Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10261
Subject:
XR_427107.3
Aligned Length:
4527
Identities:
63
Gaps:
4455

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GATGTAAGAGGCAGGGCACTCGGCTGCGGATGGGTAACAGGGCGTGGGCTGGCACACTTACTTGCACCAGTGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAGAGAGGGGGTGCAGGCTGAGGAGCTGCCCAGAGCACCGCTCACACTCCCAGAGTACCTGAAGTCGGCATTTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AATGACAGGTGACAAGGGTCCCCAAAGGCTAAGCGGGTCCAGCTATGGTTCCATCTCCAGCCCGACCAGCCCGA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCAGCCCAGGGCCACAGCAAGCACCTCCCAGAGAGACCTACCTGAGTGAGAAGATCCCCATCCCAGACACAAAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCGGGCACCTTCAGCCTGCGGAAGCTATGGGCCTTCACGGGGCCTGGCTTCCTCATGAGCATTGCTTTCCTGGA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CCCAGGAAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGCGGGATTCAAACTTCTCTGGGTGCTGCTCTGGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCACCGTGTTGGGCTTGCTCTGCCAGCGACTGGCTGCACGTCTGGGCGTGGTGACAGGCAAGGACTTGGGCGAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GTCTGCCATCTCTACTACCCTAAGGTGCCCCGCACCGTCCTCTGGCTGACCATCGAGCTAGCCATTGTGGGCTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAATCCCACTCTGGGGTG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCGTCCTCATCACCATCGTGGACACCTTCTTCTTCCTCTTCCTCGATAACTACGGGCTGCGGAAGCTGGAAGCT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TTTTTTGGACTCCTTATAACCATTATGGCCTTGACCTTTGGCTATGAGTATGTGGTGGCGCGTCCTGAGCAGGG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGCGCTTCTTCGGGGCCTGTTCCTGCCCTCGTGCCCGGGCTGCGGCCACCCCGAGCTGCTGCAGGCGGTGGGCA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTGTTGGCGCCATCATCATGCCCCACAACATCTACCTGCACTCGGCCCTGGTCAAGTCTCGAGAGATAGACCGG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GCCCGCCGAGCAGACATCAGAGAAGCCAACATGTACTTCCTGATTGAGGCCACCATCGCCCTGTCCGTCTCCTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TATCATCAACCTCTTTGTCATGGCTGTCTTTGGGCAGGCCTTCTACCAGAAAACCAACCAGGCTGCGTTCAACA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TCTGTGCCAACAGCAGCCTCCACGACTACGCCAAGATCTTCCCCATGAACAACGCCACCGTGGCCGTGGACATT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TACCAGGGGGGCGTGATCCTGGGCTGCCTGTTCGGCCCCGCGGCCCTCTACATCTGGGCCATAGGTCTCCTGGC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GGCTGGGCAGAGCTCCACCATGACGGGCACCTACGCGGGACAGTTCGTGATGGAGGCTGGAGTGCAATGGCGCG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ATCTCCGGCTCACCGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGACCAGCTGGGA  1406

Query    1  -------------------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTC  31
                                                       |.|||||||||||||||.|||||||.|||||
Sbjct 1407  TTACAGGCCACCACACCCAGCTAATTTTGTATTTTCAGTAAAGACGGGGTTTCTCCATGTTGGTCAGGGTGGTC  1480

Query   32  TGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC---------------------------------  72
            |.|||||||...||||||||||||.||||.|||||||||||                                 
Sbjct 1481  TCGAACTCCCAGCCTCAGGTGATCTGCCCTCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGC  1554

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1555  GCCCGGCTCTTTCTTTCTTTTTTGAGACAGGATTTCACTCTGTTGCTCAGGCTGGAGTGCAATGGCGCCATCAC  1628

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1629  AGCTCGCTGCAGCCTCAACTTCAGCCTCCCGAGTCATTGGGACTACAGGCTCATGCCACCACACCAGGCTAATT  1702

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1703  TTTAAAATTATTTGTAGAGATGTGGTCTTCCTATGTTTCCCAGGCTGGTCTCGAACTCCTGGGCTCAAGTGATC  1776

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1777  TTCCCGCCTTGGCTTCCCAAAGTGCTGGGATTACAGACGTGAGCCACCCCACTCAGCTTTGTTTCCTTCATGTA  1850

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1851  GCCCAGAGGGCGACACTATAAGCCCCATTTTACAGATGAGAAAACAGATCCTGACAGATGAGGTGACTTGCTGG  1924

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1925  AAGCTGCAGACCCAGGACTAACAGAAGCCTTTTCCCCAAAACTGTTTAGTCTTCAGCAACCAGCTATGGGATGG  1998

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1999  GAGCTCCCCATTTCTCCCCACCCATCCCCTCTTGCCACCTAGGGACAGAGCTGTCCCAGTTCAACAGTGGAAAA  2072

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2073  ACAGAGCATGCCCCCAGGGATAAATCGGTTGAGGGACTACAGAGGATCTCTCCTCTGGAATCCCCAGTCCTGTC  2146

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2147  TACTCCTCACCAAGGAGTTCACCCCCACCCCAGGGCTTCCTGAGGCTGCGGTGGTCACGCTTCGCCCGTGTCCT  2220

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2221  CCTCACCCGCTCCTGCGCCATCCTGCCCACCGTGCTCGTGGCTGTCTTCCGGGACCTGAGGGACTTGTCGGGCC  2294

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2295  TCAATGATCTGCTCAACGTGCTGCAGAGCCTGCTGCTCCCGTTCGCCGTGCTGCCCATCCTCACGTTCACCAGC  2368

