Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- XR_001755383.1
- Aligned Length:
- 5052
- Identities:
- 64
- Gaps:
- 4980
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCAGGAGTCTCTCTGCTGCCAGCCCCGCCCAGACTCCAGGCAGGTTCTCGTTGCTATGGTGATCGCCGGTGCAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTGGATGCTTGGACGCGCCGCTGCCAGTCCAACGCAGACCCCGCCCACGACGTCGACGATTCGTGTAGCCCGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGTCCCGCGTGGCTCTCGTTGCCATGGTGATCGCCGCCGCTGGCTCAGGCGGACCAGGCCGCGCGGAGCCCCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTTTCACAGCCATCGCTGGACTGTGGAAGAATGAGGTCCTCCCTGACACCTTTGGGGCCCCCTGTGAGCCGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACCGTGTCATCGCCAGCTTCCCTAAGTGGTACACGCCGGAAGCCTGTTTGCAGCTCAGGGAGCACTTCCACGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGGTCAGCGCTGCCTGCCAACGCAGGAACACGGGGACTGTCGGGCTCAAACTCTCCAAGGTGGTGGTGGTTGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGATCTCTACGTGGGGAAGACCAGCCTCATCCACAGGTTTTGCAAGAATGTTTTTGATCGAGACTACAAGGCCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCATTGGGGTGGACTTTGAAATTGAGCGCTTTGAGATTGCTGGGATTCCCTATAGCCTCCAGATCTGGGACACA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCTGGGCAGGAGAAGTTCAAGTGCATCGCATCTGCCTACTACCGGGGTGCCCAGGTGATCATCACGGCCTTTGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTCACTGACGTGCAGACCCTGGAGCATACCAGGCAGTGGTTGGAGGATGCTCTGAGGGAGAACGAGGCAGGCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCTGCTTCATCTTCCTCGTGGGAACCAAGAAGGACCTTCTGGCGAGAACGTGAAGGCATTCTTCAGCCGCGTAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCGCCCTGGCATTCGAGCAGTCGGTGCTGCAGGACCTGGAGAGGCAGAGCAGTGCCCGGCTCCAGGTCGGCAAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGAGACCTAATCCAAATGGAAGGGAGTCCGCCCGAGACCCAGGAGAGCAAGAGGCCCTCCAGCCTGGGCTGCTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTAACTGGGGCCTGCGTGGAAGGCCTCCGCTCCCTGCACACACACGGACAGGAATTTCCGTGACTGTGGTGTGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGACTGGAGCCCAAGCTCTGCAGCGTGTCGCCCTCAAGCTGTAGGCCCATGTTCCAGTCCCTCCACCCACCCAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CGGGCTCAGCTCCAGGGCACAGTCACTTGTCCGTTGCAGGTTGGGCACTAGAAAAGGCCCCCACTGGCTGCCTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGAGCCCCACACCACCGGGCCAGTGCAGGCACTGTGGTGATCCCATAAAAGGCCAGTCCATTTGCAGGGTCATC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGACAGTCACCTTTGGCCTCAAGAGGCCTCAGAACTGCAAACTCCTGCGTCGGTCTATACTACTCGGCCATGGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCACATCAGCAGTCAACCCTGCACTCTTTCCCAGCGATCTTGGATGTGTCCCCAGGATCCGTCACAGTGTTCCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGCAACCTGGACTTGTCAAAGTCAGCACCTGAAGGAGAGGCCACCTGCCATTCCCCCTGGGAGTTTTCTGTTGT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGCAGGACTTATGGTTCTGGGTCTCAGAGCTTCAGGCCTCACTGTCCTTCTGCCACGGATGCTCAAGGTTCCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGGCAGACCAGCACCTCTGGAGGACAATGGACAAAATGTCTCTTAGACCTGTTCTGGCTGAAGGGCTATCTCTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCACCTCTGAGATCCCTAGGTCCTGCCCTCCTGGTCCGTGGGCCAGGATGTGCAGAACAACCACTCAGGCCTTