Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10261
Subject:
XR_001753680.1
Aligned Length:
3479
Identities:
63
Gaps:
3407

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGCGGCCCGCGGCCTCAGCTCTCTCTGCTTCCCCAGGATGCGGGCTCCGGGTGCGGGCGCGGCCTCGGTGGTCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGCTGGCGCTGTTGTGGCTGCTGGGGCTGCCGTGGACCTGGAGCGCGGCAGCGGCGCTCGGCGTGTACGTGGGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGCGGCGGCTGGCGCTTCCTGCGCATCGTCTGCAAGACCGCGAGGCGAGACCTCTTCGGTCTCTCTGTGCTGAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCGCGTGCGCCTGGAGCTGCGGCGGCACCAGCGTGCCGGCCACACCATCCCGCGCATCTTTCAGGCGGTAGTGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGCGACAGCCCGAGCGCCTGGCGCTGGTGGATGCCGGGACCGGCGAGTGCTGGACCTTTGCGCAGCTGGACGCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TACTCCAATGCGGTAGCCAACCTCTTCCGCCAGCTGGGCTTCGCGCCGGGCGACGTGGTGGCCATCTTCCTGGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGGCCGGCCGGAGTTCGTGGGGCTGTGGCTGGGCCTGGCCAAGGCGGGCATGGAGGCCGCGCTGCTCAACGTGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACCTGCGGCGCGAGCCCCTGGCCTTCTGCCTGGGCACCTCGGGCGCTAAGGCCCTGATCTTTGGAGGAGAAATG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GTGGCGGCGGTGGCCGAAGTGAGCGGGCATCTGGGGAAAAGTTTGATCAAGTTCTGCTCTGGAGACTTGGGGCC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CGAGGGCATCTTGCCGGACACCCACCTCCTGGACCCGCTGCTGAAGGAGGCCTCTACTGCCCCCTTGGCACAGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TCCCCAGCAAGGGCATGGACGATCGTCTTTTCTACATCTACACGTCGGGGACCACCGGGCTGCCCAAGGCTGCC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ATTGTCGTGCACAGCAGGAAACATCATCGGCGTGGGGCAGTGTCTCATCTATGGGCTGACAGTCGTCCTCCGCA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AGAAATTCTCGGCCAGCCGCTTCTGGGACGACTGCATCAAGTACAACTGCACGATCAATGGAGTCAGACACTGT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CGCCTTTTGTGTCTGGTGGTTCAGTACATCGGGGAGATCTGCCGCTACCTGCTGAAGCAGCCGGTGCGCGAGGC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GGAGAGGCGACACCGCGTGCGCCTGGCGGTGGGGAACGGGCTGCGTCCTGCCATCTGGGAGGAGTTCACGGAGC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GCTTCGGCGTACGCCAAATCGGGGAGTTCTACGGCGCCACCGAGTGCAACTGCAGCATTGCCAACATGGACGGC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AAGGTCGGCTCCTGTGGTTTCAACAGCCGCATCCTGCCCCACGTGTACCCCATCCGGCTGGTGAAGGTCAATGA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GGACACAATGGAGCTGCTGCGGGATGCCCAGGGCCTCTGCATCCCCTGCCAGGCCGGGGAGCCTGGCCTCCTTG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TGGGTCAGATCAACCAACAGGACCCGCTGCGCCGCTTCGATGGCTATGTCAGCGAGAGCGCCACCAGCAAGAAG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ATCGCCCACAGCGTCTTCAGCAAGGGCGACAGCGCCTACCTCTCAGGTGACGTGCTAGTGATGGATGAGCTGGG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CTACATGTACTTCCGGGACCGTAGCGGGGACACCTTCCGCTGGCGAGGGGAGAACGTCTCCACCACCGAGGTGG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGGGCGTGCTGAGCCGCCTGCTGGGCCAGACAGACGTGGCCGTCTATGGGGTGGCTGTTCCAGGAGTGGAGGGT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AAGGCAGGGATGGCGGCCGTCGCAGACCCCCACAGCCTGCTGGACCCCAACGCGATATACCAGGAGCTGCAGAA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GGTGCTGGCACCCTATGCCCGGCCCATCTTCCTGCGCCTCCTGCCCCAGGTGGACACCACAGGCACCTTCAAGA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TCCAGAAGACGAGGCTGCAGCGAGAGGGCTTTGACCCACGCCAGACCTCAGACCGGCTCTTCTTCCTGGACCTG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  AAGCAGGGCCACTACCTGCCCTTAAATGAGGCAGTCTACACTCGCATCTGCTCGGGCGCCTTCGCCCTCTGAAG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CTGTTCCTCTACTGGCCACAAACTCTGGGCCTGGTGGGAGAGGCCAGCTTGAGCCAGACAGCGCTGCCCAGGGG  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TGGCCGCCTAGTACACACCCACCTGGCCGAGCTGTACCTGGCACGGCCCATCCTGGACTGAGAAACTGGAACCT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CAGAGGAACCCGTGCCTCTCTGCTGCCTTGGTGCCCCTGTGTCTGCCTCCTCTCCCTGCTTTTCAGCCTCTGTC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TCCTTCCATCCCTGTCCCTGTCTGGCCTTAACTCTTCCCTCTTTTTCTTTTCTTTCTTTCTTTCTTTTTTTTTT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  AAGATAGAGTCTCACTCTGCTGCCCGGGCTAGAGTGCAGTGGTGGGATCTCGGCTCACTGCAACCTCTGCCTCC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TGGGGTTCAAGTGATCCTCCCACCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCGCCACCACGTCCAGCT  2368