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2369  ATGCCCACCCTCATGCAGGAGTTTGCCAATGGCCTGCTGAACAAGGTCGTCACCTCTTCCATCATGGTGCTAGT  2442

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2443  CTGCGCCATCAACCTCTACTTCGTGGTCAGCTATCTGCCCAGCCTGCCCCACCCTGCCTACTTCGGCCTTGCAG  2516

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2517  CCTTGCTGGCCGCAGCCTACCTGGGCCTCAGCACCTACCTGGTCTGGACCTGTTGCCTTGCCCACGGAGCCACC  2590

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2591  TTTCTGGCCCACAGCTCCCACCACCACTTCCTGTATGGGCTCCTTGAAGAGGACCAGAAAGGGGAGACCTCTGG  2664

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2665  CTAGGCCCACACCAGGGCCTGGCTGGGAGTGGCATGTATGACGTGACTGGCCTGCTGGATGTGGAGGGGGCGCG  2738

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2739  TGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCAACCTGGGGGCTTTAGGGACCTGCTGTTTCCT  2812

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2813  AGCGCAGCCATGTGATTACCCTCTGGGTCTCAGTGTCCTCATCTGTAAAATGGAGACACCACCACCCTTGCCAT  2886

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2887  GGAGGTTAAGCACTTTAACACAGTGTCTGGCACTTGGGACAAAAACAAACAAACGAAAAACATTTCAAAAGGTA  2960

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2961  TTTATTGAGCACCTGCAGGCGTGACCTGACAGCCCAAGGGTGGGTGGGGTGAGGGCTTGAGGACTTGGGCGGGA  3034

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3035  CACAGGCTCCAAACTGGAGCTTGAAATAGTGTCTGATGAATGTTAAATTATCTATCTATCTATTTATTTATTTA  3108

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3109  TTTGAGACAGGGAAAGGGTCTCCCTCTGTTGCCAAGGCTGGAGTGCAGTGGCGCAATCTTAACTCATTGCAACC  3182

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3183  TCCACCTTCTGGGTTCAAGCGATTCTCTTTATTCAGCCCCGGGAGTGGCGCGCGCCACCACGCCCAGCTAATTT  3256

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3257  GTGTATTTTCAGCAGAGACGGGGTTTGCCATGCTGGCCAGGCTGGTCTCGAACTGCTGGATTCAAGTGATCCGC  3330

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3331  CCATCTCCGTCTCCCAAAGTGCTGGGAATTACAGGCGTGAGCCACCAAACCCGGCCTGATTAAAGTTAAATAAA  3404

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3405  TACTAGTTCCCTTCTCGTCCAAAGGAGCAGGGAATGGGAACCGGGAAGGCACGAAGTCTCTAAAGCATCCAGAA  3478

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3479  GACCCCTACACCAGGGTCTGGTCCGCTCCTATTCGCCGCAGCCTTTCTGTTCCGCCTGCAACCCATTTTCCAGA  3552

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3553  CAGTAAAACGGCGGCGCACTTCTTTCTCCGTCAGGCACCAGGTCATAAGGAACCCAAGAGTCTGTGCCTCTGAG  3626

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3627  GCCCAAATTATTTGCTGTTTCCTCAGGGGAGCCGGCGGCCGCGACTCCCACGCCGCGCCGTTACCGCTCCCTCT  3700

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3701  CTGCTGACTGCTCCCCCTAGGGGCAGAGACGGTCCCGACGCCCGCCATCCCGCCCCGGCCTCACCCCTCCCCGC  3774

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3775  CAGGCGGAACGACGCGGGGAGGCGGGCGCTCGGGGCTCGCGCCAGGGGCCCCAGAATCCTTCGGGGAGAGTGGG  3848

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3849  TGGGAGGAAGCTGTGTGGGCGGGGAGCCCCCTCTGCCTTAGGGAGCGGCTGGGCACCCATTCGCCCCATTCAGG  3922

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3923  GGCTGCACTTTATAGACGTTCCCTAGGCTGTTTCTAGGCTCCCCCAAGTCCCTCCTCCAGCCTCGTCGGGTCCC  3996

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3997  TCAGACCCCAGCCCAGGACCTGCGGAGGGCCGCAGCGAGGAGAGGCCAACAGGCCTTTCCCTAGAGTTGAACCT  4070

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4071  GGGCCGGGTGTTGCACCTGGAAGAACCCCCGATTTCCTGGGGACCCAGCAGGGCAGGCGGCCTGGCTCCGCGCT  4144

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4145  CAGGTCCGGACGCTTGTTTATGAGAAGAATTTCCTCTTTCTTAAAAGGGCAACGATGCGAGTGGGTCCCTCAAG  4218

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4219  GAGAGAAGAGATGGGACCGGTCTGGTGCGACCTGGGCAAGCGCTGCAGAGGGTACCTGGGCAAGAGGGCCGCCC  4292

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4293  GCCTCCTCTGGGTTTGGCACTGGAGAAGATGGGTCCATGCCAGCTGAAGGAGGAGATGGATGGGGGACGTTTAG  4366

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4367  CGAAGAAAGGCATCTCCCAGATCCTTTAGCCTCCTGGAAGTGCCCCCGTTGTACCCCCTACACACCCCTCTTGG  4440

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4441  CATTGAGTGCCAGTCCTCTGCCAGGCTCTGTGTTACAAGTTGGGGAGGGCGGCAAAGTCCCGAATTAAAGATGT  4514

Query   73  -------------  72
                         
Sbjct 4515  CAGTTCTCAAGGA  4527

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