Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10302
- Subject:
- XM_017314391.1
- Aligned Length:
- 6726
- Identities:
- 272
- Gaps:
- 6423
Alignment
Query 1 ATGTCAAGTTCAGGTTACCCTCCCAACCAAGGAGCATTCAGCACAGAACAAAGTCATTATCCTCCTCACTCTGT 74
|||||||||||||||||||||||||||||||||||.|||||||||||.|||||||.|||||||.|.||.|||||
Sbjct 1 ATGTCAAGTTCAGGTTACCCTCCCAACCAAGGAGCTTTCAGCACAGAGCAAAGTCGTTATCCTTCACATTCTGT 74
Query 75 AAAGTATACGTTTCCCAGCACCCACCACCAGC------------------------------------------ 106
..|||||||.||||||||.||||..|||||||
Sbjct 75 CCAGTATACCTTTCCCAGTACCCGACACCAGCAGGAATTTGCAGTTCCTGACTACCGCTCTTCTCATATTGAAG 148
Query 107 -------------------------------------------------------------------------- 106
Sbjct 149 TTAGCCAGGCATCACAGCTTTTACAGCAGCAGCAGCAGCAGCAGCAGCTTCGAAGACGACCTTCCTTGCTTTCA 222
Query 107 -------------------------------------------------------------------------- 106
Sbjct 223 GAATTTCACCCGGGTTCTGACAGGCCTCAAGAAAGGAGAACTGGATATGAACAGTTTCACTCAGGACCCTCACC 296
Query 107 -------------------------------------------------------------------------- 106
Sbjct 297 GGTGGATCATGATTCCTTGGAGTCCAAGCGCCCACGCCTGGAGCCAGTTTCTGATGCCCATTTCCAGCGTGTTA 370
Query 107 ------------------------------------------------------------------AGGATCCA 114
|||||.||
Sbjct 371 GTGCTGCGGTTTTACCTTTAGTTCACTCGCTGCCAGAAGGCTTGAGGTCGTCTGCAGATGCTAAGAAGGATTCA 444
Query 115 GCATTTGGAGGCAAACATGAAGCTCCATCCTCTCCAATTCTG---GGGCAACCGTGTGGAGATGATCAAAATGC 185
|||||||||.||||||||||||||||||||||||| |.|| ||||||||.|||||||||||.||||||||
Sbjct 445 GCATTTGGAAGCAAACATGAAGCTCCATCCTCTCC---TTTGGCTGGGCAACCATGTGGAGATGACCAAAATGC 515
Query 186 TTCACCTTCAAAACTTTCAAAGGAAGAGTTAATAGAGTGTATGGATCGTGTAGATCGAGAAATTGCAAAAGTAG 259
||||||||||||.|||||||||||.|||||||||.||.|||||||.||.|||||.|||||.|||||||||||||
Sbjct 516 TTCACCTTCAAAGCTTTCAAAGGAGGAGTTAATACAGAGTATGGACCGGGTAGACCGAGAGATTGCAAAAGTAG 589
Query 260 AACAGCAGATCCTTAAACTGAAAAAGAAACAA----------------------GTAA---------------- 295
|.|||||||||||||||.|||||||||||||| .|||
Sbjct 590 AGCAGCAGATCCTTAAATTGAAAAAGAAACAACAACAGCTAGAAGAAGAAGCAGCTAAGCCCCCTGAACCAGAG 663
Query 296 AAGTCTTCGTC--------------------------------------------------------------- 306
|||.||..|||
Sbjct 664 AAGCCTGTGTCCCCTCCTCCTGTGGAACAAAAACACCGTAGTATTGTCCAAATTATTTATGATGAGAATCGGAA 737
Query 307 -------------------------------------------------------------------------- 306
Sbjct 738 AAAAGCAGAAGAAGCTCATAAAATATTTGAAGGTCTTGGCCCAAAAGTTGAACTGCCACTCTATAACCAGCCAT 811
Query 307 -------------------------------------------------------------------------- 306
Sbjct 812 CAGATACCAAGGTGTACCATGAGAACATCAAGACTGGAGTACCTGCAAGGCGCATGATGAAAAACCAGGTGATG 885
Query 307 -------------------------------------------------------------------------- 306
Sbjct 886 AGGAAAAAACTCATTTTATTTTTTAAAAGAAGAAATCATGCAAGAAAACAAAGGGAACAAAAAATCTGCCAGCG 959
