAAGCCTGACACTGAGCAGTGGCCAGAAGGAGGT 4119
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4120 TTTGAGCTCTTTGAGACTTGTTTCCTTGGTGGCCATAGGCTTTGCTCTATTGAAGACCTTTAACTAGTAAAGGT 4193
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4194 TATTCGTATCTTTGGGTCTGAGAATGTGTCCAAAACCTATGAAGCACTCATCCTATATGACAGGATTAAAATGC 4267
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4268 CCACGGATGTCCAAAACCAAAAAACAAACAAGTAGCTTTTTACATTTTATTTAACCGACATTTCATCTTGCTTT 4341
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4342 TGCTCCTACTGATATGAAATGAACACCCCACAACCCTTAAAATGCTGTATTAGTTTGCTATGGCTGCCGTAATG 4415
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4416 AAATGCCAGGGACTGGATGGCTGAAACAACAGAAATTAATTTTTTTATGGTTTTAGAGGCTGGAAGTCCAAGAT 4489
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4490 TCGGGTGTTGGCAGTGCTCGTTTCTCATGAAGCCTCTCTCCTCGGCTTGCAAATGGCTGCCTTCTCTCTGTGTT 4563
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4564 CTCACATGGTCTTTCCTCTGTGTGTGGGCATCTAGTGTTTCCTTGTATGTCCAAATTTCCTTTGCTTATAATAC 4637
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4638 CAGTCAGATTGGATTACTGTCTACCCTTAGGGCCTCGTTTTAACTTCATCACCTCTTTAAAGGCCCTATCTCTA 4711
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4712 AATACAGTTAAGTTCTGGGGTATGGAGGGTTAGGGCTTCAACACACAAATTTGTGTGTGTGAGGGCACAATTCA 4785
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4786 GCATATGCCCCTGGTCAATAAAAAGCAACCCAGTTTCTTCTGTTTCAAATCAATTGCTTTCTGCTAAATACTCA 4859
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4860 TTAAAAGTTTAAGCTTTTCTTATCTCTCAAGGGGTCTCTCCTCATTCCTCCTTCCCAAGTTGGTGCCTGGGTTC 4933
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4934 ATGCAGAAGCTTAGTATCTTGAAGAGAGTGGAAGAGGCCTTTACCCTCTGGGACTTTGCTGGACTCTACCAGCT 5007
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5008 GGACCCTTATCCCACTGTGGTGACCAGGCCTTCTGTGCTGGTGTTCCTCATAGTGGGCTGGTTGGATCCTATTC 5081
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5082 TTGGTCATTCTCTTGACTGTCACTGCTAGTGGCTGTGAGATTTGCCATTGCCTCGGGAGGTAAGGTCTCTGTAG 5155
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5156 ACTCTCATTTTTTTTCTCCAGATCACAGGTATCTTCCAATCATTGCGAAAGACTGTAAATTGAAAGAAAAGATT 5229
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5230 ACTGCGAGTCTTTAATGAAAAACAAAGCATAGTCTAGTGTATCCTTCTAGTTATCTGGTTCCTTTCATTGTGTT 5303
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5304 TGAGCTATTTTACAGTTCTGTAAATTGTAGGAAACTAAAAGTGATGTATATGATTCTTGTCTGCAGCAATGCAA 5377
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5378 ATGACTTGTATCTAGTGGAATGCAATAATTTATTGCCCTGCAGACAGCTCCATTTTGCATCTATTTGTAAATTT 5451
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5452 GTTGCAGCATTTATATATATATTCTTTGAATTCTCTTTAGAGCCAGATGTAACATCTTACCAATTCCCTCATTA 5525
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5526 ATTAATGAGTTAAAAACAGTCTTTGAATTGTGTTCAGTTTGTATTTGTATGGGAGTCATTATACTTCCCTGAAA 5599
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5600 AAATGAAATTATCTTTTAAAAAGTCTATTGTTCTTAGAATTTCCATGTTACCCATGTGAGCATATGCAAATTTC 5673
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5674 AGGATCTACTGCATGCTATTCTCAAGTAATGGACTACTAGAAATGCTAGCTCTAGCTCATCTAGCTAGCCAGGC 5747
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5748 ATGGAGATTTGGGGAATTTTTTTTTTTGGCAGGAGTGTGGTAGTGGTGGTGGTGGCGTTTCTGTCAGGTTGTGG 5821
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5822 CCCAGGAAGGTGGTATGTAGGCCCTGATTTCTTTCTTGGAATCTCAGGCATTATATTACGCTAGCTTTACCTTT 5895
Query 73 ----------------------------------------- 72
Sbjct 5896 TCAATTTTTAATATTTAATATTTTTTGGGATGGATTCTTTC 5936
