Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10261
Subject:
XR_946652.3
Aligned Length:
4126
Identities:
65
Gaps:
4054

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCAGCCACCCTGGGGAAGGTGGATGCCGGAAGAGGCGTCGCCTGCGGGTCACCCAGAGGACACCCGGCGGGGAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTCCGAGGGTGGGAGTGAGGAGAGGTAGGAGAGGCCACGGCAGAGGGAGGCCCCGCGCAGAGTGGGAACCATCG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCCGGTGCGGGCCTGAACTTCCAGGGCCGGCTACTCCTCGGCAGAGCGACCGCGCGGTGTCTCAGAGCGCGGCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGGAGCCGCACTAAGAGCGCTGGACGGCGGGAGAGAGGCTCGGAGGACCGGTAGCTCCCAGCAAAGCGGCCCAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CGGATGTCGGGAGCTATCTTCGGGCCCCTGGAGGGCCCGAGCTCCCTGGATGCCCCGAGCATCCACCCGCTGGT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GTGCCCGCTGTGCCACGTGCAGTACGAGCGCCCGTGTCTTCTGGACTGTTTCCACGACTTCTGTGCCGGCTGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGCGTGGCCGCGCGACCGACGGCCGCCTCACCTGCCCGCTGTGCCAGACGTGGAGACCACGTACTTCTGCAACA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CGTGCGGACAGCCCCTATGCGCGCGCTGCCGCGACGAGACGCACCGAGCACGCATGTTCGCGCGCCACGACATC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GTGGCCCTGGGTCAGCGAAGCCGCGACGTGCCCCAGAAGTGCACGCTGCACGCAGAGCCCTACCTCTTGTTCTC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CACCGACAAGAAGTTGCTGTTGTGCATCCGCTGCTTCCGCGACATGCAGAAGGAGAGCCGGGCACACTGCGTGG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACCTGGAATCGGCTTACGTGCAGGGCTGCGAGCGGCTGGAGCAGGCGGTGCTGGCCGTGAAGGCCCTGCAGACG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GCCACGCGGGAGGCCATCGCGCTGCTGCAGGCCATGGTGGAGGAGGTGCGGCACAGCGCCGCCGAGGAGGAGGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CGCTATCCACGCCCTCTTCGGCAGCATGCAGGACAGGCTGGCAGAGAGGAAAGCGCTGCTGCTGCAGGCTGTGC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGAGCCAATACGAAGAGAAGGACAAGGCCTTCAAGGAGCAGCTCTCTCACTTGGCCACCTTGCTGCCCACCCTG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CAGGTCCACCTGGTCATCTGCTCCTCCTTCCTCAGCTTGGCCAACAAGGCTGAGTTCCTGGACCTGGGCTATGA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GCTGATGGAGAGGCTGCAGGGCATCGTCACGCGGCCGCACCACCTAAGGCCTATTCAGAGCAGCAAGATTGCCA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTGACCACCGAGCTGAATTCGCGCGCTGTCTGGAGCCACTGCTGCTGCTGGGGCCACGTCGGGTGGCAGCTGCT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GCAAGTGGTGCTAACACGCTGGCAGGGGGCTTAGGCCCCAAGGCGCTGACGGGGCCCCACTGCCCCTCCCCAGT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AGGAAAGATGTCGGGGTCACCCGTCCAAAAGCCCACGCTGCACCGGTCCATCAGCACCAAGGTGCTGCTGGCGG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGGGCGAGAACACGCCCTTCGCAGAGCACTGCCGCCACTATGAGGACTCCTACCGGCACCTGCAGGCAGAGATG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CAGAGCCTAAAGGACCAGGTACAGGAGCTGCACCGAGACCTCACCAAGCACCACTCGCTCATCAAGGCGGAGAT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CATGGGAGACGTCCTGCACAAGTCCCTGCAACTGGACGTGCAGATCGCCTCGGAGCACGCCTCCTTAGAGGGCA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TGAGGGTCGTCTTCCAGGAGATTTGGGAGGAAGCCTATCAGCGAGTGGCTAATGAGCAGGAGATTTATGAAGGT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TCCAGACAGTTGGCTGCCGAGTGAACCCTCTGTCCCTGAGCTAACCCACATACTAGCAGAGGAGGAAGTCAGAG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TCGGCCACTAACCAGATGCAAATCCCCACACTCTTCCCCTTAGCGCTTGACCGTGCCTCCCAGCTGCTAACTGG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CCTCAAATGATGCATGTGAGCCCAGCTCCATGACCTTCTCCAGCTGAGGCAGGAGAATGCCTACCTGACCACCA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TCACCAAGCAGATCACGCCCTACGTCCGCTCCATTGCCAAGGTGAAGGAGCGGCTGGAGCCCAGGTTTCAGGCA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CCCGTGGATGAGCAGTCAGAGAGTCTACAGAACACGCACGACGACAGCAGGAACAACGCGGCCTCAGCCAGGAA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TAATCCAGGAAGTGTCCCGGAAAAGAGAGAGAAGACATCAGAGCCTAAAGGAAACAGCTGGGCTCCGAACGGCC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TCTCAGAAGAGCCTCTACTGAAAAATATGGATCATCACAGATCCAAACAGAAAAATGGGGGCGATGTCCCCACA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TGGAGGGAACACCCGACTTAGCAAATGGGACCGGTCCCCAGGGTCAGGCTCTTAGAGCAGGCACAAGACTGGGA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  CACTGGACAGAAGGTTGTTCCCATGATGGTTTTTTTTATTTTTTATTTTTGAGATGGAGTTTCGCTCTGTTGCC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  CAGGCTGGAGTGTAATGGTGCAATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CAGCCTCCCGAGTAGCTGGGATTACAGGCGCCTGACACCACGCCCCGCTAATTTTTTGTATTTTTAGTAGAGAT  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACGCCAGACCTCAGGTGATCCACCTGCCTCAGCCTCCCAAA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  GTGCTGAGATTACAGGGGTGAGTCACCGCGCCTGGCCAATGTTGTTGTTGTTTTTAAGACAGAATTTCACTCTT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TGTTGCCCAGGCTGGAGTGCAATGGCGCAATCTCTGGCTCACCGCAACCTCCGCCTCCCAGGTTCAAGCGATTC  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  TCCTACCTCAGCCCCCAGAGTAGCTGGGATTACAGGCATGTACCATCACACCCGGCTAATTTTTTGTATTTTAA  2812