Query 307 -------------------------------------------------------------------------- 306
Sbjct 960 CTATGATCAGCTCATGGAAGCGTGGGAGAAAAAAGTGGACAGAATAGAAAATAATCCCCGGAGGAAAGCAAAAG 1033
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1034 AAAGCAAAACAAGGGAATACTATGAGAAGCAGTTTCCAGAAATTCGAAAACAAAGAGAACAGCAAGAAAGATTT 1107
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1108 CAGCGAGTTGGTCAGAGGGGAGCTGGTCTTTCAGCCACCATTGCTAGGAGTGAGCATGAGATTTCTGAAATTAT 1181
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1182 TGATGGTCTTTCTGAACAGGAGAATAATGAGAAGCAAATGCGTCAGCTTTCTGTGATTCCACCTATGATGTTTG 1255
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1256 ATGCAGAACAAAGAAGGGTCAAATTCATCAATATGAATGGGCTGATGGAGGATCCAATGAAGGTTTATAAAGAC 1329
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1330 AGACAGTTTATGAATGTTTGGACTGACCATGAAAAGGAGATCTTTAAGGACAAGTTTATCCAGCATCCAAAAAA 1403
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1404 CTTTGGACTAATTGCATCCTATTTGGAAAGGAAGAGTGTTCCTGATTGTGTTTTATATTACTATTTAACCAAGA 1477
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1478 AAAATGAGAATTATAAGGCCCTCGTGAGAAGGAATTATGGAAAACGCAGAGGCAGAAATCAGCAGATTGCCCGT 1551
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1552 CCCTCACAAGAAGAAAAAGTAGAAGAAAAGGAAGAGGATAAAGCAGAAAAAACAGAGAAAAAGGAAGAAGAAAA 1625
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1626 GAAGGATGATGAAGAAAAAGATGATAAGGAAGACTCTAAAGAAACAACCAAGGAAAAGGACAGAACGGAAGCCA 1699
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1700 CAGCAGAAGAACCTGAAGAAAGAGAGCAGGTCACTCCAAGGGGGCGAAAGACTGCTAACAGCCAAGGCCGCCGG 1773
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1774 AAGGGCCGGGTCACCAGGTCGATGACAAGTGAAGCTGCAGCTGCCAATGCTGCTGCTGCAGCCACTGAGGAGCC 1847
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1848 CCCGCCACCCCTGCCGCCACCACCAGAGCCCATTTCTACAGAACCTGTTGAGACTTCAAGATGGACAGAAGAAG 1921
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1922 AAATGGAAGTTGCTAAAAAAGGCCTGGTAGAACATGGTCGTAACTGGGCAGCCATTGCTAAAATGGTGGGAACT 1995
Query 307 -------------------------------------------------------------------------- 306
Sbjct 1996 AAAAGTGAAGCCCAGTGCAAAAACTTCTATTTTAACTATAAAAGACGGCATAATCTTGACAACCTTTTGCAGCA 2069
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2070 ACATAAACAGAAAGCTTCACGGAAACCCCGTGAGGAACGAGATGTATCTCAGTGTGAAAGTGTTGCTTCCACTG 2143
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2144 TTTCTGCCCAAGAGGATGAAGATATTGAAGCCTCAAATGAGGAGGAAAATCCAGAAGATAGTGAAGCAGTTCCA 2217
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2218 ACCACAAAACCAGCAGAAAGGGAAAGCGTGGAGGCCCAGGTGACCGACAGCGCCAGTGCTGAGACCGCAGAGCC 2291
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2292 GATGGACGTAGACCATGAGGAGTGCGGTGCCGAGGGCAGTTCTGTTCTTGATCCACCAGCCCCTACCAAAGCCG 2365
