Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- XR_946651.3
- Aligned Length:
- 4140
- Identities:
- 65
- Gaps:
- 4068
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAGCCACCCTGGGGAAGGTGGATGCCGGAAGAGGCGTCGCCTGCGGGTCACCCAGAGGACACCCGGCGGGGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCCGAGGGTGGGAGTGAGGAGAGGTAGGAGAGGCCACGGCAGAGGGAGGCCCCGCGCAGAGTGGGAACCATCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCGGTGCGGGCCTGAACTTCCAGGGCCGGCTACTCCTCGGCAGAGCGACCGCGCGGTGTCTCAGAGCGCGGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGAGCCGCACTAAGAGCGCTGGACGGCGGGAGAGAGGCTCGGAGGACCGGTAGCTCCCAGCAAAGCGGCCCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGATGTCGGGAGCTATCTTCGGGCCCCTGGAGGGCCCGAGCTCCCTGGATGCCCCGAGCATCCACCCGCTGGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGCCCGCTGTGCCACGTGCAGTACGAGCGCCCGTGTCTTCTGGACTGTTTCCACGACTTCTGTGCCGGCTGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGCGTGGCCGCGCGACCGACGGCCGCCTCACCTGCCCGCTGTGCCAGACGTGGAGACCACGTACTTCTGCAACA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGTGCGGACAGCCCCTATGCGCGCGCTGCCGCGACGAGACGCACCGAGCACGCATGTTCGCGCGCCACGACATC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGGCCCTGGGTCAGCGAAGCCGCGACGTGCCCCAGAAGTGCACGCTGCACGCAGAGCCCTACCTCTTGTTCTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACCGACAAGAAGTTGCTGTTGTGCATCCGCTGCTTCCGCGACATGCAGAAGGAGAGCCGGGCACACTGCGTGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCTGGAATCGGCTTACGTGCAGGGCTGCGAGCGGCTGGAGCAGGCGGTGCTGGCCGTGAAGGCCCTGCAGACG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCCACGCGGGAGGCCATCGCGCTGCTGCAGGCCATGGTGGAGGAGGTGCGGCACAGCGCCGCCGAGGAGGAGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGCTATCCACGCCCTCTTCGGCAGCATGCAGGACAGGCTGGCAGAGAGGAAAGCGCTGCTGCTGCAGGCTGTGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGAGCCAATACGAAGAGAAGGACAAGGCCTTCAAGGAGCAGCTCTCTCACTTGGCCACCTTGCTGCCCACCCTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGGTCCACCTGGTCATCTGCTCCTCCTTCCTCAGCTTGGCCAACAAGGCTGAGTTCCTGGACCTGGGCTATGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTGATGGAGAGGCTGCAGGGCATCGTCACGCGGCCGCACCACCTAAGGCCTATTCAGAGCAGCAAGATTGCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTGACCACCGAGCTGAATTCGCGCGCTGTCTGGAGCCACTGCTGCTGCTGGGGCCACGTCGGGTGGCAGCTGCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCAAGTGGTGCTAACACGCTGGCAGGGGGCTTAGGCCCCAAGGCGCTGACGGGGCCCCACTGCCCCTCCCCAGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGGAAAGATGTCGGGGTCACCCGTCCAAAAGCCCACGCTGCACCGGTCCATCAGCACCAAGGTGCTGCTGGCGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGGCGAGAACACGCCCTTCGCAGAGCACTGCCGCCACTATGAGGACTCCTACCGGCACCTGCAGGCAGAGATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGAGCCTAAAGGACCAGGTACAGGAGCTGCACCGAGACCTCACCAAGCACCACTCGCTCATCAAGGCGGAGAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CATGGGAGACGTCCTGCACAAGTCCCTGCAACTGGACGTGCAGATCGCCTCGGAGCACGCCTCCTTAGAGGGCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGAGGGTCGTCTTCCAGGAGCTTTTCTCTTTCAGATTTGGGAGGAAGCCTATCAGCGAGTGGCTAATGAGCAGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGATTTATGAAGGTTCCAGACAGTTGGCTGCCGAGTGAACCCTCTGTCCCTGAGCTAACCCACATACTAGCAGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGAGGAAGTCAGAGTCGGCCACTAACCAGATGCAAATCCCCACACTCTTCCCCTTAGCGCTTGACCGTGCCTCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CAGCTGCTAACTGGCCTCAAATGATGCATGTGAGCCCAGCTCCATGACCTTCTCCAGCTGAGGCAGGAGAATGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTACCTGACCACCATCACCAAGCAGATCACGCCCTACGTCCGCTCCATTGCCAAGGTGAAGGAGCGGCTGGAGC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCAGGTTTCAGGCACCCGTGGATGAGCAGTCAGAGAGTCTACAGAACACGCACGACGACAGCAGGAACAACGCG