Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10261
Subject:
XR_001751322.2
Aligned Length:
5311
Identities:
63
Gaps:
5240

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TTTTTTTCTTTTTGATACGGAATTTCGCTCTTGCTGCCCAGGCTGGAGTGCAATGGTGCGATCTCGGTTCACTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGGCTCCCAAGTAGCTGGACTACAGGCACCCGCCA  148

Query    1  ----------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCC  40
                                              ||||||||||.||||.|.||||||||||||||.||.||||
Sbjct  149  CCACGCCCGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATATTGGTCAGGCTGGTCTCGAGCTCC  222

Query   41  TGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------------------------------  72
            ||||||||||||||.||.||||||.| |||||                                          
Sbjct  223  TGACCTCAGGTGATTCGACCACCTGA-CCTCCCAAAGTGCTGGGATTACAGGCGTGTGGCACTGCACCCTGACA  295

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  296  CAAATTTAACTTTTTAAAGGTCAGTTAACTCAGCACAAGAAGGCTACTTGATGACCTTAATAAAGTACTTTTTA  369

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  370  GTTAAATGCTAAGGGCCAGGTTAAAATGGATTAAAGAATGAGACCCAAAGGAACTGAATTAACAGCATATTTAA  443

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  444  CTTTCAGTAAGTTCTAATTCTTATCTACACCTAGGCCTTACCCTAGGCAATTCTCACCACACATCCTGGTAGTT  517

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  518  GGGTCGATTACATTTATTATGTTGTCTTTTTTGTAGAGACGGGGTCTCGCTATGTTGACCAGTCTAATGGACTG  591

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  592  CTCTGAGACGTTTGGCCTGAGGTGATCCTTCCAGGCAGGAGGATCACTTCAGGCCAGGAGACTGGGAACCAGCC  665

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  666  CAGTAGACTGGGCAACATAGCGAGACCCCAAGTTTAGTAAATGTGGGTGGCAGTGGACTCAAATTGTAGAATTG  739

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  740  GCACAGGTAAAAGCAATTATTCGCTTTTCAGAGGCACACTGTGTGGATGTGAGAACAGGCTGGCATTTCCGATA  813

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  814  ACAGGTCTGCGTGTTCCCAAGTCCTTGTATCCCACAACCTTCACGTAGACATCTTATCTAACTATGCTGTCCTA  887

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  888  CCCAACCTATAGCGTTCTTGCTCCCAGAGTCTAAATGGGAGCCCCAAACTAATTACTGTATAGTAGTCGAACTA  961

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  962  CACACCAGGCACTTCCCCGACAATCTACAACCCCATCCAAAGGGGTCAGAAACTAGTAACAAAATACCAGCTGC  1035

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1036  GAGCCTCTCCTTCCCCTAAAGAGATCTTATCAACTTGGCTGCACCTTCCCACCTCTAGCCTGCGGGAACAAATA  1109

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1110  TCCCAGGATCCCGGGCGGTTTCGATTGACGTTACTTCCGGGAAAAGTAACCTTGCATCGGCGGTTGCGGGCCTG  1183

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1184  GAAAGCTCTCGCGACATTTTCTCCTGCGAGATCTGCTTGCTCACTGTAGCGATGACATCCTCCTCCTCCTCCCC  1257

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1258  GCCGCCTTTCGGCAATCTTCGCCAGTCCCAGTCCCGACTAATCTGTACTCAGATGGCATGGATCAGGGTCTCCC  1331

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1332  CTCGAACCCCGGTTCGCACGGGGCGTCAGGTGGCAGCGGCGGGGTGCGAGCTGCGCGAGGCCGACGGCAGCGGC  1405

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1406  ACTACGGGTGGCCACGGGCAGGCGACGAGCAGTGAGTGTGGGCGGGGTGGGGGTAAGCCACCCGTGTAGCGGCT  1479

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1480  CGATTGTTCTGGCCTGGCTATGGCGCCTCTCCTCCCCCCCGCCATGGCTCCCCGTGTCCCTGCTCCGCTCCTCT  1553

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1554  CAGTGAGTGAAAGTGGCCGCCGCCGCCGCCGGCCCAGCGCCCGCAGCCGCCTCAGCGCCGCCGCCATCTTGGGG  1627

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1628  TCCCAGGAGCCGCGGAGGGAGCGAGCTAGGAGCGTCCACGCCCAACGCAGTCACCGTCCCACGGCCTCAGAGAG  1701