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2366 ACTCCGTGGACCCAGAAATGCAGGTACCAGAAAATACTGCGTCTAAAGGTGAAGGGGATGCCAAGGAAAGAGAC 2439
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2440 TTGGAGAGCACCAGTGAGAAGACAGAGGCTAGAGATGAAGACGTGGTAGTGGCTGAACAGATCGAGAGGCCTGA 2513
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2514 GCCACAGTCAGACGACGACTCCAGTGCCACTTGCAGTGCGGATGAGGGTGTGGATGGAGAGCCAGAGAGGCAGA 2587
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2588 GAGTGTTTCCCATGGATGCAAAGCCTTCATTGTTAACTCCTCCTGGATCTATCCTAATCTCATCCCCTATTAAA 2661
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2662 CCAAACCCATTGGATCTGCCACAGCTTCAGCATCGAGCTGCTGTTATTCCACCAATGGTTTCTTGCACTCCATG 2735
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2736 TAATATACCAATTGGAACGCCCGTAAGTGGCTATGCTCTTTACCAACGGCACATTAAGGCCATGCATGAGTCAG 2809
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2810 CACTCCTGGAGGAGCAGCGGCAGAGGCAAGAACAGGTAGACTTGGAATGCAGAAGCTCTACAAGCCCATGCAGC 2883
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2884 ACTTCTAAGAGTCCAAACAGGGAGTGGGAAGTCCTCCAACCTGCTCCGCATCAAGTGATAACTAACCTTCCTGA 2957
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2958 AGGGGTTCGGCTTCCAACAACACGACCAACCAGGCCACCACCTCCCCTCATCCCATCATCTAAAACCACAGTGG 3031
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3032 CATCAGAAAAACCATCCTTTATAATGGGAGGGTCTATCTCACAGGGAACTCCTGGCACTTACTTGTCTTCTCAT 3105
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3106 AATCAGGCTTATCCACAAGAAGCCCCTAAGCCCTCCGTGGGGTCTATCTCTCTGGGATTGCCCCGGCAGCAGGA 3179
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3180 GTCTACCAAAGCAGCTCCTTTGACCTACATCAAGCAGGAAGAATTTTCTCCGAGAAGCCAAAACTCACAACCTG 3253
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3254 AGGGTTTATTGGTCAGAGCGCAGCATGAAGGTGTGGTCAGAGGCACTGCAGGGGCTGTCCAAGAAGGAAGTATA 3327
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3328 ACTCGGGGAACTCCAGCCAGCAAAATCTCAGTGGAGACCATTTCATCGTTGCGGGGCTCTATTACCCAGGGGAC 3401
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3402 CCCAGCTCTGCCCCAGGCTGGAATACCAACAGAGGCTTTGGTGAAGGGACCTGTCTCCAGGATGCCTATTGAAG 3475
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3476 AAAGCAGTCCTGAGAAGGTCAGAGAGGAAGCTGCATCCAAGGGCCATGTTATCTATGAAGGCAAAAGTGGACAT 3549
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3550 ATCTTATCATATGATAGTCTGATATGCCGAGCATTACCCAGGGGGAGCCCTCATTCTGACCTCAAAGAGAGGAC 3623
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3624 TGTGCTGTCTGGTTCCATAATGCAGGGCACACCAAGAGCCACAGCGGAAAGCTTTGAGGACGGCCTTAAATACC 3697
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3698 CCAAACAGATAAAAAGGGAGAGCCCTCCCATCCGAGCATTTGAAGGTGCCATTACCAAAGGAAAACCATACGAT 3771
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3772 GGTATCACCACCATCAAAGAAATGGGGCGCTCCATCCATGAAATCCCACGGCAAGATATTCTAACTCAGGAAAG 3845
