Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- XR_001751415.1
- Aligned Length:
- 4956
- Identities:
- 64
- Gaps:
- 4886
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATCCGTGGAAGGTAAAAGCTGCTTCCTGTTGGGGCATGAGTCCGGCGCGTGTCGGGTTTTGAGCTGCCGCGGTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGGGACTGAGATAAGGCAGCTCCAGCCCCTGGAAGGCCAGAGACTTGCCAGTGTCCCACTAGCGGGCTCTTCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAAGAATCCCCCCGGGCCCGCCGCAGCCAGGCGGCGGCCGGCAGAGGGCGCTGCTCGGGCATGGCGGAGGAGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCGGGGGCCTGGTTCGGCTTCGGTTTCTGCGGCTTCGGGCAGGAGCTGGGCTCCGGACGCGGGCGCCAGGTGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACAGCCCCAGTCCGCTGCGGGCGGGCGTCGACATCTGCCGCGTGAGCGCGAGCTGGAGCTACACCGCTTTCGTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACCCGTGGAGGCCGCTTGGAGCTGTCGGGCTCAGCCAGCGGCGCGGCGGGCCGCTGCAAGGACGCGTGGGCCTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGAGGGGCTCCTCGCGGTGCTGCGCGCCGGGCCGGGGCCGGAGGCGTTACTGCAGGTCTGGGCGGCCGAATCGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGCTGCGTGGGGAGCCATTGTGGGCCCAGAATGTGGTGCCCGAGGCCGAAGGGGAAGACGATCCGGCCGGTGAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCCAGGCTGGGAGGCTACCCCTGCTGCCCTGCGCCCGTGCCTACGTGAGCCCGCGGGCGCCCTTCTACCGGCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCTGGCTCCGGAGCTGCGGGCACGCCAGCTGGAGCTGGGCGCCGAGCACGCGTTGCTGCTGGACGCTGCTGGCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGGTGTTCTCCTGGGGCGGGGGCAGGCATGGACAGCTGGGCCATGGGACCCTGGAGGCAGAGCTGGAGCCACGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGTTGGAGGCGTTGCAGGGCCTAGTCATGGCTGAGGTGGCCGCGGGGGGCTGGCATTCTGTGTGTGTGAGTGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GACTGGGGATATTTATATCTGGGGCTGGAATGAATCAGGGCAGCTGGCCCTGCCCACCAGGAACCTGGCAGAGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATGGAGAGACTGTCGCAAGGGAAGCCACAGAACTGAATGAAGATGGTTCTCAGGTGAAGAGAACGGGTGGGGCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GAGGATGGAGCCCCTGCCCCCTTCATAGCTGTCCAGCCCTTCCCGGCATTACTGGATCTCCCCATGGGCTCAGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGCAGTCAAGGCCAGCTGTGGATCCCGGCACACAGCTGTGGTGACACGTGAGTGGGGCTGGGAGGCACTCTGCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCACTCGAGCTGGTGCCTACGGAAGGGGGTGTGGTCGACGGAAAAACTTCTGTCTTAAGGCTTCTGTGGCTCAT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACAGAGCAGCTACCTTGCTCAGTGGATAAGCCCCAACCCCCTTGTTGTTTCACAGTAGTTCCCCAGCCTGTCAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCCCAGAAGTTTCTTCCTTCTGGTGGGAGGCTGATGCTTTCTGTCCTCCCTGCACGGCCACAGACACATTCCCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCCCGCCGCCGCCTCTGACAGCAGGGACTGTCCAGTCTGGCATGGAAGACTGCGGCGCTCGGTAGCATGGCACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGGAAGATCCGCCACTTTTTCCCTCGGGATCCTCTGCCATGCCACGTGTGATCAGCCAGTTGTTAAGAGAATA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGTTGTTCCATGCCAGGCAGATCTCATGAGGATTGTAATATGCTAGCTGTGGGCTGTGCCAAGCTGGGCTGGAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGATGCCTTGCCAAAGAACCGTAGTGACAACTATCGATTGTCCTTTTGCTTTCAGGAACAGGGGAGCTCTACAC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTGGGGCTGGGGTAAATATGGACAGCTGGGCCACGAGGACACCACCAGCTTGGATCGGCCTCGCCGTGTGGAAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACTTTGTAGATAAGCAACTCCAAGTAAAGGCTGTCACCTGTGGGCCGTGGAACACCTACGTGTATGCTGTGGAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AAAGGGAAGAGCTGACATGTGTACGTATATGTATATGCAACACCTGTGAGACCCCCATTCAGGTCAAGGAAAAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CATTGCCTGCACCCCAAGGGCCCCATATTTGCCCCTCCCCATCACAGTCCTGCCCTTCACCCTCAAGCACGGTC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTAAACTTGTCTGCACTTTAGAAACACCTGGAGAGCATTGAAAACTCTGCTGCCTAAGGTCAGCATCAATCAAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ACAATGAAATCAATGAAACAATGAAACCAGAGCTTCTAGGTGTGTGGCCTGGATAGTGGTAGATTCAAAGCTCC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACCCACCTCATCCCAGGTACATTTGATGTGCAGCTGAGATTGGGGCACATTCCAGGTCATCGTCTTCTGTCAGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CATTTCCCTGCTTTCGTTTGAATTTTACCATTCTTGTATGCAGCCTTATACGACATAGTTGTGTTTGCTTTTGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GTGTTAGATAAATGGAATCCTGTGTATGTGCTTTTGTGTCGTTTTTGTCACTCAGCATTGTATAATCCATCCTT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GTTGGGTCCTGGAGTTCATTTTTAATGCTATATGGTGTTCTGTTGTATGAATAATACCTCAAGTGATACAGCCT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TGTTGATGGTCATTTTTATTGTTTCTGATTTTGGTCATTCCACATAATTCTTTGTGCAGTCTTCTGCACATGTG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CACAAGTTCCTTTGCAGAACATTGAGTTGAATTGCTAAGTCAGGAGATACCTTTAATTTTACTAGATAACTGTT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GCCCCCAGCAGGGTGGGGTCTACTGTGGCTAAAATGTCAGGTAGATGCACACTGGTTTTAATTGGCATTTCCCT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GGATACTGATGAGGTTGAGTAGCTTTTCATTTGTTTTGGATGGCTGGGCATGGTGGCTCACACCTGTAGTCCCA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GCACTTTGGGAGGCTAAGCAGGGAGATTGCTTGAGGCGAAGAGTTCATATGTTTATTGGCCACTTGGAGTTTTT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CTGTTGTCAAGTGCCTGTTCAAGTTTTCTGGCCTTTTAAAATGTTCTGTATTTTCCTTAGTGATTTTTCTTTTG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GATATTTCAGATACAAGTCTTTTGAGAGTTAGTATTCAGAGTATCTTCTGCTACAATGTAGTTTGTTTCAGTCT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CTCTTGGTATTACCAATTTTAATACTTAGGTGATGCTTACTCCATGCCAGGTAAGGCTCAAAGTGCTTTACAAG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TATCAACTTATTTTGATAAAATAAGCTTATCAGTAGTTTTCTTTATAGTTAAATTCTATTTGTGCATGTGTGTG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TCTGTGGTTTAGCAAATGTTTCCCACCCATGGGGTCTTTTTTATTGTGGTAAAATATACTGAACATAAAATTTA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TGTTCAATAAAAAACAAAAATTGTTTTTAACCATTTTAAGTACATAGTTCAGTGACATTATATGCATTCACTGT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TGTGCAACCGTCACCCCTATGCATTTCCAGAACTTTTTCATCATTCTATGCTGAAACTCTGTGCATTAAACACT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TAACTCGTCAGTCTCCCCTTCCCCAGCCCCAGGCAACCACAGTCCTAACCTTCTGTTCCTATGATACTGTAAGT