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1702  CGAACCGCGGCTCCACCGTCGGCGGGGCGACCCCCCCCTCCGGACCCCGCCCGCACCCCGCCCCCCCTCCGCCG  1775

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1776  CCGTCGCGGCGGCGGGGCCAGGCGGCCCGAGCCGTGCAGTCGGAGGTCCTTGTGCATGAAGACAGATTTGTTCT  1849

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1850  ATGGCCTCGGAGTTGGGTGCCAGGGATGATGGAGGCTGCACTGAGCTGGCAAAGCCCCTCTATCTTCAGTACTT  1923

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1924  GGAGAGGGCCCTCCGGTTGGACCATTTTCTGCGACAAACGTCAGCTATCTTCAATAGGAATATTTCTAGTGATG  1997

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1998  ACAGTGAAGATGGACTGGATGACAGTAATCCATTATTGCCCCAGTCTGGGGATCCCTTAATACAAGTTAAGGAA  2071

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2072  GAACCTCCAAATTCATTGCTTGGTGAAACTTCTGGAGCAGGCAGTTCTGGAATGTTAAACACATATTCTCTGAA  2145

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2146  TGGAGTTCTACAGTCAGAATCAAAATGTGATAAGGGGAATTTATATAATTTCTCTAAGCTGAAGAAAAGCAGAA  2219

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2220  AGTGGCTAAAGAGCATTCTGCTAAGTGATGAATCCAGCGAGGCTGATTCTCAGAGTGAAGACGATGATGAAGAA  2293

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2294  GAACTCAATCTCAGCAGAGAAGAACTTCACAACATGCTTCGACTACACAAATATAAGAAACTTCACCAAAATAA  2367

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2368  GTATAGTAAAGACAAGGAGTTGCAGCAATATCAGTACTACAGTGCAGGCCTGCTCTCCACATATGACCCTTTCT  2441

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2442  ATGAGCAACAACGGCACCTACTTGGACCCAAGAAAAAGAAATTTAAGGAGGAAAAGAAACTTAAAGCTAAGTTG  2515

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2516  AAAAAAGTGAAGAAAAAAAGACGAAGAGATGAAGAACTTTCCTCTGAAGAATCCCCTCGTCGCCATCACCACCA  2589

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2590  GACCAAAGTCTTTGCCAAGTTTTCTCACGATGCACCTCCCCCTGGCACTAAGAAAAAGCACTTATCCATTGAGC  2663

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2664  AGCTGAATGCTCGTCGCAGGAAAGTATGGCTCAGCATTGTGAAAAAGGAACTACCAAAGGCAAATAAGCAGAAA  2737

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2738  GCTTCAGCTCGTAACCTGTTTCTCACCAATAGCCGAAAGCTTGCTCACCAGTGCATGAAGGAGGTGCGTCGAGC  2811

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2812  TGCCTTGCAGGCCCAGAAGAACTGTAAGGAAACCTTGCCTCGTGCCCGCCGCCTCACCAAGGAGATGCTTCTGT  2885

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2886  ACTGGAAGAAATATGAGAAAGTAGAGAAGGAGCACCGCAAGAGAGCAGAGAAGGAAGCTTTGGAGCAGCGGAAG  2959

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2960  TTGGATGAGGAAATGCGGGAGGCCAAGAGGCAACAGCGAAAACTCAACTTCTTAATTACCCAGACAGAGTTGTA  3033

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3034  TGCCCATTTCATGAGTCGCAAACGAGATATGGGTCATGATGGTATCCAGGAAGAAATCCTAAGGAAACTGGAAG  3107

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3108  ACAGTTCTACCCAGAGACAAATCGATATAGGTGGAGGAGTGGTAGTTAACATCACACAGGAGGATTATGATAGT  3181

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3182  AACCATTTTAAAGCCCAGGCCCTGAAGAATGCTGAAAATGCTTACCATATTCACCAAGCTCGGACAAGGTCATT  3255

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3256  TGATGAAGATGCAAAAGAAAGTCGAGCAGCTGCCCTACGGGCAGCAAACAAGTCTGGCACTGGGTTTGGGGAGA  3329

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3330  GTTATAGCCTGGCTAACCCATCTATCCGGGCTGGTGAGGATATTCCACAGCCCACAATTTTTAATGGCAAATTG  3403

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3404  AAAGGTTATCAACTGAAAGGCATGAATTGGTTGGCCAATCTATATGAACAGGGTATTAATGGCATTCTTGCTGA  3477

