Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- XR_001750461.1
- Aligned Length:
- 6768
- Identities:
- 63
- Gaps:
- 6696
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTTTGTGCAGCGAGCCCGCGGGCACCCCTCCCGCTCCAGCCTCGCCCCGCCCCGCAGCCCACGACCCCTGCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGGGGAGGGGAGAACCGGCGGCAGCCCGGGACTCCGGCGAGAGCGACGCAAGGTCGGCTGCGGCGGCGGCCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGGCGCCCGTGTGCCCAGTGCGCGGCGGGGACGGCCGCGAGCTCGCTGGAGGGCTCCCCAGAATAATCCAGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTCGATTCCATCATGGCAGAACTCAAGGTGGAGGCGCCGGCCAGCGTAGACTGGCAGAAACGCTGCCTGACCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGAAACTCAGCTTTTCCGGTTCCGCCTACAGGCCAGCAAGATAAGGGAGCTGCTGGCTGACAAGATGCAGGAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGAGCAGAGGCTGCTGGAGGCAGAGCAGAGAGCAGAGAACGCTGAGACCCAGGTGGGTGTCATGGAAGAGAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTAAAACTATCCAATCTGAAGAATGTGGACTCTGAGGGGAGCCTGCACCGGAAATACCAAGAATTGCTGAAAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATAAAGGGCAAAGATGAGCTCATCAGCCAGCTAGAGGCTCAGCTGGAGAAGCAGAAGCAGATGAGGGCAGAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAGCAAAAACTGTTCAAGAAAAAGCTGCAAAGATCAAGGAATGGGTGACACTCAAGTTGGCAAAGCTTGAGATG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAGAATCAGCATCTGAAAAGCCATAATCAGCGCCTGGTGGAGCAGGTGGGATCCCTTCAAGATGCGCTAGAAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TATTCAGATAGCTCCTTCACGGAAGCTGCTGGTGCCCCCCTACGGAGCTGCAGAGCAGGATTCTGTCCCTTCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGCCGGGAATCCAGCCTATGGGCCAGGACAGTGGCTCCCAGGCCCAGGGTCTGAAGGCAGCTGTGCTTGCACCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCCCCAGGTGCCCTGCAGAGCAAGGACTCTGTTTCTGAAGCAGCAAGCCCCTTGGAGGATTCTAGTTCCAGCAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGTCCATTCTGGGGAAACAGTAGAGGCCAAGCCCCTTCAACCTCATCTGGGAAGAGAGAGCCCTCCCCACCAGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CATGCATGAAGCTTCTTACCTTCAGATGTAGTTCAGCTTCCTGGGGTGAGGGTCTGGTTACTGCTCAGAGAGGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATGCTCCCTGGGACAAAGACCTCTGCCAGGGAAGGTGGTCCTGGCAGCAGTCTGACCCTACCAAAGGTGCGGGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCCTGGCACCCCGCGGGACAGCATCCAGTTGGCCAAAAGGCACCACAGCCAGCCCCAGGTGGGCCATGGGCACT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTGGCCGTGTGGTGAACATTGAGACTGAGGCCTTCTCAGCCCTCCACCCCTCTGGCCTTCCTGAGCTGGAGTCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CGAGCTAGGTCCCGGGAGGAACCAGAGAAGATGGAGATGGAGGAGCCACCCCCAGCAGGGAAGAATGAGGAAAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGAGAGCCCAAAGGCCCTTGGAGCTGAGCTGGAGGAAGTGGAGCTGGGTAACAAGCCACCTACACCCCCGCTGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACCAGTTTTCATCCTGGGAGAGCCGGATCTATGCTGTGGCCACATCGGGCATGCGGCTCTCAGATATGTCTCCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGAAGTAATACTGCATGCTGCGCTTCAAGCCCTCCTGCCCTTGTTTCCCCTGGGTCTTTCTCTGGCCTGGTCTA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAAGAATGTCACTGTGCCTGTCTACACAGCACTGAAGGGGAGAGCTACACAGATCAGCAACATGCCCTTTATGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