Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10261
- Subject:
- XR_949689.3
- Aligned Length:
- 4487
- Identities:
- 63
- Gaps:
- 4415
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCCAGCGTGGATGACAGAGCAAGATTTTGCCTCAAATAAATAATAAACAAACAAACAAAATGACAAACTGGACA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TAGGGGAAATCGCTGGCTTTGGTAAGGTCAAGCTGAAGAAAAGAGAGACTCAGGAGAACACTCGGCCGACCAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACCACTGAGCGGAAGTAGAGTGAAACTTCCTAAGAGCCTGGAAGGTACCCCCTGTCCTCCTCGAGCCTGCAGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTGATGTGGAGGAAGAGCCACCCACAAGATGCGCCTGAGCCACAAGCCACACCGTGAACCCAGGGCAGCTACG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACAGTGCCTGGTGCTTGGGGAGTGCTTGACAGATTCAGGTTGAAGAAACAAAGGCAGGTACAGGCAAGGAAGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AATGAGGGGACCGAGGAAGGTCGGAATGGCCCTGCTGGTCATCAGGACTTGTGGACCCACTGCCGCCTGCCCTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTATCCCCCACATCGTCCATCCCCCAGGCTCCAACATGGCCCAGTGGGGTCCCAGACACATTCGGGGGGCGGGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGTGGGCGGCGTTTCAGTCTGGGAGGAGGCCTTTTCCCAGGCCCTGTGGACCTCCCCACCGGCGGGAAGCGATC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTGCCAGGTGATCCTACCGGATCGCATCTGCAGAACTACAACTGAGCCGCTCTCTCGGGTGATTTGTGTCTCAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AACCACGCCAAGGCTGTAAATCAGGTGGTAGGAAGCTCTGTCTCCTGTTTTCCTGCTCAGCCAGACGGAGACAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AATGTACTGCCACCGGCTCCCAAATCTGGAAAACCAAGTCTGATTTAAGAGGAGATGTTTTAGCAGACATTAGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCAGGTCAGGGCTGGGGAGCAGGGTCTCTTGCCTCTCCCTTCCTGCTCCGAAGGAGAAGGAAACAGCCACCTCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCCCCAGCTGGGGGCTGAGTGGGTGGAGAACCTGAAAGGCAGGTGCCTAACAAGCCCTGGGGTTCGGTAGCAGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGCTTAGAGCTCCTCCCCGGGAGGCTCCGGAGGGGAATTTTCCACTGCCCCGTTCAATTTACCAGGACAATTTA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCTCAGCTATACCGCGGCCTTGACTATTTACAGTGGGGAGCGCAGGGCGGTGGAGGAGCCCTCTAAGAGTCCGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCAAGAGGGCCGCGGCCCAGCTAGAAGGGTCTGCAGGGGGCAAGGTGTGGCGGAGCGGGCTTCAGGCGCAGGTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTGCTTGCTTTCACCACGCCCCAGGTCTAGCTCACGGCCTGCACCTGGGATGTTGGGGCTGTGCAGAGGCGCCG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGGGTGGGGACCAGGCCCCCTTTTAGATAGGGAGGGGAGGAGCAGGGCCCCGGCTGCGGGGAGTTGGGAGAGAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCCAAAGCGTCTCCCCCCTCCCTCTGTTCCTGCTTTCTCAGGATGTCTGAGATGCCCAGCGTGGGTGAGTGCAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCTCCCTCCCTGGCTCTGCTCCTCCCCCTCCCCGGAACCACCACCCCCTCAGCCCTGAGCTGCCGATGCCCTCG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGGTTCTGTTTTCATTCCAGGCTGTGGATCCGGTCGTGGGAAGCAGAGTGAACTTCTAGGTTCTGAGCTGACTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTTGGAAACCCTAGACTCCAGGGACGCGCTTCTAGAACCTGCTCAGATTGCTACTCAGTTAACAGCCTGGCCCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGAGGATTGCAACACCCAGCCTGGCTCCCAGGCAAGCTAAAGAGGGCTTGATGATGGGAAGAGGTTAAGGGGTA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CGTGGAGAGAAAGAAGGATCAGAAGGCGGAAACATCATAGACCTCCTGGGATGCCTTCTGCAGGATCACAGAGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGGCAAAATTTGTCCTCCTGACTACAAGATGCCAAGATACATTTGTATCGAGCCACTGAATTCTCTACCCCTTC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGTAGAGGTGGTTGGGGAAGAGCTGCAGTAGGAAGCTGGGTCCCAAGTAATGAAGGACCTTTAGAAGCAGAAGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGTTAGGGTGGGGGCAAAGGACTGAACTCTGACCAACCAGAAGAAAGGAAAAACTGGAGTTCCTTTCCCCTAGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TCTGCCTTTCTTTCTCAGGGTCTCTATTTACTTCTCATGCACTTGACTCTCTGCTTCCCTCTCCCTCATTTCCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CAAAGGGGCCCAAGCTTCACATGCATCTCGCACCCCCGCACCTTGTGGGCAGGAAATCTGAGCACAGGCATTTC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTGTACGCTGATAAATGCCCACTGCAAAGAGCCCCAGCCTGAAGGTGGCCCTGTCTCCTAGTTATGTCCCTCCA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CATCCTTATCTCCCCAGGCTCCAGCCCTCACCAGCAGGGACTCAACAAACGCCATCTGTCAGATGAGTCATGGG