Query    1  ------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGC  68
                  |.|||||||||||||||.|||||||||||.||.|||||||..|||||||||||||||||||||||.||
Sbjct 2813  GTAGAGAGGGGGTTTCTCCATGTTGGTCAGGCTGGCCTCGAACTCCCAACCTCAGGTGATCCGCCCACCTCGGC  2886

Query   69  CTCC----------------------------------------------------------------------  72
            ||||                                                                      
Sbjct 2887  CTCCCAAAATGCTGGGATTACAGGGGTAAGCCACTGTGCCCGGCCGGTTATTTCTTTAAAAGGTAATCATTTGT  2960

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2961  CAAGAGTAAAACCCAGAAGCTCTGACAGGCCATAATTTCAGATCCTTTGGCTTGGGCAGTTTTGATTTTCCCCG  3034

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3035  TGTTTGCATGGCATGAAGTCTTCGTCCTTGTCACAGTAGCTTGGGATGACTCCCAGTCCACATGGAAAACATCA  3108

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3109  GGGAGTGACAATCCAGCAAGAAATCCCTCGCTAGTTCCACACCTACGCACCGAGCGTCGGTGTGCCAGGCCCTG  3182

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3183  TGCTGGGCAGAGTGTGGTATGTCAGGGTGTGCCGGTTTTAGGTAACAAGACTCCACCACTGAGTGGCACCTGCC  3256

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3257  CTATTGCAAAGGAATCCAGTTCCTCCGGAATAACAGTCCCACTGTTAACCTGGTGCTACTGGGAAGTTCCACAC  3330

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3331  AGTAATCTGAGCAGTGACTCATGGAAGGATGAGGAACGTTTGCTCCAGCTTCTCTCCCTTTCCAGCAAGGGCAG  3404

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3405  AGCTCCTAAAGCCAGGGGTTAGCACCTGGCCAGCTTATGTGGCAGATGGTCTCAGTTACAACTTCGCTGCTTTC  3478

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3479  CCAAACTCCTGCAGCCCTCCTGAGTCCGACTTCCGTTGATAGCAAGGCACTGGGTGGCAGCAACCTTTTTTCTA  3552

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3553  GTAGTTTTTTCCCAGCAGTTTTCCATTTCTCCACAGTATCCTTTTCATTTAGAGGAGCTTAATAAATGCTTTTT  3626

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3627  AAAAAGTAACCCACGTGACGTAAAATTTTACAAGTTTTTGTGGCAAAATGATGCCCAGATAGTCACATTTAAGC  3700

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3701  AAATATTCAGCTTGATTCAGTGATTAACAGCAAATGGGTCTACGTGCTAACATGGCAGCACATTCAACACATAA  3774

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3775  CACATCACTCACATTGACGTCCACTGTCCCTGCACCTGCTACTTCAGGGGCACTGAGGCTCCTGTTCCAAGGCC  3848

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3849  TTACAAACCTATGTGGTGGCCTGCAGGGCAAAAGGAATTATCATTACAACTGGTTAGAGGTAGGAATTCAGAAA  3922

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3923  GAAATTGAGGAGGCCAAACACACGTCGTTTGAGGCTAAAGGCTTAAGACGCTTCTTACCCAAGAGTGACCTCAG  3996

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3997  AGTTTCACATCCCAGACAATCACACTGTGGTTGAGTGAAATCAAGTGCAGTTTTATTTAAGAACTGGAAAGAAT  4070

Query   73  --------------------------------------------------------  72
                                                                    
Sbjct 4071  AATCAGTATCTGTGAAAGAAAATCCAATTTAGAATATTTAAATAAACATTTATGTA  4126

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