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTGGCCCACCTGGACAGTGCATTTACCTGTGTGCTGCGGGAGGCAGACTGCACAGCTGTCCTAGGGTAACTCAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCTGCAGCCCTTGAACATGGCACTGCCCTCCTCTGGCACTCATGCTGGGCCTGTGCCCACTGCTGCCTCTCCAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCCTCTCTCATTGGCCTATACATCTCTTAGGACCTTTGTAATGGTGTCCATGCACCTTTAGAGGACTTCAGAGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCCTGCCAAGTCTAGCATGTTCCTGTCTCCAACACCGCCTCCTGCACATGCAGAGCAGACAGAAATACCCCACA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CATTCCCCAGCCTCTCTGCCCAGTATGCTCATCCACAGGGTTTTCTCACTGCTATGAACCAGCCCCACAGCCCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGGCCCCTGTCACCTGGCTATGCCCACTCATCCCACCCGTCTCGTGCTGTTGCTTCCCGTAGATGGCGAGCACC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTGCAGGCAGCCTTCTGATCAGTACTGCTCTCCTAGGGCCTGGCACACTGCAGCTGCCCTGTAAATGTTCAGCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CAGCGATTGCCAAATACCAGTTAGGGAAGAACACTGGCATCTTTTTCTATTCATTCCCCCTTCAACATATTTTT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGTAGTTTTTTATATAAATGACTTTTTTTTTTTTTTGAGATGGAGTTTCACCCTTGTTGCCCAGGCTGGAGTGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AATGGCGTAATCTCGGCTCAGTGCAACCTCTGCCTCCCAGGTTGAAGCGATTCTCCTGCCTCAGCCTCCCAAGT 2442
Query 1 ---------------------------------------------------------ATGGGGTTTCTCCATGT 17
|||||||||||||||||
Sbjct 2443 AGCTGGGATTACAGGCATGCACCACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGT 2516
Query 18 CGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------- 72
.||||||||||.|||.|.||||||||.|||||||||.|.|||||||||.||||||
Sbjct 2517 TGGTCAGGCTGCTCTCGGACTCCTGATCTCAGGTGACCTGCCCACCTCGGCCTCCCGAAGTGCTGGGATTACAA 2590
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2591 GGGTGAGCCACCATGCCCGGCCATAAATGATTTTATTCATTTTTATGTTTTCTTTTGGGCGGCGGGATGGAGTC 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 TCTGTCACCCAGGCTGGCGTGCAATGGCACGATCTTGGCTCACTGCAAGCTTCCCCTTCCGGGTTCATGCCATT 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 CTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACGTGTGACCATGCCGGGCTAATTTTTTATATTTTT 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 AGTAGAGAGAGGTTTCACCGTGTTAGCCAGGATGGTCTCGATGATCTGACCTCGTGATCTGCCCGCCTCGGCCT 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 CCCAAAGTGCTGGGATTACAGGCCTGAGCCACCGCGTCCGGCCTCCATAAATGACTTTTAAAGGGGTTGTATGT 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 TTAGTGTGAACAAAGACAGTACAAAGCATATAAAATACAAGGTGAAAGCCCCCCCCCCGCCACATTAGCTGCGC 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 CCCTGAAGTGTCTCCAGCAGAAGAGATGGATGAATGGAAGGACACACAGATGGACAGAGAGCAGGAAAGACTGT 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 TAGCTCTGCTAACAGTCAGGACTATTCCTTCTGGACTCTGTGCCTTTGCCTGCACAGCTAGTGTTGATGGCTTG 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 TTTGTTGTTTTCACCAGAGTGAGCTCCTTCTGGACATACTGCCTGGCAGCCTGCCTTCCTAGGGAGCTGGCGCC 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 AAGGCCTCTCCCTGATGGCACACAAGGAGCCTCCTTCCTGTAGCAGCGCCCAGTTTTCATGTGGATGGATTGTA 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 