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ACCAGAAGCTTGGGAGAAGACATGCAGAGCCAACCACTAACAAAACTGGCAAATGAAATAAATGCCCAGAAACC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGCTCCATCCCCAGCATTCCTTAAGTCCTATAAATTGCACCACCTTTTACCAGTTTTCAGAAACTAAAAGTCAT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCTTGACATCCGTCCAATCAATCACCTCCTATTTATCTCCCAAATTCATTCTTTTTTCTTTTTGAAACAGAGTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTTACTCTTGTTGCCCAGGCTGAAGTGCAATGGCACGATCTCAGCTCCCTGCAACCTCCGCCTCCCAGGTTCAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GCCATTCTCCTGCCTCAGCTTTCCTGAGTAGCTGGGATTACAGGCATGCGCCACTACGCCTGGCTAATGTTGTA 2664
Query 1 ------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCAC 62
|||||||||||||||||.||||||||||||||.|||.|||..||||.|||||||||.|||||
Sbjct 2665 TTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGGTCTTGAATTCCCAACCTGAGGTGATCCACCCAC 2738
Query 63 CTCAGCCTCC---------------------------------------------------------------- 72
||..||||||
Sbjct 2739 CTTGGCCTCCCAAAGTGCTGGGACTACAGGTGTGAGCCATTACACCCGGCAAATTCATTTTTATAATCTTGCCA 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 CCCCCACAACCACTGCCCTCATGGACCCTGGGCACGCCTCACCCGAATTACAGAAATTCCCTCCCAGCTGGTAA 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 AACTGTTTGTGTGTGGCTCTCCTTCATTCCATCCTCCCTGGTTTAGCCAGAGAAATAATTCTAAAATGTACACA 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 TCCCAAAGCATCTCATTTTCCTGCATGCAGTCTTTCATCATCCATTCACTAACTGGAGGACAACATCTGAATTT 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 ATTAGTGAGCATACAAAGGCTTTTCATCCGCTGAACCCAGCGCATCTGCTACCATTTCCCTGGTCTCCGGTCAG 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 AACTAGTGACTGTCCCATAAACAGGTTCTGCTGGACTTCCAGTCAAGATGGAGCGGTGAGTTCTCTGTTCCAAC 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 CACAAACCAGCAGTAAATAAAACATTTTCGCATATAACCCAACACACACAGTTGGGCTGAAAAACAAGGCAAGC 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 TTTCTGTGAACCAGAAGCAAGAACAGAGCCCAAAATCACTAAATGGGGCTGTGACTGACATGCTGCTGGGCTCT 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 GAGTCCCAAAGGGTTTTAGAGAAGCCAGGAGCCCAGTTACCTTAGAAAGGGCAGTGACTAAGATGAACACCAGG 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 GGTCTTCTGGAGGCCAAGAATGTTCTTTTTGTGCTCTGGGGGTTTATTACACAGGAGCATTCACTTTGTGAAAA 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 CTCATTGAGGTGCCCCTTTACGATTCATGTGCGTTTCTGTATATCTGTTATATTTCAATAGAAATGTTTACTTG 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 AAAAACTTTGTCCTGGGAGAAAGCCCAGAGGAAGACCCTACTTTTAGATGCTGGAGACCAGGGTAGGGTGAGGT 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 AAAGTGGGGTGGAAATAGAGCACAGCCTCAAAGTGAGGACCCATGCCAAGCCACCCACAGCTCCTCATCTGGAT 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 TGGCATCATTCTGGCACAGAATAAGGAACCATGAAATAACACGTAAGAGCTGGCGCTGGAACAGCGGCTTAGGA 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 AAATGGGTGGAGGCAACCACAAAACTATAAACTGTGCATTCAGGAAGAGAAGAAAAAAAGACAAAAACAAAACA 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 AATCAAAGGGGGAAAACTGCCACTAGAAATGGATCTGCAAATCAAAATTCCAAAACACATTTTAACAATGAAAA 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 AGTCTAATGCTAAGAAAGACAGTAAAATCAATAAACAACATTAATTCATTCCAGTTGACATCAGTTTTATAGAG 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 CAGAAGTCATAAAAATCTACCAATTTTATAGACTAGTACTAAAATCTATCAGTTTCATAGAGGATAGGTTTTGA 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 AGTATATATACATTTACATTTCTCAAAGAAATCATAAAAACATATTAAAAATAAGCAATAAATATTAGATGAAA 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 ATAGGAATGGAACAAGAAGAAGTGGGAATAAAAAAGATTAGGAAGGCCAGGCGCGGTGGCTCACACCTGTAATC 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 CCAGCACTTTGGGAGGCCAAGGCAGGCAGATCACCTGAGGTTGGGAGTTCGAGACCAGCCTGACCAATATGGAG 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 AAACCCTGTCTCTACTAAAAATACAAAATTAGCCAGGCATGGTGGCACATGCCTGTAATCCCAGCTACTCAGGA 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 GGCTGAGGCAGGAGAAGCACTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCCGAGATCATGCCATTGCACTCTA 4440
Query 73 ----------------------------------------------- 72
Sbjct 4441 GCCTGGGCAACAAGAGTGAACTCTGTCTCAAAAAAAAAAAAAAAAAA 4487
