Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- XR_946980.3
- Aligned Length:
- 3049
- Identities:
- 65
- Gaps:
- 2977
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CACGCCGTGAAGTCATAATCCTGTGTCTGTGACACCCTGTCGGTTGCTATGGAAACGACTCGCTGTTAAACACT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCGTTCTCAATGAGGGTTGCAGGGGTTCCGAGGCGGACCTGGGGAGCAGAAACCCCTGTTTAGGGTGAACCGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCGGGCGCCGATGGCCTCTTGGAAGAGGACAGACTAGCAGCTGCGAGGGAGATGGGACTGGGTTTCACCCCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAAGGGCCCCTGGAGACAGCGGGTGAGGGACAGGGGAAGGGGCTGGTGGTCCTCTCTCCCGAGGCCCCGCACCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCACACGGATGACTTGGCACAATAGCTGCTGGGCCAGTGTTGTCGCCTGTGACTGTACTTTAGGGAAACTGACA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGGAGATCATGATGTCGCCATTTTGATGGGGTCCCCAGAGGAGAGATGTCCTCCCCAACGGCTCCTGGACAGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGGGGAAAGAGTTCAGATAAGTATCTCTGTGGTCTGGGCTGTCACCTTACAACTGCACAACTCTGGACCTCCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCATCAGAACCACTGGGGCCTAGGTTAATAATACAGATTTTCAGGCTCCAATTTGGACAGACGAAACTGATCTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGGGTGGGACCCAGGAATCTACGTGTAAACAAGCACCCAGGGGAGTTCTGCTCACTGAAATTTGAGAATCCCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATTTAGAAGGAGGACTATGCTCTGTGCATGTTCTCTGAAATGTTGGGTCAATCAGGACCTGTCTACTGAAACT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCTCCAACCAGCCAAGGTGCAGAGAAAAGATGCGTGCAGGGCCGAAAACCAGGGTGCTCTGGAGGCAGGGAGCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCGAGAATGTAAAGCCAGCAAGCTGTTACAGAGTGATTTGCACAGAACAGACACTCAGTTGATATTTGTCAAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTGCTGTGTTTAAGAACCTTGCTGAATTAATTTAAAAGGTATTTTTAAAAGAATGAAATTGAGGAAAAAACCTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAAGGTTCAGAAAATGTGAAGTTCTCATTTACTTGTTTATGAAATTGTTTTTGAGTCCAATAAAGATGCTCAGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TAAAATGGTTTTTTTGTTTTAAATCTCAGAATTAAGTTTCTCTTAGTTTTGGGCAGTTCGGTCCAGCTACTTGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAAAGACAGGCTTCCATATCTCCTGTATGCAGCCCTGAAGGACCCAACAGAAGTAAAATAGTTATTTAAGGAAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GCAAAGGACTAGGGACAGGATGCAGATTAAAATGTTTAAGATGATGTCTGCAGATGATGTTTGTAGATGCTTAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTTTGTTGAATTCTTAGTCTTCCTCACAAAGCAGCTAATTACTTTCAAGACTCTAGTGAGCCTCAATTTACTCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AATTTATGATTTCCAATGGTTCTGCATAAAACTGGGTTGCCGTTTTATGAAATTGTTTGCATCTGCTTGACGTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGCGCAAACTTCACAGTGAGGAGATAATGTGAGGGTTTTGCCTTCTTGCAAAACAACTTACATATATATGTGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAAACTGGGGTTGGGGTTTGAATTATGTGGACTGCCTGTGCGTAGTAAGCTCTCTGGTCAGTTACCTATTTGGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTTGTGTGGACACAGCTCTTAGGAGGGAGGGTGGTGGAATTCCTGCTCATTACCTATAGTATCTTGCAGGAGGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTGCTGAACGCCGGAGCCTTACAACTGTTAAACTCAGGCAGAGCTCGGGAAATGCTGCCCGGATGGGTGACTGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGGAGAGGGGCTACCACTCTTCCAGCTAAACTCCGCTCTGGTTGGGACCCAGCAATTATTTTCCATAGCGAAGT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTTAATAAAATATCTGTTACTCCCAACACAACCTCCTGGGGGAAGGGACCTGTCTGTCTGCTTCAACTTTGGAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCTCAGTGCCCACATCAGGATACCTGGCCTGAGAGAGGGTCCTGCCGGTATTACCCTGGAGGAAGGAATGCTGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACAGAGGCCGAGAGGAATTTGAACAGACTGGCCTTGCTGGGTTTTTATCTCTTTTTGTCCAATCCCATTTTGAC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ACAGTTGTCCATGCTCCAATCATGCTTATCCAATGAAGTTTCCATAACAGGCCTGAGAGGACAGGGTTCAGGAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTTCCGGACAGCTGAGCAGGTGGAGGTTCCTGGAGGGTGGTGTGCCAGGGAGGGTGTGGAAGCTCTGCCCCTTC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCCCATACCTTGTCCTATGCATTCCTTTATCTGCATCCTTCATTTTATTTTATTTTTTTTTGAGACGGAGTCTT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCTCTTGTCGTCCAGGCTGGAATGCAGTGGTGCGCGATCTTGGCGCACTGCAACCTCCGCCTCCCGAGTTCAAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGATTCTCTTGCCTGAGCCTCCCGAGTAGCTGGGATTACAGGCACCCGCCACCATCCCTGGCTAATTTTTGTAT 2368
Query 1 -----------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACC 63
||||||||||.||||||.||.||||.|.||||.|||||||||||||||||||||||.||||||
Sbjct 2369 TTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGTTAGTCTTGAACTCCTGACCTCAGGTGATCCACCCACC 2442
Query 64 TCAGCCTCC----------------------------------------------------------------- 72
|||||||||
Sbjct 2443 TCAGCCTCCCAAAGTGCTGAGATTACAGGCGTGAGCCACAGTGCCCGGCCTGTATCCTTTATAATATCTTTTAT 2516
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2517 AAACAACCAATCAGTAAATGTGTTACTCTGACTTCTGTGAGCTGCTCTAGCAAATTAATCAAATCCACAGAAGG 2590
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2591 GTCATGGGAACCCCAACTTGAAGCCTGTCCGTCAGAAGTTCCAGAGTCCTGGACTTGTGACTGGTGTCTGAAGT 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 GGGCAAGTCTTGGGGACTGAGCCCCTAGCCTGTGGGATCTGATGCTATCTCCACATAGATAGCAATGGAATTGA 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 ATTGGCGGGCACCTGGCTGGTGTCTGCTGCAGAGCTCATTGTTTGCTTAGTGGTGGAGAGAAGTCTCCCTCCAC 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 ATGTGGTCACAGCATCTTCTGTCTGTGTTGATTGCTTTTGATGTTGATCGAGAGAACAGGAAAAAGCACATTGA 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 ATGTCTCAATGATGAAGATGACAATAATCTGGCTTCTAGGTTGTTATGCGGCAGGCAACAGCTGTGCAGATCCT 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 AATAATCTACTCTGGGTGACAGTTTAACACAGGGGTTGGCAAATGTGGCCCACTTCCTATTTTTATAAATAAAG 3034
Query 73 --------------- 72
Sbjct 3035 TTTTATTGAAACATG 3049