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3846 CCGGAAAACTCCAGAAGTGGTCCAGAGCACGAGGCCAATAATTGAGGGTTCCATTTCCCAGGGCACACCAATAA 3919
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3920 AATTTGACAACAACTCAGGTCAATCAGCTATCAAACACAATGTGAAGTCCTTAATCACAGGGCCTAGCAAACTA 3993
Query 307 -------------------------------------------------------------------------- 306
Sbjct 3994 CCCCGTGGAATGCTGGAAATTGTACCAGAGAACATAAAAGTAGTAGAACGGGGAAAATATGAGGATGTGAAAGC 4067
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4068 AGGCGAGCCAGTGCGAGCCCGGCACACGTCAGTGGTGAGCTCTGGCCCCTCCGTTCTCAGGTCTACACTTCACG 4141
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4142 AAGCTCCCAAAGCACAGCTGAGCCCGGGACTCTATGATGACAGCAGCGCTCGCAGGACTCCTGTGAGCTACCAG 4215
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4216 AACACCATATCCAGAGGCTCCCCCATGATGAACAGAACTTCTGATGTTTCTTCCAGCAAGTCTGCCAGTCATGA 4289
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4290 AAGGAAATCAACTCTGACCCCAACCCAAAGAGAAAGTATACCAGCCAAGTCTCCAGTGCCCGGGGTGGATCCCG 4363
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4364 TCGTGAGTCACAGCCCATTTGATCCTCATCACAGGAGTAGCGCTGCAGGAGAGGTTTATCGGAGCCACCTACCC 4437
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4438 ACGCACTTGGATCCAGCTATGCCCTTTCACAGGGCTTTGGATCCTGCAGCTGCTGCTTACCTGTTACAGAGACA 4511
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4512 GCTTTCACCAACCCCAGGATACCCAAGTCAGTACCAGCTCTATGCAATGGAGAATACAAGGCAGACAATCCTCA 4585
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4586 ACGATTACATTACCTCACAGCAGATGCAGGTGAATCTGCGCCCTGATGTCACCAGGGGACTGTCCCCACGAGAG 4659
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4660 CAGCCACTGGGGCTCCCTTACCCAGCTACAAGAGGAATCATTGACCTGACCAATATGCCTCCAACAATCTTAGT 4733
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4734 GCCTCATGCAGGGGGAACGAGCACCCCTCCCATGGACAGGATCACGTATATTCCTGGTACACAGGTTACTTTCC 4807
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4808 CTCCCAGGCCATATAACGCTGCTTCTCTGTCTCCAGGACACCCAACACACCTTGCAGCAGCTGCAAGTGCTGAG 4881
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4882 AGGGAACGAGAGCGGGAAAGGGAGAAGGAGCGCGAACGTGAGCGCGAGCGTGAGCGTGAACGTGAACGCGAAAG 4955
Query 307 -------------------------------------------------------------------------- 306
Sbjct 4956 GATCGCTGCTGCTCCCGCTGACCTCTACCTACGACCAGGTTCAGAACAGCCAGGCCGTCCTGGCAGCCACGGAT 5029
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5030 ATGTTCGCTCCCCTTCCCCTTCAGTAAGAACTCAGGAGACCATCCTGCAACAGAGACCCAGTGTTTTCCAGGGC 5103
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5104 ACCAATGGAACCAGTGTAATCACACCTTTGGACCCAACTGCTCAGCTACGCATCATGCCACTGCCTTCTGGGGG 5177
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5178 CCCTTCCATAAGTCAAGGCCTGCCAGCCTCCCGTTACAACACTGCTGCGGATGCCCTGGCTGCTCTTGTGGATG 5251
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5252 CTGCAGCTTCTGCACCCCAGATGGATGTTTCCAAAACAAAAGAGATGTCTTCTCACAGGTATGAAACGGCTAGT 5325
