Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- XR_946659.3
- Aligned Length:
- 4873
- Identities:
- 62
- Gaps:
- 4805
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AATTGGTACCAGGAGAGCCCAGAAGCCACACACGCATCTCTGCCTCTTTGCTCTGGCTCTCCCACCCTCTTCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTCTTTCTCTGCTTCCTTGTCACTGTTACTCCAGGAGACGTTCACTTTTCACCAACCTTTCTCCAAGCATCTCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGCCACTGACTATATATATTTTGCTACAAGAGACCTAGAAGAGGAAAAAAGGCACGAGACTTTTCAACACATC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTTTAAAAAAATCATCAACGAATTTCTTGCAATGTTTGAGAACAATTAAAAGGAAAAAGCGTTTTTTAAAAAAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTATCAACTAAGTGAACAATCATTCATATCGTCTACATCCTGAGATATTATTGTCCCTCGCTGCGGACACCAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGATGACAGCTGCTTTTTCATTTTTGAATGTAATAAATATTTGCTGCTTTTAATATTTTCCGGAATCTCCCCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGCTATTCCTTGGAATTTTAACTCTAAAGATTGGAGAACAGATTATCAAAAAGGCTTTTGCAAGCCTCCAAAAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GATGCTGAGTCCGGACCAAGCAGCAGATTCGGACCATCCCAGCTCGGCGCACTCGGATCCGGAGTCCCTGGGCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCACGGACACCAAGGTGCTCGGCAGCGTGTCGGACCTGGAGCCGGTGGAGGAGGCCGAGGGCGACGGCAAGGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGCAGCCGAGCCGCGCTCTACCCGCACCCGCAGCAGCTGAGCCGCGAGGAGAAGCGCCGCCGCCGGCGCGCCAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGCCAAGTACCGCTCGGCCCACGCCACCCGCGAGCGCATCCGCGTGGAAGCCTTCAACTTGGCCTTCGCCGAGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCGCAAATTGCTGCCCACGCTGCCCCCGGACAAGAAGCTCTCCAAGATCGAGATCCTGCGCCTGGCCATCTGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TACATCTCCTATCTCAACCACGTCCTGGACGTGTAGGGCGGGGTGCGCCGCGGGGGGCCGCCTGTCCCGGCGTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CGCGAAACGCTACGGATCCGGACGGGCGCCGTCGCTCGGGTGGCGGAGGCTGCGGTGGCCCAGCGAGACGGCCG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCTCGAGAGACGGCCGGGGAAGAAGCTCGCTACCTGTTCTCTCTGGTCAGCAGGGCGACGAGGGAAGGTTTCCG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACGCAGGCAGGAGAGGATCTTTGCAATGTCATTTCAAATCCAAAGCTGCTGAGCACCCTCCAAGAGAGACAAGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATGGTGGCAGTCTGCTAGACCAGAGGGTGACTGGCTCATTCCCTGAGCACAGCGCAGACACAGTGATTATTCGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCATCCATGAGGTCTCGATTCTTCTTTGAATGACGATGCCACTCAACAACTTGCCAGGCCATTGCTGCTCCCCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAAAGCCTAGCCCCAGCTGGCCCAGCGGACAAGACTGCCTGTGCTGAATATTTCTCCACCCAAATGGACTTCCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTCACTTCTACCACTGCCCGGAAACTTCCAGAGAACAAGGGTAAAAGTATTGGGCAAAACAACCTTCCTCTCCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGGAGAGGGGAAGAGGAGGGGCAGTGTATGATGGGATGGGATGGTAAAGGAAGGGCCGACTGAGGAGAGAGGAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGGGTAAGGAGGAAATGAGACTGGGTGGGAGTGGGGGACTCTGGAGGGAATACCCGCTTCCCACAGGAATGCTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTTGCAGGAGCTCCCTCCAGTGGCCCTGCCCCATGAACACGTATCACCAGAGCACTATGATAAGGCGAGTAGCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGAGCCAGCCTCTGTGATGCTGTGATTTATCCAACTCTCCTCACTGCTGTCTCTGGCTACCAGTTTTCTTGCTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATGTTTGGGGTGGAGAGAATTTAAGGGGAGAAGAGGGCCAACTTAAGAGCATGCACAGCCAATACCCTTTTCCA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TATTTAGATGTGCTATCTCATTTATCAGTATTAGTAGTCGAAATAATAGCTAATGTGGGTTGAGTGTATACTAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATGCTTACTAAAGTGCTTTGCATGCATTATCTCCTGTAATTCTCACAACCACCCAGTGAGGTAGGTACTTTTAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGTCTCCATTTAACAGATGAGGAATTTGAGGCTTAAAGAAATTAGATGACTTGCTTAGGGCCATGAAGCCATGT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTATCAGTTTATCAAAGTGCCTGCCCCTACCCATCATCCTCTAGAGTTGTCCTTTGATAGAGGGGTAGCTGTGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CACTCACACACCACCCCCCTTGGTGCCTGCACTGCATCTTTCCATCCATGTGCCTAGGGAAAGCTTCAGCTCAT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GTAATGCCTAAGGAGTGCTGCGTCTGCAGTACACACAGCTGCCCAACCAATGGGACCAGTGGAGGCCAAAACCA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGCCTGTGCTCTGTATGCCAAGTCAAGCATGTGCCTTGGCTTGAAGTTGGACTACCTGGAGGAAGGGGAGCATT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTTCTACTTTGCAAGAAAACACTATAGGATAATGGTGGCCCTGTGACAACTCCCCCACCAGGGCACCGTCATTC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACTACCACATGGGTGAGGCTGGCTCCATCCACACTCCTCTGCACCTTCCAGCCCATTCTCACGCTGCTTCTAGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CCTATCTTTAAAAATTAGCGTGCCATCCTCCTTCGTGAATGTCCATTTTATTTTTTAATAAAATTCAAGTTCCC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AATCTAGGCATAGAAATGTTTCACAGTCTTGTTCCAGACCCTCACTAGTGCCATTTTCAGCCACTCTCCAGAGA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTAAATATTCCTGCAAACTCGGTTTCCTCACTTCCCCAGAGAGGCCAAGTCTTTTTCTTTTACGACCTGGGCCT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTGTATTTACTTCCCCTTTACTCACAATGCTCTCCCCTAACCTCATTTTTTACCCAGAAAATTCCGATGATTCC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACTGTGACCCAACTCAGACCACACGTAACCACACGTATCATTACAAAGCTTTCCGTTTCTTTCAGAAGCATTAG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CTGCTCTGTTCTCTGAGTCCCACATACATACATCGTTTTAACTGAATTTACCTGTTTCTCCCATCTCTGTGTTT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GAGACCCAAGACTCTGGAGCCAAGTTCGGGCCCTGGCTCCAATTATTCTAAGTGTATGACATTGAACATGTTAC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TATATCTCCTCAAGCCTCCATTTTCATCCATAAGATGGGACAACGTATGTACCAATCTCAAATGCATGTCATGA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GGTTTCCATGGGATAATGTATAGTGCTTATCAGAATAGGAATACATGGGAAGTGCTCAATAAATGTGAGCTATT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TTCATTACCTTTGTATTTATAATATGCACAGGAATTAACATAGGATAAGCTAAAATCAGCTTTAATTCTTTAAT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ATAGTAATGATTTGTGGTTTCCACCAACTATATCCATCTGCATATGATACATTACTAACTCAACAGTCAGCCAG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AAATCATCCCCATCTTCTAAGACAGGAAGCATAGGTAAATTAATAGTCATCCATGGAATACACCACACATGCAC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 ACCTGTAGAGTTATCTACAGGTCTGAAAGCCCCACTCGACTCATGATAAAGGCCCAGTCTATGCCTTTTCTCTT 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TTACCTTGGTTTTTCCCATAGCACGAATGCTGTGATAAGCACTATAGCAGACTGGTCAGAAGCACAGACTCTGT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CAAAGCTAATTTTTAAAGATAGGTCTAGAAGCAGAGGGCCAGTTTTCAGGCCTGCTCACCCATGATAGGTCAGG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CAGAGGGGGATGAGCGGGCACTCACATCCAATGTGTGTGTACGAGCAATTGCCAAAGTTAAGGACGACAAGGGG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TAAATTTTTTTTTTTTTTTTTGAGACCAAGTCTCGCTCTGTGGCCCAGGCTGCAGTGGTGCAGTGGCGCAATCT 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 TGGCTCACTGCAACCTCCACCTCCCAGGTTCAGGCAATTCTTCTGGCTCAGCCTCCCGAGTAGCTGGGATTACA 3848
Query 1 ----------------------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTG 28
|.||||||||.||||||.||.|||||||
Sbjct 3849 GGCATGTACCACCATGCCCAGCTAATTTTTTGTATTTTTTGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTG 3922
Query 29 GTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCT---CC--------------------------- 72
||||.|||||||||||||||||||||||||||.|| ||| ||
Sbjct 3923 GTCTTGAACTCCTGACCTCAGGTGATCCGCCCCCC----CCTAGGCCTTTCAAAGTGCTGGGATTACAGGCGTG 3992
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3993 AGCCACCGCGCCCAGCCAGACAAGGGGTACATTTTTAAGATAGAAGGAAAAGTCATCAGGGAAGGTGGGTTAGA 4066
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4067 TCAGCTGTGAAAGTCCCCTCAAATATGCAAGTGCTCACAGATGATTTTCAGGAAATACTGTTCGTTTTACTGTG 4140
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4141 ATAATGGTATATTTGTTGTTAAAAGAAAAAAGAGTCCTTATCTTTTAAGAGATACTTACTGATGTCTTCATGGA 4214
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4215 TGAAATGATGTGATGTTTGGGATTTGCTTCAAAAAGTCTTAAGGGGTAGTGAGAAAGACAGGATAAGAAAATAA 4288
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4289 ATGAAATGTACTTATTGGTGTTGTGTATATTTGAATCCATTTCACTATTCTCTTGGCTTTTGGAGATGTTTTAA 4362
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4363 CAGTTTTCCATAAGAGCGTTTTTTAAAATGTAGTTGCTCAGAAAATTTGTGCCAGTTGATTTTTACTCACCAGG 4436
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4437 AAGTCGACTCCCGCTTAAACTAAGGCCACCACCCTCTTTCACAGAGCTCCACCCTTTAGCACAAGTCACCTCAT 4510
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4511 GCCACTCAGAGAACCATCTCCAGCCCTGGTTACTTTTTGTGAATGCACCAGGTATTGCTCCACAGAGTCATCTC 4584
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4585 TGGAGAAAGTTTTTTTCTTTGTCTTTGGTCAATGATCCTCTGTCCCTCTTGGCAGACTGACTCCAGTGGCCTTT 4658
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4659 TATTTTCAGTTATTCCATCCTAACCCCAGGGAATCCTAAGAGGACCCGCCCCCATATACATATCTACCAATCAC 4732
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4733 ACCACCTTTCTCCTGATTCAAGAAGCCCCTGAAATCTTCCCTTTTTCTGATATATTGCTGGAATGATCAGCAAG 4806
Query 73 --------------------------------------------------------------- 72
Sbjct 4807 GAGATGAAGAACTCCCTCCTGACCTGGAAATACTTACTGAAATGAAGCAGGAAATTCCAACAA 4869