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GCCTCATGTAAGTGAAATCCCATAGTATTTGTCTTTTTATGACTGGCTTATCTCACTTAGCAGCATGTCCTCCA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AGTTCATCCATGATGTAGCTTATGTATCTAGACTTCCTGCCTTTTAAAGGCTAAGATTCTGTTGTATGTATACA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CTGCGTTTTATTCATCCGTGCATTGGTGGATATCTGAGTTGTTCACTACAGTCAATAATGTTGCTGGGAACATG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GGTGTACAACTCTCTTGAGTCTCTGCTTTCAGTTCTTTTGGATATATACCCAGAGTGGAATTGCTGGATTGTGT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 GGTAATTCTAAATTTTTTTGAGGAACTGCCCTGTTTCCCACAGAGGCTGCATCATTTTACATCCCCACTGGAAG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 TGCACACAAATCCTAATTTCTCCACATCCGCGTCCACACTTGTTTTCTATTTCTGGTTAACAGCCATCCTAATG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GGTGTGAAGTGGTATTTCATTGTGGGTTTTTTTTTTTTTTTTTGGACAGGGTCTCTCTGTTGTCCAGGCTGGAG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TACAGCCTCCACCTTCTGGGCTTAAGCCATCCTCCCGGGTAGCTGGGGCTACAGGCACGTGCCACCACATCTGG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 CTAGTTTTTTGTATTTTTAGTAGAGATGGGGTTGTTGCATATTGCCCAGGCTGGTCTCAAACTGCTGGGCTGAA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GCGATCCACTTGCCTTAGCCTCCCAAAGTACTAGGATTATAGGCATGAGCCATCATGCCTGGCCAAGCCATTTT 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 TTAAAATGGACAAAAGTCAACAAAGACGACAGAAGGATAGCAAGTGAGCATATGAGAAGATGCTCTACATCATT 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 AGTCATTAGGGAGTTGTAAATGAAAACCATAGTGAGACACCACTCCATACACAGAATAACTAGAATTACATAAA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 GGCTGAACATACCAACTGTTGGTGAAGATGTGGAGAAACTGGAACCTTCATACATTACTGGTAGGAATGTAAAA 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 TGGTACAACTGCTTTGGAAAACAGTTTGGCATTTCTTCTTTTTTAAGATGGAGTCTTGCTCTGTTGCCCAGGCT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 AGAGTGCAGTGGTGCAATCTCAGCTCACTGCCACTTCCGCCTCCTGAGTTCAAGGAATTCTCCTTCCTCAGCCT 4514
Query 1 -----------------------------------------------------------------ATGGGGTTT 9
|||||||||
Sbjct 4515 CCTGAATAGCTGAGATTACAGGTGTGTGCCACCACAGCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTT 4588
Query 10 CTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC----------- 72
|.||||||.||.|||||||||||.|||||||||||||| ||||||.||||||||.|||||||
Sbjct 4589 CACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTC--GTGATCTGCCCACCTTAGCCTCCCAAAGTGCTGG 4660
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4661 GATTACAGGCGTGAGCCACCATGCCCGGCCCAGTTTGGCATTTCTTAAAAAGTTAAGTGTACACATACCATAGA 4734
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4735 TGTGATCCAGCCATTTCACTCCTAGGTATTTATCCAGAAAAAAAAATATATCCATACAAAGACTTGTACATGAA 4808
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4809 TGTTTATAACAGCCTTGTTTTTAATAGCCAAAAACTGGAGAAAAGCCAAATGTGAAAAATAAACCTAACAGGCG 4882
Query 73 ------------------------------------------------------------------------ 72
Sbjct 4883 AATAAACTGGTATATCAACACCATGGAATACTAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4954
