Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10261
Subject:
XR_001753473.2
Aligned Length:
3085
Identities:
64
Gaps:
3013

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TAAATAAATAAAAATAAAATAAAAATAAAAAGACTAGTAGGAAATACATGATTTGGAAATAAAAAATATTCACT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGATTGATGATGCTAATTGGCTTTTTACAAACCTAGGAAGAAAAATATGTTGCAAACATGGAGGAAAGATGATG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCCTCCTTCAACAGAACTATGAGTTGTCCAAGATTTCACAAAGTTCTTCAAGCATGGCATTTGATGATGAGCCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TAAGATGACTTGAGCCTCACGTCAACTCTCTTTGCTACACGCCCCTCTTTGGAGACCACCACTTCATGCAATGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGAGTGACATTAGGGCTGAACTTTAAGAAAGAGAACTCTGACAGTAATGAGAAGACAGAAAAAGAGAATGACCA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GATATCCAAAATGGGATCGTAGCATCGAACATGAGAAGGCCATGCATAAGATGGGGTAGGTCCAATCAACAAAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTTGAAAAAAGGTCAGCTTTGGAGTGGTCTGAAAAGGGAGACAAAGGAGGAGACAGAATTCTGGATGATTTCAC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGTAACAATCCTGAGTGACTTGGAGGATATAATAGTATTAACTAAAAAGGAAAATGCACAAGACAGCAATTTGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGGAAGGACATTTAGATGAAGAGATCCTTGAGAAATACATGCATTTAAAAGACAAGTGGGAGAGAAACTAATGA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGGAGCTGAAAATGGCCAATGACACTGGAAAAGAACGACGACAGTAAAGTGTCCTAGTAGCCAAGGGAAGAGAG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AAAGCACTTTTTAAAGGATGAGATGATCACTTGTGTCAACTTCTGTCAATAATTAAAGGAGACAAGGGACAAGA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TGACATCCGTGGATATGGCAAATAGCCAATAATAATGAAAGCTAGCATCACATCTGCTGCATGCTTGTCACATG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CCAGGCACACCACTTCAAGAGTTGTACAAGTAAGAACCCATTTCATCCCCAAGAACCCTAGGACGTAAGTGTGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CTAGCATCCCCATTTTGGTGCTCAGCCTCTCGAGTAGCTGGGCTTACAGGCATGCGCCACCAGGCCCAGCTAAT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGATCTCGAACTCCTGACCTCAGGTGATC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CACCTGCCTTGGCCTCCCTTGTACAAGTAAGAACCCACTTCATCCCCAAGATGAACGTTAAGTGTGACTAGCAT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CCCCATTTTGGTTCATCCCCAATTTCATTTCATCCCCAAGAACCATAGGACATAAGTGTGACTAGCATCCCCAT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TTTGGTAACCAACAAGAAAATTAAATCCATAATAAGGAAGAGGCAGAACCCAAAGTGGATGGGGCTGAGGACAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ATGAAAGGTGAGAAAGAATAATCTGCCTATAAATGAACAGAGGTATAAGAAAACAGAACAGCAGCTGCAGGTAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AAATGGTTTTGTTTGTTTGTTTGTTTTGTGTTTTTTTGGTTGTTGTTGTTTTTTTTTTTTTTTTTTTTGAGATG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GAGTTTCACTCTTGTTGCTCAGGCTAGAGAGCAATGGCTTGATCTTGGCTCACTGCAACCTCCGCCTGCCGGGT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TCAAGCGATTCTTCTCCCTTAGCCTCCCAAGTAGCTGGGATTATAGGCATGCACCACCACGCCCGGCTAATTTT  1628

Query    1  ----------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGC  58
                            ||||.||||||||||||.|||||||||.||||.|||||.|||||||||||||||.|.|
Sbjct 1629  TGTATTTTCAGTAGAGATGGAGTTTCTCCATGTTGGTCAGGCTAGTCTTGAACTGCTGACCTCAGGTGATACAC  1702

Query   59  CCACCTCAGCCTCC------------------------------------------------------------  72
            ||.|||||||||||                                                            
Sbjct 1703  CCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCACCCAGCTTGATTTTTAAGACAGAAAC  1776

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1777  TATTTGAGCATTTAAGCGTTTACCAACTGAAGAGACAGAATCTAGGTCTGCCCCATAGAAAAAAAAATCTCTGG  1850

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1851  TGCTACTGGGAAAAGTCACGAAGACAGAGGTATGATGTCAAAGAGTCCAGAAAGTAGACAGAGAAAGAAATACA  1924

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1925  GTAGAGAATAGCATAGTGTCACCAAACAATAGTGTCACAGCACCATGGACTGACTGACTCTGACAGTGAGAAAA  1998

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1999  CTAAAAAAGAGGGACTGAGAAAGAGTAAGATCTGAGAGGAATCAGACAGAAATAGTAGCTGTGTAGCAGTCTCG  2072

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2073  GAGTTCCTTCCATCCCAAAACAAGGGTGCGATGAGCGACAGCAGTTCAGTACAGGCTGCAAAAGGCTGAATGAG  2146

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2147  GTGTTCGCATGACTTGCTGCACGGGAGACTAGAAAACCTGGCAAAAGGTAGAGTCCAGGGCTGAAGACAGCAGA  2220

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2221  TGTCCAGGGCCTACTCAACCTATAGGAAAAGCACTGGGTGATCTTCCCCTGCTTTTTGGTAGCGCCCTGCTTCC  2294

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2295  TCCCGAGTTCCACCGGAGGTCAGAGAACACAGTTTCAGGTTTCACACTATATACTTATTTCAGAAGCATGCAGA  2368

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2369  GTTATGCAGAAAAAAGGACACTCAAAGAGCAGTAGAACAGACAAGTTACTGCAACCACTTTAGCTGCACAGGTT  2442

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2443  GGCTACTTCTCTACACAGCTTGGGAGCTCATGCATAGCCCGGAGGGAGAAGTGATTGCTAGAGAACAAAAAAAT  2516

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2517  TAGTAACTGAGTCATACGGGGAAAATTTCTGGATAAAAATTTTAATTGGCTAGGTGGATCCTTAGACTGGTAGA  2590

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2591  CTTTGTGGATTTAGCTGCAAAGTGTATTTAAAGGAGTGTTAAAAAGTAACAACTGTTGTTTTAGATATTTTACA  2664

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2665  ATTTATATTTCTAGGATAAAAACACTAAGAACTCTTTTCCATAAACACCTCTATTGCAACCATTATGGTAAAAT  2738

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2739  TAAAAAATAATCAATATTTTAAAATGAATTATATACATGCAATAGAGGTATTTCCTTTGAGCAATTTATATCCT  2812

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2813  ACTTAGATTAATCATAAAAACCAAGGTCGCAAAATTAAAGAATTGTTCTAATTTTTAAAATTTAAATTCAAAGC  2886

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2887  ATAAATCTACATGAAAATCACGTAAAATCAAGAGAACAGGTAGGGCATGGTGGCTCACACTTGTAATCCCAGTA  2960

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2961  CTTTGGGAGGCCAAGGCAGGTGGATCATTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCT  3034

Query   73  ---------------------------------------------------  72
                                                               
Sbjct 3035  CGTCTCTACTAAAAATGCAAAAATTAGCTGGGCATGGTGGCACACATCTGT  3085

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