Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- XR_001750460.1
- Aligned Length:
- 6852
- Identities:
- 63
- Gaps:
- 6780
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTTTGTGCAGCGAGCCCGCGGGCACCCCTCCCGCTCCAGCCTCGCCCCGCCCCGCAGCCCACGACCCCTGCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGGGGAGGGGAGAACCGGCGGCAGCCCGGGACTCCGGCGAGAGCGACGCAAGGTCGGCTGCGGCGGCGGCCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGGCGCCCGTGTGCCCAGTGCGCGGCGGGGACGGCCGCGAGCTCGCTGGAGGGCTCCCCAGAATAATCCAGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTCGATTCCATCATGGCAGAACTCAAGGTGGAGGCGCCGGCCAGCGTAGACTGGCAGAAACGCTGCCTGACCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGAAACTCAGCTTTTCCGGTTCCGCCTACAGGCCAGCAAGATAAGGGAGCTGCTGGCTGACAAGATGCAGGAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGAGCAGAGGCTGCTGGAGGCAGAGCAGAGAGCAGAGAACGCTGAGACCCAGGTGGGTGTCATGGAAGAGAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTAAAACTATCCAATCTGAAGAATGTGGACTCTGAGGGGAGCCTGCACCGGAAATACCAAGAATTGCTGAAAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATAAAGGGCAAAGATGAGCTCATCAGCCAGCTAGAGGCTCAGCTGGAGAAGCAGAAGCAGATGAGGGCAGAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAGCAAAAACTGTTCAAGAAAAAGCTGCAAAGATCAAGGAATGGGTGACACTCAAGTTGGCAAAGCTTGAGATG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAGAATCAGCATCTGAAAAGCCATAATCAGCGCCTGGTGGAGCAGGTGGGATCCCTTCAAGATGCGCTAGAAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TATTCAGATAGCTCCTTCACGGAAGCTGCTGGTGCCCCCCTACGGAGCTGCAGAGCAGGATTCTGTCCCTTCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGCCGGGAATCCAGCCTATGGGCCAGGACAGTGGCTCCCAGGCCCAGGGTCTGAAGGCAGCTGTGCTTGCACCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCCCCAGGTGCCCTGCAGAGCAAGGACTCTGTTTCTGAAGCAGCAAGCCCCTTGGAGGATTCTAGTTCCAGCAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGTCCATTCTGGGGAAACAGTAGAGGCCAAGCCCCTTCAACCTCATCTGGGAAGAGAGAGCCCTCCCCACCAGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CATGCATGAAGCTTCTTACCTTCAGATGTAGTTCAGCTTCCTGGGGTGAGGGTCTGGTTACTGCTCAGAGAGGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATGCTCCCTGGGACAAAGACCTCTGCCAGGGAAGGTGGTCCTGGCAGCAGTCTGACCCTACCAAAGGTGCGGGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCCTGGCACCCCGCGGGACAGCATCCAGTTGGCCAAAAGGCACCACAGCCAGCCCCAGGTGGGCCATGGGCACT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTGGCCGTGTGGTGAACATTGAGACTGAGGCCTTCTCAGCCCTCCACCCCTCTGGCCTTCCTGAGCTGGAGTCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CGAGCTAGGTCCCGGGAGGAACCAGAGAAGATGGAGATGGAGGAGCCACCCCCAGCAGGGAAGAATGAGGAAAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGAGAGCCCAAAGGCCCTTGGAGCTGAGCTGGAGGAAGTGGAGCTGGGTAACAAGCCACCTACACCCCCGCTGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACCAGTTTTCATCCTGGGAGAGCCGGATCTATGCTGTGGCCACATCGGGCATGCGGCTCTCAGATATGTCTCCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGAAGTAATACTGCATGCTGCGCTTCAAGCCCTCCTGCCCTTGTTTCCCCTGGGTCTTTCTCTGGCCTGGTCTA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAAGAATGTCACTGTGCCTGTCTACACAGCACTGAAGGGGAGAGCTACACAGATCAGCAACATGCCCTTTATGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ACGAGTCCTCTGGGTCTGACGATGACTGCAGCTCTCAGGCGAGTTTCCGAATCTCGGTCCCCTCCTCTGAGTCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGGAAGACCAGCGGACTAGGCAGCCCCCGGGCCATCAAGAGAGGCGTCTCCATGTCCTCACTGAGCTCCGAGGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGACTACGCCATCCCCCCGGACGCCTGCTCACTGGACAGTGACTACTCAGAGCCTGAGCACAAACTGCAGCGCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCTCATCCTACTCCACCGACGGGCTGGGCCTGGGCGGGGAGTCACTGGAGAAGTCGGGCTACCTGCTGAAAATG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGGAGCCAGGTGAAGACGTGGAAGAGGCGCTGGTTTGTCCTGAGACAGGGACAGATTATGTACTACAAGTCCCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GAGTGATGTCATCCGGAAACCTCAAGGCCAAGTGGATCTGAACTCCCGCTGCCAAATTGTTCGAGGGGAGGGTT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CACAGACGTTTCAGCTCATCTCTGAGAAGAAAACCTACTACCTGACGGCCGATTCACCCAGCCTGCTGGAGGAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGGATCCGAGTACTCCAGAGCCTGCTGAAGGTGCAGGCCACCGGGCCTCCAGCTCTGCTTCGGGGTGGCACCAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCCCACCGTGAAGGGCTGGCTGACCAAGGTAAAGCATGGCCACTCCAAGGTGGTCTGGTGCGCTCTTGTTGGGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAATCTTCTACTACTATCGGAGCCATGAGGACAAGCTTCACGGAGCCTATGTATTCAGAGAGAGGAGACTCCCT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CATCCCCCACTGGCTCTCCCATTCATGGAAGACTGCTGTCCACAGCGACCCCTGGGCTGCCTGCCTGTGCGGGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGCGCACATAGAGGAAGTAGATCGATCCTGTGACTCAGACGAGGACTATGAGGCTGGAGGAACCAGACGGTTGC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TTTCCTCCCACTGCACCCTGGTGATCCACCCCACAGAGCACAGCCCCACCTACCTCCTCATTGGCACCAAGCAT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GAAAAGGATACGTGGCTCTACCACCTCACAGTGGCTGCAGGTGGCAGCAGTGCCAAGGTGGGCACTGCCTATGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GCAGCTCATTGGAAAACTGATGGATGGTGAAGGAGATCCAGATTCGCCGCTCTGGAGGCACCCCATGCTGTGCT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACAGCAAAGACGGCCTATACGCCTCCCTCACCACCCTGCCCTCTGAGGCCTTGCAGACGGAGGCCCTCAAGCTC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TTCAAGTCCTGCCAGCTCTTCATCAACGTGCCGGTGGAAGCTGCCTCGGTGGACTACCATGTGTCCCTGGCCCA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GACCGCACTGCAGGTCTGCCTGGTTCACCCCGAGCTGCAGAGTGAGATCTACTGCCAACTCATGAAGCAGACCA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GCTGCCGCCCACCTCAGAAGTACTCCCTCATGCAGTGCTGGCAGCTCCTCGCTCTGTGTGCTCCACTTTTCCTG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CCTCAGCATCACTTCCTCTGGTATGTCAAGCAGCAGCTCCAACGCCATGCAGATCCCAGAAGTGAAACTGGCCA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GTATGCCACCTACTGCCAGCGGGCAGTGGAGCGGACCCTGCGGACCGGGGAGCGGGAAGCCAGGCCATCGCGCA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TGGAAGTGGTGTCCATCCTGCTGCGTAACCCCTTCCACCACTCCTTGCCCTTCAGCATCCCCGTGCACTTTACC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AACGGGACTTACCATGTGGTTGGTTTTGACGGCTCTTCCACGGTTGATGAGTTCCTCCAGCGGCTGAACCAGGA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GATAGGCATGAGAAAGCCATCCCACTCTGGCTTTGCCCTCTTCACGGACGATCCCTCGGGCAGGGACCTGGAGC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 