ACGAGTCCTCTGGGTCTGACGATGACTGCAGCTCTCAGGCGAGTTTCCGAATCTCGGTCCCCTCCTCTGAGTCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGGAAGACCAGCGGACTAGGCAGCCCCCGGGCCATCAAGAGAGGCGTCTCCATGTCCTCACTGAGCTCCGAGGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGACTACGCCATCCCCCCGGACGCCTGCTCACTGGACAGTGACTACTCAGAGCCTGAGCACAAACTGCAGCGCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCTCATCCTACTCCACCGACGGGCTGGGCCTGGGCGGGGAGTCACTGGAGAAGTCGGGCTACCTGCTGAAAATG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GGGAGCCAGGTGAAGACGTGGAAGAGGCGCTGGTTTGTCCTGAGACAGGGACAGATTATGTACTACAAGTCCCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GAGTGATGTCATCCGGAAACCTCAAGGCCAAGTGGATCTGAACTCCCGCTGCCAAATTGTTCGAGGGGAGGGTT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CACAGACGTTTCAGCTCATCTCTGAGAAGAAAACCTACTACCTGACGGCCGATTCACCCAGCCTGCTGGAGGAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGGATCCGAGTACTCCAGAGCCTGCTGAAGGTGCAGGCCACCGGGCCTCCAGCTCTGCTTCGGGGTGGCACCAA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCCCACCGTGAAGGGCTGGCTGACCAAGGTAAAGCATGGCCACTCCAAGGTGGTCTGGTGCGCTCTTGTTGGGA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAATCTTCTACTACTATCGGAGCCATGAGGACAAGCGACCCCTGGGCTGCCTGCCTGTGCGGGATGCGCACATA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GAGGAAGTAGATCGATCCTGTGACTCAGACGAGGACTATGAGGCTGGAGGAACCAGACGGTTGCTTTCCTCCCA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CTGCACCCTGGTGATCCACCCCACAGAGCACAGCCCCACCTACCTCCTCATTGGCACCAAGCATGAAAAGGATA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CGTGGCTCTACCACCTCACAGTGGCTGCAGGTGGCAGCAGTGCCAAGGTGGGCACTGCCTATGAGCAGCTCATT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GGAAAACTGATGGATGGTGAAGGAGATCCAGATTCGCCGCTCTGGAGGCACCCCATGCTGTGCTACAGCAAAGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CGGCCTATACGCCTCCCTCACCACCCTGCCCTCTGAGGCCTTGCAGACGGAGGCCCTCAAGCTCTTCAAGTCCT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GCCAGCTCTTCATCAACGTGCCGGTGGAAGCTGCCTCGGTGGACTACCATGTGTCCCTGGCCCAGACCGCACTG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CAGGTCTGCCTGGTTCACCCCGAGCTGCAGAGTGAGATCTACTGCCAACTCATGAAGCAGACCAGCTGCCGCCC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 ACCTCAGAAGTACTCCCTCATGCAGTGCTGGCAGCTCCTCGCTCTGTGTGCTCCACTTTTCCTGCCTCAGCATC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ACTTCCTCTGGTATGTCAAGCAGCAGCTCCAACGCCATGCAGATCCCAGAAGTGAAACTGGCCAGTATGCCACC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TACTGCCAGCGGGCAGTGGAGCGGACCCTGCGGACCGGGGAGCGGGAAGCCAGGCCATCGCGCATGGAAGTGGT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GTCCATCCTGCTGCGTAACCCCTTCCACCACTCCTTGCCCTTCAGCATCCCCGTGCACTTTACCAACGGGACTT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ACCATGTGGTTGGTTTTGACGGCTCTTCCACGGTTGATGAGTTCCTCCAGCGGCTGAACCAGGAGATAGGCATG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AGAAAGCCATCCCACTCTGGCTTTGCCCTCTTCACGGACGATCCCTCGGGCAGGGACCTGGAGCACTGCCTGCA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GGGAAGTGTCAAGATCTGTGATGCCATCTCCAAGTGGGAACAAGCCATGAAGGAGCTGCACCCCGGAAAGTCTG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AGGGTGGGACACGCGTCGTGAAGCTGATGTACAAGAACAGGCTGTACTTTCGCAGTCAAGTCAAAGGGGAGACG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GACCGAGAACGGCTGCTCCTTGCCTCTCAAACCAGTAGAGAGATAGTGGCAGGGAGGTTTCCTATCAACAAGGA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 