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3478  TGAAATGGGCCTTGGTAAAACAGTACAGAGCATTGCCCTTCTGGCCCATCTGGCTGAGAGAGAGAACATTTGGG  3551

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3552  GACCTTTCTTAATAATTTCACCTGCGTCTACACTTAACAATTGGCACCAGGAGTTTACTAGATTTGTTCCTAAA  3625

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3626  TTTAAGGTGCTACCATATTGGGGAAATCCTCATGATAGAAAAGTCATCAGAAGGTTCTGGAGTCAGAAGACCCT  3699

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3700  CTACACTCAGGATGCCCCCTTCCATGTGGTTATTACCAGCTATCAGCTGGTGGTGCAGGATGTAAAGTATTTCC  3773

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3774  AGCGGGTCAAGTGGCAATACATGGTACTGGATGAGGCTCAGGCGCTCAAGAGTAGTTCCAGTGTTCGTTGGAAG  3847

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3848  ATCCTCTTACAGTTCCAGTGTCGGAATCGGCTTTTGCTAACCGGGACCCCAATTCAGAACACCATGGCAGAGCT  3921

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3922  TTGGGCTCTGCTGCATTTCATTATGCCAACATTATTTGATTCACATGAGGAATTTAATGAATGGTTTTCCAAGG  3995

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3996  ACATTGAGAGCCATGCCGAAAACAAATCTGCTATTGATGAGAATCAACTTTCTCGCTTACACATGATTTTGAAG  4069

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4070  CCATTTATGCTGAGGAGAATCAAGAAAGATGTGGAAAATGAATTATCTGACAAGATTGAGATTCTAATGTATTG  4143

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4144  CCAACTGACCAGCCGACAGAAGCTGCTATATCAGGCACTAAAGAACAAAATTTCCATTGAGGATTTATTGCAGT  4217

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4218  CTTCTATGGGCTCTACCCAACAAGCACAGAACACCACCAGCAGCCTCATGAATCTGGTCATGCAGTTTAGGAAG  4291

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4292  GTGTGTAATCACCCGGAGTTATTTGAACGGCAAGAAACTTGGTCTCCATTTCATATTTCCCTAAAGCCATACCA  4365

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4366  CATTTCAAAGTTTATCTACCGTCATGGACAGATCAGGGTCTTCAATCATTCACGAGACAGGTGGTTAAGGGTTC  4439

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4440  TTTCTCCATTTGCACCAGACTATATCCAACGGTCTCTCTTTCACAGAAAAGGTATTAATGAAGAAAGCTGTTTC  4513

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4514  TCTTTCCTTCGCTTTATTGATATATCTCCAGCAGAAATGGCAAACCTTATGCTTCAGGGACTTTTGGCCAGATG  4587

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4588  GTTAGCTCTTTTCCTGTCTCTGAAAGCCTCCTACAGGCTCCATCAGCTACGCTCCTGGGGAGCGCCAGAAGGGG  4661

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4662  AGAGCCACCAGAGATACCTGAGGAACAAGGATTTCCTTCTTGGGGTTAATTTTCCACTCTCCTTTCCAAACCTT  4735

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4736  TGCAGCTGCCCTTTGTTAAAGTCTCTTGTTTTCAGCAGCCACTGTAAAGCAGTGAGTGGCTACTCAGACCAGGT  4809

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4810  TGTCCATCAGCGGAGATCAGCTACCTCCTCGCTGCGTCGCTGCCTGCTCACTGAGCTGCCATCTTTTTTGTGTG  4883

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4884  TGGCCAGTCCACGAGTTACCGCAGTGCCATTGGATTCTTACTGCAATGACCGAAGTGCAGAATATGAAAGGCGA  4957

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4958  GTTCTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAATGGGGCCCCTGAACTGGCTGCAGACTG  5031

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5032  GCTAAATAGACGATCACAGTTCTTCCCAGAGCCAGCTGGAGGTCTGTGGAGCATCAGACCTCAGAATGGCTGGT  5105

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5106  CTTTCATCAGGATTCCAGGAATACATGGTTTACAGGAAGCATACCTACATGAGGCTTGATGGCTCATCCAAGAT  5179

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5180  CTCGGAGAGGCGAGACATGGTTGCTGATTTTCAGAACAGGACATCTGAGATTGTTAAGGAATCAAGATGTAATT  5253

Query   73  ---------------------------------------------------------  72
                                                                     
Sbjct 5254  CCTGCCATTTTAAGAAGTTACTAAATCTGCTTATCATAATTCAGATCTATGTGTCTG  5310

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