ACTGCCTGCAGGGAAGTGTCAAGATCTGTGATGCCATCTCCAAGTGGGAACAAGCCATGAAGGAGCTGCACCCC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GGAAAGTCTGAGGGTGGGACACGCGTCGTGAAGCTGATGTACAAGAACAGGCTGTACTTTCGCAGTCAAGTCAA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 AGGGGAGACGGACCGAGAACGGCTGCTCCTTGCCTCTCAAACCAGTAGAGAGATAGTGGCAGGGAGGTTTCCTA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TCAACAAGGAATTGGCTCTTGAGATGGCTGCCCTGATGGCCCAGGTAGAATATGGGGACTTGGAGAAGCCTGCC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CTGCCAGGCCCTGGAGGCACATCCCCTGCCAAGGCTCAGCATCTTCTCCAGCAGGTCCTAGACAGGTTCCACCC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CAGGCGCTATAGACATGGGGCCCCCGCTGAACAGCTGAGGCACCTGGCAGATATGTTGACCACAAAATGGGCAA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CATTGCAAGGATGCTCCCCTCCTGAGTGCATCCGCATCTACCTGACCGTGGCCAGGAAATGGCCTTTCTTTGGT 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 GCTAAACTTTTTGCTGCTCAGCCTGCCCAGCTGTCTTCCAAGGAGAACGCTCTGGTGTGGATTGCTGTGAATGA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GGATGGCGTCAGCATCCTGGACCACAACACTATGCAAGTGCACATCACTTACCCCTACTCTTCAGTGACAACGT 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 TTGGTGGCTGCAGGGATGACTTCATGCTTGTGATTAGATCTATCCCAGACAAGAGCTCTGGAAAAAGCCACATT 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 GAGAAGTTGATCTTCCGGATGGCTGCTCCCAAGAGCTAACCAGAGCAGAACACTGGGCCTCCTTTTCTCAGAAG 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 GGCACTGTGCATCTGAGAGGATCTCCAGACCAACAGGAGCCCACACCACTGGGCCTCTGAACAGCACAGTTATG 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 ATTCCCTTTGGATATTTTCTCCCAGATTGCAGAAGCTACCTTCATCATGGCCAGCTATATGAACCATTGCACTA 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 CAACTGTGAACCCCCCCACCAACCCACCCGGAGCCTGCCAGCTGTGGGAACTGGATGGACGACAGTTCTTTTCT 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 TCTGTTTCCTGTGCTACCAAGGGGCCAACGTTGCTGTGAATATTTCTCCTACCCGATTCCCCAACACCACTAGT 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 GCCTCTGGATTTAGAGATATATATCCTAGGGTATGATACTACTGTGACGGGTCTAACAGCCCCCGGCTACTCTT 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 GTTCTGTGAAATGTGTATTTTAGTCTCTGTGAAGCCTTTACTCTCTAGGTGCCTTATAATGTTTCAGGGCTCAA 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 CTTTTTAAAATCCAGACCCAGTGTTAAAACCATTTATTCCTTTTTTCATAAGAATAATGACTCCAGATGCTACC 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 TGATTCTAGACATAGACAGGGATGATCCACTGTTACTGAGGGCATCAGTGCTATAAGTTAAGGCTTTCTGCACT 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 GGTACTCTCAAGGAAGCTAATTTTCTTTCTGGGGGGGGCGGGGGACACAGTGTCACTATGTCACCCAGTCCACA 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 GGGTTCAAGCAATTCTCCTGCCTCAGCCTTCGGAGTGGCTGGGATTACAGGTGTGCGCCACCATGCCCGGCTAA 5032
Query 1 --------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGAT 54
|.||||||||.||||||.||.|||||||||||.|||||||||||||||||||||
Sbjct 5033 TTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGAT 5106
Query 55 CCGCCCACCTCAGCCTCC-------------------------------------------------------- 72
|.||||||.|..||||||
