Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10261
Subject:
XR_002956216.1
Aligned Length:
3612
Identities:
65
Gaps:
3540

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTCATGTCCCAGCCTCCTGAGTAGCTGGGATTACAGGCGCACGCCACCACACCTGGCTAATTTTTGCATTTTTA  74

Query    1  ------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGC  68
                  ||||||||||.||||||..|.|||||||||||.||||||.||||||||||||||||.|||||||||||
Sbjct   75  GTAGAGATGGGGTTTCACCATGTTAGCCAGGCTGGTCTTGAACTCTTGACCTCAGGTGATCCACCCACCTCAGC  148

Query   69  CTCC----------------------------------------------------------------------  72
            ||||                                                                      
Sbjct  149  CTCCCAAAGTACTGGGATTACAGGGGTGAGCCACTGTGCCCAGCCTCAAGTGTTGAGTTGTTAACCTTTCTTAT  222

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  223  TGTAATAAAATGTACATAACAAAATTTGCCGTTTTCACAGTTTTTTAAGTGTATGATTCAGCAACATTAAGCAC  296

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  297  ATTCACAACGTTGTGTAACCATCACCACGTATCCCTTTCCAGAACTTTTCATCATCCCAAATAGAAACTCTGTA  370

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  371  CCCATTTAATAATAGCTCCCTATTCCTTCTACCCTCTCCACCCTCCCCACCTGCCCCTGCAGCCTGTGGCAACC  444

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  445  TCTGTTCTACTTTATCCCTTTATAAATTGGCCTATTCAAGGTACCTCATATAAGTGGAATCATATAATATTTGT  518

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  519  TTTGTTTGTGTCTGGCTTGTTTCACTTAGCATAATACTTTCAAGATCCATGTTGTGGCATATATCAGAATTTCA  592

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  593  TTACTTTTCAAGGCTGAATAATTTTCCATTGTGTGGATATATGATACTTTATTAATTCATCTGTTGATGGATAC  666

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  667  TTGGGTCGATTCCCCTGTTTGGTTCTTGTGACTGTTGCTGTTATGAACATTTGTGTACAATTTATCTGAGTTCT  740

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  741  TGCTTTCTAGCATTTTTGTGGATATTTACCTAGGAGTAGAATTGCTGGATTTTATGAGAATTCTATGTTTAACT  814

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  815  TTTTGAGGAACTGCAAAAGGATTGGGTTTGAATTAGGTAAACCTAAAAGAGTTGTAGAACAATGTGGTAGCTCA  888

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  889  CTAGGAAATCAGTCTTGGGGTTAGTGTCTGGTTAATACACCTGTATGTAATTAATTGGCCTCTGAGTCATGCCT  962

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  963  TTTATCACTTCTTTTCTAAAACATTTATTAAGCACGTACTTTGTCGCAGGCCCCATTTTGGAATACAAACTATA  1036

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1037  GAGAGAAGCTCGCAGTTCATTGCAGAACACAGTTACTTTGCAGTGCACAAGTTATATGACAAAGGAGAACACTA  1110

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1111  GCACAGGGCAGTCCAGAGGGAAGAGAGCTTGGCTCTTTCCCAGAGGAGGTGACATCTGCCTGAGGCTTGGTGGA  1184

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1185  GGAGCAGGAGCTGGCTAGTTGAAGAAGAGGTAAAAGACAGTTGCAGAGAGTGTGCTGTGCAAAGGCTCAGAAGA  1258

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1259  GTGAAGAAAATATTGGGACATACAGAAAGTTAGAATGGATCGATACAGCCCGAAGCATAGGATGTTAGGGAAGG  1332

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1333  ACGTGGCAAATGATGGGGATGGAGAAGTAGCCAAAGGCCAGAGCAGGAAGGACTTTGTAAGTCATTTTAAAAGA  1406

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1407  TTTCCATTTCACACTGAACGTAACGGAGAAATATTGAGGATTTTTTTTTTTTTGCAAAGAAATGATGTAATCAG  1480

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1481  AAATATATTTTATATAGCTATTATGTACCTACAAAAATTAAAAATTATAACAAATAGGCCGGGCACAGTGGCTC  1554

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1555  ACGCCTGTAATTGCAGCACTTTGGGAGGCCGAGGTGGGCAGATCACTTGAGGTCAGGAGTTGAGGCCAGCCTGG  1628

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1629  CCAACATGGTGAAACCCTGCCTCTACTGAAAAATACAAAAATTAGCTGGGCATGGTAGTGGGCCCCTGTAATCC  1702

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1703  CAGCTACTCGGGAGGTCGAAGCAGGAGGATCGCTTGAGCCCGGGAGGCAGAGGTTGCAGTGAGCCAAGATCATG  1776