Query    1  ----------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTG  52
                                  |.||||||||.||||||.|||||||.||||||.|||||||||||||||||||
Sbjct 2369  AATTTTTATATTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGTTGGTCTTGAACTCCTGACCTCAGGTG  2442

Query   53  ATCCGCCCACCTCAGCCTCC------------------------------------------------------  72
            ||||||...||||.||||||                                                      
Sbjct 2443  ATCCGCTGGCCTCGGCCTCCCAGAGTGCTGGGATTATAGGCGTGAGCCTCTGGCCCGGCCTTTCCTTTTTCCTC  2516

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2517  TCCTCTCCTGCCGAGAGTGGAACACGCGTGTCCTGGGAGCTGCATCTTGTGTAGGGTCCAGCTGCTTTTGGGGA  2590

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2591  CTGCAGGAATCATCTCCCCTGGGCCCTGGACTCGGACTGGGGCCTCCCCACCTCCCTCTCGGCTGTGCCTTACG  2664

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2665  GAGCCCCGATCCAGGCCTCCTGTGGCTGTTGGGTTCCAGATGCTGCAGCTCCATGTGACTTCCAAGCAGGCCCT  2738

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2739  CCGCCCTCCCTGCTGAATGGAGGAGCCGGGGGTCCCCCAGGCCAACTGGAAAATCTCCCAGGCTAGGCCAATTG  2812

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2813  CCTTTTGCACTTCCCCGTTCCTGTCACATTTCCCCAGCCCCACCTTCCCCTCCTGATGCCCTGAAAGCTTCCGG  2886

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2887  AATTGACTGTGACCACTTGGATGTCACCACTGTCAGCCCCTGCCTTGATGTCCCCATTTAGCCATCTCCATGGA  2960

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2961  GCTCCTGCTGGAGGGCCCTGAACCCTGCACTGCGTGGCTGCCCAGCCAGCTGCCTCCTGTCCTGGGAGGAGGCC  3034

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3035  TCCTGGGTGTCCTCATCTGGTGTGTCTACTGGAGGGTCCCACAGGAGAGGCAGCAGAGGGGTCAGGGGAGGTCT  3108

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3109  CCTGCCGGGGGTTGGCCTCTCAAGCCTCAGGGGTTCTAGCCTGTTGAATATACCCCACCTGGTGGTGGCCCCTC  3182

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3183  CGATGTCCCCACTGATGGCTCTGACACCGTGTTGGTGGCGATGTCCCAGACAATCCCACCAGGACGGCCCAGAC  3256

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3257  ATCCCTACTGGCTTCGCTGGTGGCTCATCTCGAACATCCACGCCAGCCTTTCTGGGGCCGGCCACCCAGGCCGC  3330

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3331  CTGTCCGTCTGTCCTCCCTCCAGCAGCACCCCCTGGCCCCTGGAGTGGTGGGGCCATGGCAAGAGACACCGTGG  3404

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3405  CGTCTCATGTGAACTTTCCTGGGCACTGTGGTTTTATTTCCTAATTGATTTAAGAAATAAACCTGAAGACCGTC  3478

Query   73  -  72
             
Sbjct 3479  T  3479

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