Sbjct 5107 CTGCCCACTTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCATCGCCCAGCCCAGAAGCTAATTTTTTA 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 ATATTGTATATGGTCTTATTTATACTTGAAGTTTTGTGAACGTCGCTAAACAGGATAGGACTAAAATTTCCAAT 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 TCTCCTACACTCTGTCAGAAGCCTAGAACTCACTAAACTGGGCTGCCTTTCCCAAATGGGAAAGGTGCTGACAG 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 AGTTGGAGAAAAAAGAATAGACTCATTTTTCCCCATTATTGGTATGTAGGCATTGGTACAGCCCCTTCTGGGGC 5402
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5403 AGTCTTTGCAGGATAACATGCTATACCTGCTAAGATTCAAGCTGTTTTCCTCACACTGGACTTTAGGCCAAACC 5476
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5477 CAGTACCACGCAATGTGCAAGCAAGGGCAGGAGGTAGGTCCAATCTGACCCCTCCCTGTCTCATTTTAATGACT 5550
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5551 GGACAGCGCTCGGTGAAGGCTGTGTTCACTGTAGTGGGCCATCATTTGTTTCCTTCTTCTTGTAAAAGACCAAG 5624
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5625 CAAATGCACTCTGCTTTTTGCTGCTGTAAGACCACCAAAAATGAGTCAGAAACACAGAAGACTATTTCAGGCAT 5698
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5699 GTGGGCCTGGATATGCTCCTTGAGACTTCTGGCAAACTTCTGCTGGGAATTAGTTTGAGGGTGAGGGTACATAT 5772
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5773 GTGACATTTGCCCTAGCCTAAGAGTAGCAGGTAAAAAAAAGTTTCTTTCATCTTTTGCCTTACTGATAATACCA 5846
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5847 TAATCCCCCTCAATTCAGACCTTCTGATTGAGTGCAGAGGAGACTAGACAGTCTCCTCTAGACAGGTTGTAGAC 5920
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5921 ACACCCTCCCCTAACAAAAACAAAACGAAAGAGTTCATACTCTGATTTTCCAACATCTAGGAAACTGAGTTTTA 5994
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5995 TTTCCTAGCTCTAAGGCAGCCTTACTATATGTCAGTAAAGTGCTGAAAACTGTATATTTAGCAGTAGCACCCAA 6068
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6069 AACCAAGCCTTTAACCCCAACAATGTGTGTATCTTTTGCACAGCAAAAACTGCGAGGCCAGAACTAGTTTATCT 6142
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6143 GAACACCTCAGCTGCTGTAAGCTTCTCCTCTCTCACCCCGTAAACTGACAAGCATGATGAAAAAAGAAGCACAT 6216
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6217 CCAAGTTTCTGCCTCTTTTAAATGTACTTGACTTTGCAAGGCAAGTAGTTTTACAGCCATTTCTGTTCACACTT 6290
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6291 TTCACCCCACAACTTGGGGATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGTTCCTGAA 6364
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6365 TAATTCCTGCAGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAA 6438
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6439 GGATAACATTATCTACCCAGAGAGTTTAGAAGAAAAGTAGGAGTCCAAAGGAAGAGTAAACAAGAATGGAGCTG 6512
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6513 TGTTCACACTGAATTTGGGGTCAATCTATTTCCCCCACCCTCTCTCCTCCCCAACCCTTCAGGAACCCTTTAGT 6586
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6587 TTATTAATCTTATACAGAAGAAACTAACTTAGAAACAAAGGATTCAATATTTGCTTATTTATTCTTTGTTAACA 6660
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6661 TGAGAGTCCCATGTCTGAAAACCAAAGTCCAATTTCTGTCTGGCCTTTTGTCTCATCCTTCTTGGCAAAAGTAG 6734
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6735 CTTTTGAACTGATATAAAAAAAAATGCTGAGTAACAGAAAAGTATTAATGTGCTTGACACCATGACTGAAATAC 6808
Query 73 -------------------------------------------- 72
Sbjct 6809 TATGATCTTGTTTGTCAATAAAAAGCAGCTATCTGTGAACCAGG 6852
