Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- XR_001751398.2
- Aligned Length:
- 3829
- Identities:
- 63
- Gaps:
- 3757
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AATCTTGGCGGGAAGGCGCCGGCCGCTAAGAAGCCGAAAGATGTCCAGGTCGGGCGCGGCGGCTGAGAAGGCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACTCCAGACAGCGACCCCAGATGAAGGTAAATGAATATAAAGAAAATCAAAACATCGCTTATGTGTCTCTGAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAGCACAGACTACAGTTTTAATAAAAACAGCTAAGGTCTATCTTGCCCCCTTTTCACTCAGTAATTACCAGCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGACCAGCTTATGTGCCCCAAATCCCTATCAGAAAAGAATTCTAACAATGAAGTGGCGTGTAAGAAGACTAAAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAAAGAAAACTTGCAGAAGGATTATACCTCCAAAGATGAAAAACACATCTTCCAAGGCAGAATCCACGCTGCAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AATTCATCCTCAGCTGTTCATACTGAAAGTAACAAGCTACAACCCAAGAGAACGGCAGATGCGATGAATCTCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGTTGATGTGGAAAGTAGTCAGGATGGAGACAGTGATGAAGATACCACACCATCCCTGGATTTTTCGGGATTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CACCCTACGAAAGGAAGAGACTGAAGAACATATCAGAAAACGCAGACTTTTTTGCTTCTCTTCAGTTGTCTGAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCTGCTGCAAGACTCCGTGAAATGATAGAGAAGAGACAGCCTCCTAAATCCAAAAGAAAGAAGCCTAAGAGAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAATGGGATTGGATGTAGAAGGTCAATGCGATTACTAAAAGTTGATCCTTCGGGAGTTTCATTACCAGCAGCTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAACACCGCCGACATTAGTAGCAGATGAAACTCCTTTGTTACCTCCTGGGCCTTTAGAAATGACTTCTGAAAAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CAAGAAGACAACAATGAACGATTTAAAGGATTTCTGCACACATGGGCAGGAATGAGCAAGCCAAGTAGTAAGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CACTGAGAAGGGATTATCTAGCATTAAAAGCTACAAAGCCAATTTAAATGGCATGGTCATTAGTGAAGATACCG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTTACAAAGTTACCACAGGCCCAATATTCTCTATGGCTCTCCATCCATCAGAAACTAGAACTTTGGTAGCAGTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGGGCCAAATTTGGGCAAGTTGGACTTTGTGATTTGACCCAGCAACCTAAAGAAGATGGAGTTTATGTTTTTCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCCCCATAGTCAGCCAGTTAGCTGTCTTTACTTCTCACCCGCCAATCCGGCCCACATACTGTCACTGAGCTATG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATGGCACGTTACGCTGTGGGGATTTTTCCAGGGCTATTTTTGAAGAGGTGTATAGAAATGAAAGAAGTAGCTTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCCTCCTTCGACTTCTTGGCAGAAGATGCCTCCACTTTAATAGTAGGACACTGGGATGGAAATATGTCACTGGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGATAGACGGACACCTGGAACTTCTTATGAGAAACTTACCAGTTCTTCTATGGGAAAAATAAGAACTGTTCATG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TCCACCCAGTGCATAGACAGTATTTTATCACTGCCGGATTGAGGGATACTCATATTTATGATGCAAGGCGATTG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AATTCCAGGAGAAGTCAGCCTTTGATTTCTTTGACTGAACATACAAAGAGCATTGCTTCCGCCTATTTTTCACC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCTTACTGGTAACAGAGTGGTGACCACATGTGCTGATTGTAATCTGAGAATTTTTGACAGCAGCTGTATATCTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTAAGATTCCGCTCCTCACCACCATCAGGCACAACACTTTCACTGGGCGATGGCTGACCAGGTTCCAAGCCATG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGGGATCCTAAACAAGAAGACTGTGTCATAGTTGGCAGCATGGCCCATCCACGACGGGTAGAAATCTTCCATGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GACAGGAAAGAGGGTGCATTCGTTTGGTGGAGAATACCTTGTCTCTGTGTGTTCCATCAATGCCATGCACCCAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTCGGTATATTTTGGCTGGAGGTAATTCCAGCGGGAAGATACATGTTTTTATGAATGAAAAAAGCTGCTGAGTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TTTGGTTTAGGAACATCAATTTGTTCAAATTGACCACTGTCTAAGGAGCCTAGTAATCGGCGTGCCTTAGTGTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTTATGTGGTAATGTGTTACATTTAGCAATTATAACATTGTTTTATTAATAAGACTATAAGAAGAGTGTACTTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TAGTAAGGGAGAAGTCTTGGAGGGTTGCTTCTGCAGGACGGGGAGGGAATTTGAGGGGAGGCTGAGGTGCCGTC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGGACTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATAGCGCGA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCTTGGCTCACCGCAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGACTCCTAAGTAGCTGGGATT 2294
Query 1 -------------------------------------------------ATGGGGTTTCTCCATGTCGGTCAGG 25
||||||||||..|||||.||.||||
Sbjct 2295 ACAGGCACCTGCCACCACGCCTGGCTATTTTTTTGTATTTTTAGTAGAGATGGGGTTTCATCATGTTGGCCAGG 2368
Query 26 CTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC--------------------------- 72
|||||||.||.|||||||||||||||||||.||||.||||.||||||
Sbjct 2369 CTGGTCTCGAGCTCCTGACCTCAGGTGATCTGCCCGCCTCGGCCTCCAAAAGTGCTGGAATTACAGGCGTGAGC 2442
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2443 CACCATGCCTGGCCATCAGAACTTGTAATCAAGACAGTATGTTGAGAAATTCTAACATTATAAATTACAAAGCT 2516
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2517 TTGACTATTAAAGTTTTTGTGATCTAATGATACAGTTTTGATTCTATAGTAATTTGTGGCTTATTTTATAGTTT 2590
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2591 ATAATGAATACTTATTTCTAGACTCATACACTGGAAGGGGACCCGGAAAGGTAATGTAACTCAGTGATTTTAAA 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 ACTTGATTTTTTTAACTGAGAACTTTTTTTGCCCCCTGCCTGTAGGTTAAGTCTTACGTGAAATGCCAAGATAA 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 TTGCTGAGCAGCTTTGGTTACCCAGGGCGGGGTCTGGGTCTGTCTGTACTTTGCCTTTACTCTAGATGGCTCCT 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 GAGACACAGGCAGGACTCCCAAGCACCGGGTTGGGATCTGCCCTGGTCCCGGCATTCCAGTATAAGATTGCCTC 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 AGACCTGTGTTTTTCAGACTGGGTTTTTGCTCTTCACATGAAATCAAGTTAGATGACAATGACTGGTGTTGAAA 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 AAAATGAAAAGGAAAGAATTTGTAAAGAACAGAAAATATATTTGATACCATGGGTAATGGATAAAGAAGTTAAA 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 GCTACTGCTTAGAATGAAGAAGGCCCCAGGCTTACCTGTCCCGATCTTTAAACTGTCCGAAGGAAATTCAATAG 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 CCTGTTAAGTGAATACCTTCATTCTTACTTGTATTTGGGGGAATATTATGAAATACTCACCACTTTTGGTATTT 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 TATGAAAATGTTTTCTTTTCAGAAGTTATGGTAATTTCAATGTGTTTGTTGTTGGGAGGGGAGCTGCCAAATCA 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 GTTACTAATATTACTGTGTGACATCTATCCAACTTTTTTCATTATTCTTCATTGCCAAATACTGAAAGACTTGT 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 AAATGGCTTTGGCAATATGTTTGAATTCTAAGAGGAAATATTTTCCCATAATTGTATATCAGAGAAATATAGTG 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 ATATACAATTTCCTTGAAAACCAATTTCTAAATAATTTTCTTCTCTGTAATCTAAGTGTAAAAAGGTTTAGTTT 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 TTTAATAGGTTTAGGTGTTTATAAGCAATAGTTCTCTATTTTCTAGTTGATATAAGTAGAAGAATTGACAAGTG 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 AGATGGAAATGTTAATTTATAAAGGGAAAGAAAAGCTAGGTGAGGTTGAGTTATAATTAAACTGTTCAGGAAAC 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 ATCGTAAAGGCTTTAGGCTCCCTTTTTCATTTCTATACCAATTAATCTCATGGGTTCTAGAGTGGTTAGTTCTA 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 CGGGAATTGTTTTTGTTTTTGTTTTTAAAGATGCTGAAAACTACTCTCAATCAAATTAGTACCATCATTTAAGC 3774
Query 73 ------------------------------------------------------- 72
Sbjct 3775 TTTGAATACTTGGCAGTAATTGCCTGGGCTCGTCAATAAATGTTAGCAAATTCTT 3829