ATTGGCTCTTGAGATGGCTGCCCTGATGGCCCAGGTAGAATATGGGGACTTGGAGAAGCCTGCCCTGCCAGGCC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CTGGAGGCACATCCCCTGCCAAGGCTCAGCATCTTCTCCAGCAGGTCCTAGACAGGTTCCACCCCAGGCGCTAT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AGACATGGGGCCCCCGCTGAACAGCTGAGGCACCTGGCAGATATGTTGACCACAAAATGGGCAACATTGCAAGG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 ATGCTCCCCTCCTGAGTGCATCCGCATCTACCTGACCGTGGCCAGGAAATGGCCTTTCTTTGGTGCTAAACTTT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TTGCTGCTCAGCCTGCCCAGCTGTCTTCCAAGGAGAACGCTCTGGTGTGGATTGCTGTGAATGAGGATGGCGTC 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 AGCATCCTGGACCACAACACTATGCAAGTGCACATCACTTACCCCTACTCTTCAGTGACAACGTTTGGTGGCTG 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 CAGGGATGACTTCATGCTTGTGATTAGATCTATCCCAGACAAGAGCTCTGGAAAAAGCCACATTGAGAAGTTGA 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 TCTTCCGGATGGCTGCTCCCAAGAGCTAACCAGAGCAGAACACTGGGCCTCCTTTTCTCAGAAGGGCACTGTGC 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 ATCTGAGAGGATCTCCAGACCAACAGGAGCCCACACCACTGGGCCTCTGAACAGCACAGTTATGATTCCCTTTG 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 GATATTTTCTCCCAGATTGCAGAAGCTACCTTCATCATGGCCAGCTATATGAACCATTGCACTACAACTGTGAA 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 CCCCCCCACCAACCCACCCGGAGCCTGCCAGCTGTGGGAACTGGATGGACGACAGTTCTTTTCTTCTGTTTCCT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 GTGCTACCAAGGGGCCAACGTTGCTGTGAATATTTCTCCTACCCGATTCCCCAACACCACTAGTGCCTCTGGAT 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 TTAGAGATATATATCCTAGGGTATGATACTACTGTGACGGGTCTAACAGCCCCCGGCTACTCTTGTTCTGTGAA 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 ATGTGTATTTTAGTCTCTGTGAAGCCTTTACTCTCTAGGTGCCTTATAATGTTTCAGGGCTCAACTTTTTAAAA 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 TCCAGACCCAGTGTTAAAACCATTTATTCCTTTTTTCATAAGAATAATGACTCCAGATGCTACCTGATTCTAGA 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 CATAGACAGGGATGATCCACTGTTACTGAGGGCATCAGTGCTATAAGTTAAGGCTTTCTGCACTGGTACTCTCA 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 AGGAAGCTAATTTTCTTTCTGGGGGGGGCGGGGGACACAGTGTCACTATGTCACCCAGTCCACAGGGTTCAAGC 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 AATTCTCCTGCCTCAGCCTTCGGAGTGGCTGGGATTACAGGTGTGCGCCACCATGCCCGGCTAATTTTTGTATT 4958
Query 1 ----------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCT 64
|.||||||||.||||||.||.|||||||||||.||||||||||||||||||||||.||||||.|
Sbjct 4959 TTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCTGCCCACTT 5032
Query 65 CAGCCTCC------------------------------------------------------------------ 72
..||||||
