Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- XR_001755381.2
- Aligned Length:
- 5130
- Identities:
- 64
- Gaps:
- 5058
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGTGTCCAGGAGTCTCTCTGCTGCCAGCCCCGCCCAGACTCCAGGCAGGTTCTCGTTGCTATGGTGATCGCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGCAAGCTGGATGCTTGGACGCGCCGCTGCCAGTCCAACGCAGACCCCGCCCACGACGTCGACGATTCGTGTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCCGCAGGTCCCGCGTGGCTCTCGTTGCCATGGTGATCGCCGCCGCTGGCTCAGGCGGACCAGGCCGCGCGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCCCAGCTTTCACAGCCATCGCTGACTGGGAGCAGGAGACCCCTCCCCACTCTACTTCCACTGCCTGAGCTGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCATGCCTCACAGCCCAGTAAGGACTGTGGAAGAATGAGGTCCTCCCTGACACCTTTGGGGCCCCCTGTGAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGCGACCGTGTCATCGCCAGCTTCCCTAAGTGGTACACGCCGGAAGCCTGTTTGCAGCTCAGGGAGCACTTCCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGGGCAGGTCAGCGCTGCCTGCCAACGCAGGAACACGGGGACTGTCGGGCTCAAACTCTCCAAGGTGGTGGTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTGGCGATCTCTACGTGGGGAAGACCAGCCTCATCCACAGGTTTTGCAAGAATGTTTTTGATCGAGACTACAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCACCATTGGGGTGGACTTTGAAATTGAGCGCTTTGAGATTGCTGGGATTCCCTATAGCCTCCAGATCTGGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACAGCTGGGCAGGAGAAGTTCAAGTGCATCGCATCTGCCTACTACCGGGGTGCCCAGGTGATCATCACGGCCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTGACCTCACTGACGTGCAGACCCTGGAGCATACCAGGCAGTGGTTGGAGGATGCTCTGAGGGAGAACGAGGCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCTCCTGCTTCATCTTCCTCGTGGGAACCAAGAAGGACCTTCTGGCGAGAACGTGAAGGCATTCTTCAGCCGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTAGCCGCCCTGGCATTCGAGCAGTCGGTGCTGCAGGACCTGGAGAGGCAGAGCAGTGCCCGGCTCCAGGTCGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAATGGAGACCTAATCCAAATGGAAGGGAGTCCGCCCGAGACCCAGGAGAGCAAGAGGCCCTCCAGCCTGGGCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCTGCTAACTGGGGCCTGCGTGGAAGGCCTCCGCTCCCTGCACACACACGGACAGGAATTTCCGTGACTGTGGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTGGAGACTGGAGCCCAAGCTCTGCAGCGTGTCGCCCTCAAGCTGTAGGCCCATGTTCCAGTCCCTCCACCCAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCACCGGGCTCAGCTCCAGGGCACAGTCACTTGTCCGTTGCAGGTTGGGCACTAGAAAAGGCCCCCACTGGCTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCTGGGAGCCCCACACCACCGGGCCAGTGCAGGCACTGTGGTGATCCCATAAAAGGCCAGTCCATTTGCAGGGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CATCAGACAGTCACCTTTGGCCTCAAGAGGCCTCAGAACTGCAAACTCCTGCGTCGGTCTATACTACTCGGCCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGCCCACATCAGCAGTCAACCCTGCACTCTTTCCCAGCGATCTTGGATGTGTCCCCAGGATCCGTCACAGTGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCCAGGCAACCTGGACTTGTCAAAGTCAGCACCTGAAGGAGAGGCCACCTGCCATTCCCCCTGGGAGTTTTCTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTGTCAGCAGGACTTATGGTTCTGGGTCTCAGAGCTTCAGGCCTCACTGTCCTTCTGCCACGGATGCTCAAGGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCCTGGGCAGACCAGCACCTCTGGAGGACAATGGACAAAATGTCTCTTAGACCTGTTCTGGCTGAAGGGCTATC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCTGGCACCTCTGAGATCCCTAGGTCCTGCCCTCCTGGTCCGTGGGCCAGGATGTGCAGAACAACCACTCAGGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTTTCTGGCCCACCTGGACAGTGCATTTACCTGTGTGCTGCGGGAGGCAGACTGCACAGCTGTCCTAGGGTAAC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCACTCTGCAGCCCTTGAACATGGCACTGCCCTCCTCTGGCACTCATGCTGGGCCTGTGCCCACTGCTGCCTCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCATCCCTCTCTCATTGGCCTATACATCTCTTAGGACCTTTGTAATGGTGTCCATGCACCTTTAGAGGACTTCA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAGGCCCTGCCAAGTCTAGCATGTTCCTGTCTCCAACACCGCCTCCTGCACATGCAGAGCAGACAGAAATACCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CACACATTCCCCAGCCTCTCTGCCCAGTATGCTCATCCACAGGGTTTTCTCACTGCTATGAACCAGCCCCACAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCCCAGGCCCCTGTCACCTGGCTATGCCCACTCATCCCACCCGTCTCGTGCTGTTGCTTCCCGTAGATGGCGAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CACCTTGCAGGCAGCCTTCTGATCAGTACTGCTCTCCTAGGGCCTGGCACACTGCAGCTGCCCTGTAAATGTTC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGCTCAGCGATTGCCAAATACCAGTTAGGGAAGAACACTGGCATCTTTTTCTATTCATTCCCCCTTCAACATAT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTTTTGTAGTTTTTTATATAAATGACTTTTTTTTTTTTTTGAGATGGAGTTTCACCCTTGTTGCCCAGGCTGGA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GTGCAATGGCGTAATCTCGGCTCAGTGCAACCTCTGCCTCCCAGGTTGAAGCGATTCTCCTGCCTCAGCCTCCC 2516
Query 1 -------------------------------------------------------------ATGGGGTTTCTCC 13
|||||||||||||
Sbjct 2517 AAGTAGCTGGGATTACAGGCATGCACCACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTCTCC 2590
Query 14 ATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC--------------- 72
||||.||||||||||.|||.|.||||||||.|||||||||.|.|||||||||.||||||
Sbjct 2591 ATGTTGGTCAGGCTGCTCTCGGACTCCTGATCTCAGGTGACCTGCCCACCTCGGCCTCCCGAAGTGCTGGGATT 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 ACAAGGGTGAGCCACCATGCCCGGCCATAAATGATTTTATTCATTTTTATGTTTTCTTTTGGGCGGCGGGATGG 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 AGTCTCTGTCACCCAGGCTGGCGTGCAATGGCACGATCTTGGCTCACTGCAAGCTTCCCCTTCCGGGTTCATGC 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 CATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACGTGTGACCATGCCGGGCTAATTTTTTATAT 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 TTTTAGTAGAGAGAGGTTTCACCGTGTTAGCCAGGATGGTCTCGATGATCTGACCTCGTGATCTGCCCGCCTCG 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 GCCTCCCAAAGTGCTGGGATTACAGGCCTGAGCCACCGCGTCCGGCCTCCATAAATGACTTTTAAAGGGGTTGT 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 ATGTTTAGTGTGAACAAAGACAGTACAAAGCATATAAAATACAAGGTGAAAGCCCCCCCCCCGCCACATTAGCT 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 GCGCCCCTGAAGTGTCTCCAGCAGAAGAGATGGATGAATGGAAGGACACACAGATGGACAGAGAGCAGGAAAGA 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 CTGTTAGCTCTGCTAACAGTCAGGACTATTCCTTCTGGACTCTGTGCCTTTGCCTGCACAGCTAGTGTTGATGG 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 CTTGTTTGTTGTTTTCACCAGAGTGAGCTCCTTCTGGACATACTGCCTGGCAGCCTGCCTTCCTAGGGAGCTGG 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 CGCCAAGGCCTCTCCCTGATGGCACACAAGGAGCCTCCTTCCTGTAGCAGCGCCCAGTTTTCATGTGGATGGAT 