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5326 GATGCCATTGAGGTGATAAGTCCCGCCAGCTCACCTGCACCACCCCAGGAAAAGCCACAGGCCTATCAGCCAGA 5399
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5400 CATGGTTAAGGCAAATCAAGCAGAAAATGAGTCCACTCGACAGTATGAAGGTCCACTGCATCATTATCGGTCCC 5473
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5474 AGCAGGAATCACCATCTCCACAGCAACAGCCACCACTGCCCCCATCTTCCCAGTCAGAGGGAATGGGACAGGTG 5547
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5548 CCCAGGACCCATCGACTGATCACACTTGCTGACCACATCTGTCAAATTATCACACAAGATTTTGCTAGAAATCA 5621
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5622 AGTTCCCTCGCAGCCTTCTACTTCTACATTCCAAACTTCACCATCTGCTTTGTCATCCACACCTGTAAGAACTA 5695
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5696 AAACCTCAAGCCGCTACAGCCCAGAATCACAGTCTCAGACTGTCTTGCATCCCAGACCAGGTCCTAGAGTCTCT 5769
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5770 CCAGAAAATCTTGTGGATAAATCCCGGGGAAGGCCTGGAAAATCTCCAGAGAGGAGTCATATCCCATCAGAGCC 5843
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5844 CTATGAGCCCATCTCCCCACCCCAAGGCCCTGCTGTGCATGAGAAGCAGGACAGCATGTTGCTCTTGTCACAGA 5917
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5918 GGGGAGTGGACCCTGCTGAGCAAAGGAGTGATTCTCGATCACCAGGAAGTATAAGCTACTTGCCTTCATTCTTC 5991
Query 307 -------------------------------------------------------------------------- 306
Sbjct 5992 ACCAAGCTTGAAAGCACATCACCCATGGTTAAATCAAAGAAACAGGAAATTTTTCGTAAGTTGAACTCTTCTGG 6065
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6066 TGGAGGTGACTCTGATATGGCAGCTGCTCAGCCAGGAACAGAGATCTTCAATCTGCCAGCAGTTACCACATCAG 6139
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6140 GTGCAGTGAGCTCAAGAAGCCATTCTTTTGCTGATCCCGCCAGTAACCTTGGTCTAGAAGACATCATCAGAAAG 6213
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6214 GCTCTCATGGGAAGTTTTGATGATAAAGTTGAAGATCATGGTGTTGTCATGTCCCATCCTGTGGGCATTATGCC 6287
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6288 TGGTAGTGCCAGCACCTCAGTGGTGACGAGCAGCGAGGCACGGAGAGATGAAGGGGAGCCATCACCTCATGCAG 6361
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6362 GAGTATGCAAACCAAAGCTGATCAACAAATCAAACAGCAGGAAGTCTAAATCTCCTATTCCTGGGCAAAGCTAT 6435
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6436 TTAGGAACTGAAAGGCCTTCTTCTGTCTCCTCTGTGCATTCAGAAGGTGATTACCACAGGCAGACACCAGGATG 6509
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6510 GGCATGGGAAGATCGGCCCTCTTCAACAGGTTCTACTCAGTTCCCTTACAACCCTCTGACCATACGGATGCTCA 6583
Query 307 -------------------------------------------------------------------------- 306
Sbjct 6584 GCAGTACACCACCTACACAGATCGCATGCGCCCCATCTGCCATCACCCAAGCAGCTCCACATCAACAGAACCGC 6657
Query 307 ------------------------------------------------------------------ 306
Sbjct 6658 ATCTGGGAGAGGGAGCCTGCCCCGCTCCTCTCAGCGCAGTATGAGACACTGTCTGATAGTGACGAC 6723
