Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10302
Subject:
NM_177229.3
Aligned Length:
876
Identities:
272
Gaps:
573

Alignment

Query   1  ATGTCAAGTTCAGGTTACCCTCCCAACCAAGGAGCATTCAGCACAGAACAAAGTCATTATCCTCCTCACTCTGT  74
           |||||||||||||||||||||||||||||||||||.|||||||||||.|||||||.|||||||.|.||.|||||
Sbjct   1  ATGTCAAGTTCAGGTTACCCTCCCAACCAAGGAGCTTTCAGCACAGAGCAAAGTCGTTATCCTTCACATTCTGT  74

Query  75  AAAGTATACGTTTCCCAGCACCCACCACCAGC------------------------------------------  106
           ..|||||||.||||||||.||||..|||||||                                          
Sbjct  75  CCAGTATACCTTTCCCAGTACCCGACACCAGCAGGAATTTGCAGTTCCTGACTACCGCTCTTCTCATATTGAAG  148

Query 107  --------------------------------------------------------------------------  106
                                                                                     
Sbjct 149  TTAGCCAGGCATCACAGCTTTTACAGCAGCAGCAGCAGCAGCAGCAGCTTCGAAGACGACCTTCCTTGCTTTCA  222

Query 107  --------------------------------------------------------------------------  106
                                                                                     
Sbjct 223  GAATTTCACCCGGGTTCTGACAGGCCTCAAGAAAGGAGAACTGGATATGAACAGTTTCACTCAGGACCCTCACC  296

Query 107  --------------------------------------------------------------------------  106
                                                                                     
Sbjct 297  GGTGGATCATGATTCCTTGGAGTCCAAGCGCCCACGCCTGGAGCCAGTTTCTGATGCCCATTTCCAGCGTGTTA  370

Query 107  ------------------------------------------------------------------AGGATCCA  114
                                                                             |||||.||
Sbjct 371  GTGCTGCGGTTTTACCTTTAGTTCACTCGCTGCCAGAAGGCTTGAGGTCGTCTGCAGATGCTAAGAAGGATTCA  444

Query 115  GCATTTGGAGGCAAACATGAAGCTCCATCCTCTCCAATTCTG---GGGCAACCGTGTGGAGATGATCAAAATGC  185
           |||||||||.|||||||||||||||||||||||||   |.||   ||||||||.|||||||||||.||||||||
Sbjct 445  GCATTTGGAAGCAAACATGAAGCTCCATCCTCTCC---TTTGGCTGGGCAACCATGTGGAGATGACCAAAATGC  515

Query 186  TTCACCTTCAAAACTTTCAAAGGAAGAGTTAATAGAGTGTATGGATCGTGTAGATCGAGAAATTGCAAAAGTAG  259
           ||||||||||||.|||||||||||.|||||||||.||.|||||||.||.|||||.|||||.|||||||||||||
Sbjct 516  TTCACCTTCAAAGCTTTCAAAGGAGGAGTTAATACAGAGTATGGACCGGGTAGACCGAGAGATTGCAAAAGTAG  589

Query 260  AACAGCAGATCCTTAAACTGAAAAAGAAACAA----------------------GTAA----------------  295
           |.|||||||||||||||.||||||||||||||                      .|||                
Sbjct 590  AGCAGCAGATCCTTAAATTGAAAAAGAAACAACAACAGCTAGAAGAAGAAGCAGCTAAGCCCCCTGAACCAGAG  663

Query 296  AAGTCTTCGTC---------------------------------------------------------------  306
           |||.||..|||                                                               
Sbjct 664  AAGCCTGTGTCCCCTCCTCCTGTGGAACAAAAACACCGTAGTATTGTCCAAATTATTTATGATGAGAATCGGAA  737

Query 307  --------------------------------------------------------------------------  306
                                                                                     
Sbjct 738  AAAAGCAGAAGAAGCTCATAAAATATTTGAAGGTCTTGGCCCAAAAGTTGAACTGCCACTCTATAACCAGCCAT  811

Query 307  --------------------------------------------------------------  306
                                                                         
Sbjct 812  CAGATACCAAGGTGTACCATGAGAACATCAAGACTGGAGTACCTGCAAGGCGCATGATGAAG  873