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCCTCAGCCAGGAATAATCCAGGAAGTGTCCCGGAAAAGAGAGAGAAGACATCAGAGCCTAAAGGAAACAGCTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GGCTCCGAACGGCCTCTCAGAAGAGCCTCTACTGAAAAATATGGATCATCACAGATCCAAACAGAAAAATGGGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCGATGTCCCCACATGGAGGGAACACCCGACTTAGCAAATGGGACCGGTCCCCAGGGTCAGGCTCTTAGAGCAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GCACAAGACTGGGACACTGGACAGAAGGTTGTTCCCATGATGGTTTTTTTTATTTTTTATTTTTGAGATGGAGT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTCGCTCTGTTGCCCAGGCTGGAGTGTAATGGTGCAATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCGCCTGACACCACGCCCCGCTAATTTTTTGTA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACGCCAGACCTCAGGTGATCCACCTGC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CTCAGCCTCCCAAAGTGCTGAGATTACAGGGGTGAGTCACCGCGCCTGGCCAATGTTGTTGTTGTTTTTAAGAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGAATTTCACTCTTTGTTGCCCAGGCTGGAGTGCAATGGCGCAATCTCTGGCTCACCGCAACCTCCGCCTCCCA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GGTTCAAGCGATTCTCCTACCTCAGCCCCCAGAGTAGCTGGGATTACAGGCATGTACCATCACACCCGGCTAAT 2812
Query 1 --------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGAT 54
|.|||||||||||||||.|||||||||||.||.|||||||..||||||||||||
Sbjct 2813 TTTTTGTATTTTAAGTAGAGAGGGGGTTTCTCCATGTTGGTCAGGCTGGCCTCGAACTCCCAACCTCAGGTGAT 2886
Query 55 CCGCCCACCTCAGCCTCC-------------------------------------------------------- 72
|||||||||||.||||||
Sbjct 2887 CCGCCCACCTCGGCCTCCCAAAATGCTGGGATTACAGGGGTAAGCCACTGTGCCCGGCCGGTTATTTCTTTAAA 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 AGGTAATCATTTGTCAAGAGTAAAACCCAGAAGCTCTGACAGGCCATAATTTCAGATCCTTTGGCTTGGGCAGT 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 TTTGATTTTCCCCGTGTTTGCATGGCATGAAGTCTTCGTCCTTGTCACAGTAGCTTGGGATGACTCCCAGTCCA 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 CATGGAAAACATCAGGGAGTGACAATCCAGCAAGAAATCCCTCGCTAGTTCCACACCTACGCACCGAGCGTCGG 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 TGTGCCAGGCCCTGTGCTGGGCAGAGTGTGGTATGTCAGGGTGTGCCGGTTTTAGGTAACAAGACTCCACCACT 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 GAGTGGCACCTGCCCTATTGCAAAGGAATCCAGTTCCTCCGGAATAACAGTCCCACTGTTAACCTGGTGCTACT 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 GGGAAGTTCCACACAGTAATCTGAGCAGTGACTCATGGAAGGATGAGGAACGTTTGCTCCAGCTTCTCTCCCTT 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 TCCAGCAAGGGCAGAGCTCCTAAAGCCAGGGGTTAGCACCTGGCCAGCTTATGTGGCAGATGGTCTCAGTTACA 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 ACTTCGCTGCTTTCCCAAACTCCTGCAGCCCTCCTGAGTCCGACTTCCGTTGATAGCAAGGCACTGGGTGGCAG 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 CAACCTTTTTTCTAGTAGTTTTTTCCCAGCAGTTTTCCATTTCTCCACAGTATCCTTTTCATTTAGAGGAGCTT 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 AATAAATGCTTTTTAAAAAGTAACCCACGTGACGTAAAATTTTACAAGTTTTTGTGGCAAAATGATGCCCAGAT 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 AGTCACATTTAAGCAAATATTCAGCTTGATTCAGTGATTAACAGCAAATGGGTCTACGTGCTAACATGGCAGCA 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 CATTCAACACATAACACATCACTCACATTGACGTCCACTGTCCCTGCACCTGCTACTTCAGGGGCACTGAGGCT 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 CCTGTTCCAAGGCCTTACAAACCTATGTGGTGGCCTGCAGGGCAAAAGGAATTATCATTACAACTGGTTAGAGG 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 TAGGAATTCAGAAAGAAATTGAGGAGGCCAAACACACGTCGTTTGAGGCTAAAGGCTTAAGACGCTTCTTACCC 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 AAGAGTGACCTCAGAGTTTCACATCCCAGACAATCACACTGTGGTTGAGTGAAATCAAGTGCAGTTTTATTTAA 4070
Query 73 ---------------------------------------------------------------------- 72
Sbjct 4071 GAACTGGAAAGAATAATCAGTATCTGTGAAAGAAAATCCAATTTAGAATATTTAAATAAACATTTATGTA 4140