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 TGTAGTTCATTTGACCCTCCCCATCCGCGGGCCATCCGGCTTGTGTCCAGCTTTTAGCTCTTGCCAATGGTGCT 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 GCAGTGGCCATTCTTGTAGTTATAGCTTTGCGTACTCAGGAAGGCCCTTCTCCCGACTGCGGCCCCCAGCCTGG 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 TCCACTAAATGCAGCCTGTGGTCGGGCAGACAGCATTGGGGTCCATTAGGAAGACCAGGTTTGCTGGGCATAAG 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 CTTCACAGGACGGGAGAACCTGCCCATGGTGGACTGTCGTTCTCCACAGCTCCCTTCCCTTGCCCCTTCGGGCC 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 TCCAGGATATGTTTGCGGGGGTGGGTGTGGTGTCCAGCTGTTACCAGCTTCTGAGCTAGAGCTGTACTGCCTCA 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 CGTACACCCCCACCTCTGTAAATGGTCCTTGATTAAATCGTCCTCATATTACCTCCTGCAATGTGCCAGCTGAT 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 TCCCACACACCCTGACTGACATAGTTGTGGCCTCTCGAACTTTGATATTTGGCCTGGGAGGACAGAAGAGTAAG 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 GTCGCCACGGAAACGCAAGGGGCTCAGTTGTCCCCCCACCCCAAGTTGATGCAGCATCTTCTCGGTCAGAATTG 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 CTTCAGGGTGGTTTGCGCACCCTCACTTTGATGATTTAATGAAGACATTTCCTTCTTTCCCAGCATCGGGCAGT 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 AAGTTTCCTGGGCAGAGGCACTTTCTGTTGGTCTGGTCTTGTGGGCCCAGGCAAGCAGCCCCCTGCAGCCAAGG 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 TGCGGCAATGACCACAGTGACCGCGTCCAAGTGCTGCCGAAACGCCTTTTTCCTCTTCCCTGTTTCCCTGGACC 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 CTTTCCTGCTCTCTGTCCATCTGTGTGTCCTTCCGTTCACCTGTCTCTTCTGCTGGAGACACGTACCTGAAGCA 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 GGTCCTCTCCTGTCACTTCCTGGCTCCCCAGGGCTAGGTCCCAGGGTGCTCTCGCTCTGGCTTTCGAGGCTCCT 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 CACCACCCAGCCCACCCCACCCCCACAGGCCCCTGTGCTCCAGTTTCATCCCTGGTCACAATGCAGTCTGCAGA 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 TGCCAGACCCCTCTTCTGTGCCCAACGGCTGGGACACCCCTACTCCCAGAGAGGCCTCTGTGGACACCCCCACA 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 GCTCTCGCAGCACTTGATACCTTGAGTGTGATTGGTCACATCTGGGCTTTCTCCCCCACCCATCTGTGGAACCC 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 CAAGAGCCAGGACAGTGACCTCATCACCTCTACTGTCTCCCCTAGCACCTCTGGGAGGAAGGGCCCACAGTAGG 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 TGCTCAATAGATGTGTAAAGAAGGCAGGGAAGCAAGAAGGTTGCTCAAACAAGACCATGTTCCCAGCAGACAGA 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 TTGCACTCTGACCCAGATGCCACCACACGAAACTTACACCTGCCTGGGGAACAATCCTGTGCTTGGCTCTCCTT 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 GGTGGCCAGGGACAGTTGTGCCTCATCCCTCACTTGCAAACCCCAGTCCTGTCTGACCCAGAGACCCTCACAGG 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 GCATCAGCCAGTGAAGGCGGTTTGGGGCTGGAGGATATGTTCTGATCTTGGGAAGAGCTTGGTAGGAGCCAGCC 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 ACAGAAAGTTTCAGGGCAGAACTGAACAGGTCTCGGGAAGGACACTTCATGCCAGCTAGAGAGGCTCTGGGCAC 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 AGGAAAGAATTGGACTTCGGGCAGAAAAATGTTTGTGCTATTTAGTACTATGTAACAAATCACTCCAAAACTTC 5106
Query 73 ------------------------ 72
Sbjct 5107 ATTGCTTAAAGCAACAAGCATGTA 5130