GTTCATTTGACCCTCCCCATCCGCGGGCCATCCGGCTTGTGTCCAGCTTTTAGCTCTTGCCAATGGTGCTGCAG 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 TGGCCATTCTTGTAGTTATAGCTTTGCGTACTCAGGAAGGCCCTTCTCCCGACTGCGGCCCCCAGCCTGGTCCA 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 CTAAATGCAGCCTGTGGTCGGGCAGACAGCATTGGGGTCCATTAGGAAGACCAGGTTTGCTGGGCATAAGCTTC 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 ACAGGACGGGAGAACCTGCCCATGGTGGACTGTCGTTCTCCACAGCTCCCTTCCCTTGCCCCTTCGGGCCTCCA 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 GGATATGTTTGCGGGGGTGGGTGTGGTGTCCAGCTGTTACCAGCTTCTGAGCTAGAGCTGTACTGCCTCACGTA 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 CACCCCCACCTCTGTAAATGGTCCTTGATTAAATCGTCCTCATATTACCTCCTGCAATGTGCCAGCTGATTCCC 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 ACACACCCTGACTGACATAGTTGTGGCCTCTCGAACTTTGATATTTGGCCTGGGAGGACAGAAGAGTAAGGTCG 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 CCACGGAAACGCAAGGGGCTCAGTTGTCCCCCCACCCCAAGTTGATGCAGCATCTTCTCGGTCAGAATTGCTTC 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 AGGGTGGTTTGCGCACCCTCACTTTGATGATTTAATGAAGACATTTCCTTCTTTCCCAGCATCGGGCAGTAAGT 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 TTCCTGGGCAGAGGCACTTTCTGTTGGTCTGGTCTTGTGGGCCCAGGCAAGCAGCCCCCTGCAGCCAAGGTGCG 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 GCAATGACCACAGTGACCGCGTCCAAGTGCTGCCGAAACGCCTTTTTCCTCTTCCCTGTTTCCCTGGACCCTTT 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 CCTGCTCTCTGTCCATCTGTGTGTCCTTCCGTTCACCTGTCTCTTCTGCTGGAGACACGTACCTGAAGCAGGTC 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 CTCTCCTGTCACTTCCTGGCTCCCCAGGGCTAGGTCCCAGGGTGCTCTCGCTCTGGCTTTCGAGGCTCCTCACC 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 ACCCAGCCCACCCCACCCCCACAGGCCCCTGTGCTCCAGTTTCATCCCTGGTCACAATGCAGTCTGCAGATGCC 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 AGACCCCTCTTCTGTGCCCAACGGCTGGGACACCCCTACTCCCAGAGAGGCCTCTGTGGACACCCCCACAGCTC 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 TCGCAGCACTTGATACCTTGAGTGTGATTGGTCACATCTGGGCTTTCTCCCCCACCCATCTGTGGAACCCCAAG 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 AGCCAGGACAGTGACCTCATCACCTCTACTGTCTCCCCTAGCACCTCTGGGAGGAAGGGCCCACAGTAGGTGCT 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 CAATAGATGTGTAAAGAAGGCAGGGAAGCAAGAAGGTTGCTCAAACAAGACCATGTTCCCAGCAGACAGATTGC 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 ACTCTGACCCAGATGCCACCACACGAAACTTACACCTGCCTGGGGAACAATCCTGTGCTTGGCTCTCCTTGGTG 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 GCCAGGGACAGTTGTGCCTCATCCCTCACTTGCAAACCCCAGTCCTGTCTGACCCAGAGACCCTCACAGGGCAT 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 CAGCCAGTGAAGGCGGTTTGGGGCTGGAGGATATGTTCTGATCTTGGGAAGAGCTTGGTAGGAGCCAGCCACAG 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 AAAGTTTCAGGGCAGAACTGAACAGGTCTCGGGAAGGACACTTCATGCCAGCTAGAGAGGCTCTGGGCACAGGA 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 AAGAATTGGACTTCGGGCAGAAAAATGTTTGTGCTATTTAGTACTATGTAACAAATCACTCCAAAACTTCATTG 5032
Query 73 -------------------- 72
Sbjct 5033 CTTAAAGCAACAAGCATGTA 5052