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1777  CCACCGCACTCCAGCCTGGGCGGCACAGTGAGACTTCATCTCAAAAGAAAAAAAAATTATAAAAAATAATATGG  1850

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1851  TTTATAAATCAGGCAGCTATGTAAATCACAATCCCTGTTGAGAGGCTGCATTATGGCAGTAGCGGTGGGAATGG  1924

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1925  ATTCAGAGTCTATAGGTGGTAGAACCGGTAGGACTTCTTGACTAATTTAGATGGCAAGGAAAAGAGGAATGCAG  1998

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1999  GATGCTTCTAGATCTCGTGGACAACCAGATGAATAATCTCATTTCCCCAGAGAGTGAATTCAGAAGGGCAGAAA  2072

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2073  CTCAGTTTTGTGAGTTCTGTTTTGCATTTTACATGCCTATCGAATATCCAAGTGGAACTGTGGGTCTAGATGGA  2146

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2147  GCTCGAGAGATAACTATGAGCTGGAGATAAATATTTGGGAGTTGCCACTTTATGTAGTGGTAATTGAGAGCATA  2220

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2221  AGAAATGGAGAGAATGCAGGGTGAAAATGTCATCTTGGGGCAGATGCAGGACAAGAGCTTGTGAAAGGAATGGC  2294

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2295  CAAGAGGAATAGGTGGACAACCAGAGGAGTGGGAGCTCACAGGAGCCTTGAGTGGAGTTTCAGAAACCCAGATT  2368

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2369  TCACACAGAAACATCAACAAATCAACTTCGCGTCTCGAGGTGATGGTATTTAAACTGTGTTCTATTGAGACCCT  2442

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2443  TCATTAATATTTGGTTTTGAAATATATTTTAACATAAGTTAAAAATAGCAAACTCAAATATGGTGTTTCTAACA  2516

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2517  TTTTAAAACTGAAATCCAGCAAACATCAGTGCCACGTTAACTGTTTTTTTGTGCAGGTGCCAGAATAAGGCCAT  2590

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2591  TTCTGGTAAATTGAAGAGCTTCCTGGTATTTCAAGCAATCCAGGTAAGAGACACAGAAAACTGTAAATGATGCA  2664

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2665  AAAACAGCTGAACTGAATATGAGAGATGTTCAAGAGTTATGACCTGAGAAGATGTCCCCGCCATCAATAGACAT  2738

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2739  TGCAGGATGTGATACCACTCTGGAGGACTTTGAAGTTTCTGGATTTGGTTGAAGAAAGATGCTTTGGACATTTT  2812

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2813  GAATTTGAGATGCTTCTCCAGAAGTCTTATGGATCTGAAGCATGGGAGAGGAGTATAAGCTGGGGAAATAAGTT  2886

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2887  TGGGGGTTACCAGAAAACTAGCAGTGGGTAAGGCCATGAGCAAATGAAATCAAATAGAGGATGAAGAGAACAGG  2960

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2961  AGCCCTAGCAAACCTTGACAGTTAAAGAGTATGCAGGGAAAAGGACTTAGAAAGGACCCTGTAAAGAAAGATCC  3034

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3035  AAGATGACCTGAAGAACTGAGAGAGCCTCTCTGTTATTTAGGGTGACATAAATAGCGTCTGGAAGCAGGACCTG  3108

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3109  AAGTAGGATCAGTTTTGGACAGAGCTGGCAATTCTTGGTACCAGTATGCAGCACTTACAGGAGCCCTTTGAGCT  3182

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3183  CTCCACTTTCACGGCTCGCCTCTTCTGCCCTGGTGCCAGGATCTATTTTTGTCATCACCAGCCAGGAAGGATAC  3256

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3257  AAGGCCTCTTCCAAGATGAAGACGAAACTATTGACAGATATTTTGTCAAGACCAAATTTTCCCTAAGGGCCCTG  3330

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3331  TCATAGATTGTTCCCTGGGCAGGATGCAGCCTCCTTCAGAGAGTGAAGAACACACCAAAAGATCCTCTACTAAA  3404

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3405  TTAATCATAAGCCACATGAGGCAGGCTGGAATACAGTTACCAATCTGCTTTAATTCTCCCACTTAGATGGCCTG  3478

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3479  AAGCCGCCTGAACTGAAAGTTGGATGAAGCTCGGCTTTGAGTTTCATCGCGGGGCATCGTGTGGCCTAAGTCCT  3552

Query   73  ------------------------------------------------------------  72
                                                                        
Sbjct 3553  TAGCCAATGCCTGCCAAATATTAGCTTGAGTCGCAATAAAGAGAAAAGGTCCAAATTCTC  3612

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