Sbjct 5033 TGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCATCGCCCAGCCCAGAAGCTAATTTTTTAATATTGTATA 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 TGGTCTTATTTATACTTGAAGTTTTGTGAACGTCGCTAAACAGGATAGGACTAAAATTTCCAATTCTCCTACAC 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 TCTGTCAGAAGCCTAGAACTCACTAAACTGGGCTGCCTTTCCCAAATGGGAAAGGTGCTGACAGAGTTGGAGAA 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 AAAAGAATAGACTCATTTTTCCCCATTATTGGTATGTAGGCATTGGTACAGCCCCTTCTGGGGCAGTCTTTGCA 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 GGATAACATGCTATACCTGCTAAGATTCAAGCTGTTTTCCTCACACTGGACTTTAGGCCAAACCCAGTACCACG 5402
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5403 CAATGTGCAAGCAAGGGCAGGAGGTAGGTCCAATCTGACCCCTCCCTGTCTCATTTTAATGACTGGACAGCGCT 5476
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5477 CGGTGAAGGCTGTGTTCACTGTAGTGGGCCATCATTTGTTTCCTTCTTCTTGTAAAAGACCAAGCAAATGCACT 5550
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5551 CTGCTTTTTGCTGCTGTAAGACCACCAAAAATGAGTCAGAAACACAGAAGACTATTTCAGGCATGTGGGCCTGG 5624
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5625 ATATGCTCCTTGAGACTTCTGGCAAACTTCTGCTGGGAATTAGTTTGAGGGTGAGGGTACATATGTGACATTTG 5698
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5699 CCCTAGCCTAAGAGTAGCAGGTAAAAAAAAGTTTCTTTCATCTTTTGCCTTACTGATAATACCATAATCCCCCT 5772
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5773 CAATTCAGACCTTCTGATTGAGTGCAGAGGAGACTAGACAGTCTCCTCTAGACAGGTTGTAGACACACCCTCCC 5846
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5847 CTAACAAAAACAAAACGAAAGAGTTCATACTCTGATTTTCCAACATCTAGGAAACTGAGTTTTATTTCCTAGCT 5920
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5921 CTAAGGCAGCCTTACTATATGTCAGTAAAGTGCTGAAAACTGTATATTTAGCAGTAGCACCCAAAACCAAGCCT 5994
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5995 TTAACCCCAACAATGTGTGTATCTTTTGCACAGCAAAAACTGCGAGGCCAGAACTAGTTTATCTGAACACCTCA 6068
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6069 GCTGCTGTAAGCTTCTCCTCTCTCACCCCGTAAACTGACAAGCATGATGAAAAAAGAAGCACATCCAAGTTTCT 6142
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6143 GCCTCTTTTAAATGTACTTGACTTTGCAAGGCAAGTAGTTTTACAGCCATTTCTGTTCACACTTTTCACCCCAC 6216
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6217 AACTTGGGGATCTAGCTGAGACATTTCTACCTCGAACAAGTCACATGTACCACAGGTTCCTGAATAATTCCTGC 6290
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6291 AGGGCTGGTGACAGACATAACAGCTCTGGTTTTATAATATCTTGGGTATCTCTAAGGCCAATAAGGATAACATT 6364
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6365 ATCTACCCAGAGAGTTTAGAAGAAAAGTAGGAGTCCAAAGGAAGAGTAAACAAGAATGGAGCTGTGTTCACACT 6438
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6439 GAATTTGGGGTCAATCTATTTCCCCCACCCTCTCTCCTCCCCAACCCTTCAGGAACCCTTTAGTTTATTAATCT 6512
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6513 TATACAGAAGAAACTAACTTAGAAACAAAGGATTCAATATTTGCTTATTTATTCTTTGTTAACATGAGAGTCCC 6586
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6587 ATGTCTGAAAACCAAAGTCCAATTTCTGTCTGGCCTTTTGTCTCATCCTTCTTGGCAAAAGTAGCTTTTGAACT 6660
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6661 GATATAAAAAAAAATGCTGAGTAACAGAAAAGTATTAATGTGCTTGACACCATGACTGAAATACTATGATCTTG 6734
Query 73 ---------------------------------- 72
Sbjct 6735 TTTGTCAATAAAAAGCAGCTATCTGTGAACCAGG 6768
