Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10320
- Subject:
- NM_001034173.4
- Aligned Length:
- 2769
- Identities:
- 1464
- Gaps:
- 1305
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGCGGCGGGGCAGCCAGGCGCTCCGGCGCTTCTCCACTGGCCGGGTTTATTTCAAAAACAAGCTGAAGTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCACTAATTGGCCAGAGCCTCTTTGGACAAGAAGTCTATAGCCACCTCCGCAAAGAGGGCCACCGAGTAGTAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGTGTTCACAGTTCCAGACAAGGATGGAAAAGCTGACCCTCTGGCTTTGGCTGCAGAGAAAGATGGGACCCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTGTTCAAGCTTCCTAAATGGAGGGTCAAGGGCAAGACCATCAAAGAAGTGGCAGAAGCCTACAGATCCGTGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGCAGAGCTAAATGTGCTCCCTTTCTGCACTCAGTTCATTCCCATGGATATAATTGATAGTCCAAAGCACGGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTATCATTTATCACCCATCCATCCTGCCCAGGCACAGAGGAGCCTCTGCTATCAATTGGACTCTAATTATGGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GATAAGAAAGCTGGGTTTTCTGTTTTCTGGGCTGATGATGGCTTGGATACAGGACCCATCCTTCTTCAGAGATC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATGTGATGTTGAACCCAATGATACAGTGGATGCACTTTATAATCGGTTTCTTTTTCCTGAAGGAATCAAGGCCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGTAGAAGCTGTCCAACTCATAGCTGATGGAAAAGCTCCTCGTATACCCCAGCCAGAAGAAGGGGCAACATAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAAGGTATCCAGAAAAAGGAAAATGCTGAGATTTCTTGGGACCAGTCTGCCGAAGTTTTACATAACTGGATTCG 740
Query 1 ----------------------------------------------ATGGTCACTTTCTATGGCTCGACATTAC 28
||||||||||||||||||||||||||||
Sbjct 741 AGGTCATGATAAAGTCCCTGGAGCTTGGACAGAGATAAATGGACAGATGGTCACTTTCTATGGCTCGACATTAC 814
Query 29 TGAATAGCTCTGTGCCTCCTGGAGAACCACTGGAAATTAAAGGTGCCAAGAAGCCTGGTCTCGTTACCAAAAAT 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGAATAGCTCTGTGCCTCCTGGAGAACCACTGGAAATTAAAGGTGCCAAGAAGCCTGGTCTCGTTACCAAAAAT 888
Query 103 GGACTTGTTCTTTTTGGTAACGATGGAAAAGCACTGACGGTGAGAAATCTGCAGTTTGAAGATGGAAAAATGAT 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGACTTGTTCTTTTTGGTAACGATGGAAAAGCACTGACGGTGAGAAATCTGCAGTTTGAAGATGGAAAAATGAT 962
Query 177 CCCTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAGTGGTAGAACTGACAGCTGAAGAGGTGAAAGTGGCAG 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCCTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAGTGGTAGAACTGACAGCTGAAGAGGTGAAAGTGGCAG 1036
Query 251 AGACCATCAAGGTCATCTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGAAGACTCAACAGACTTCTTTAAA 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGACCATCAAGGTCATCTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGAAGACTCAACAGACTTCTTTAAA 1110
Query 325 TCTGGAGCAAGCTCAATGGATGTTGCCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTGGGCTTCAGTTGCA 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TCTGGAGCAAGCTCAATGGATGTTGCCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTGGGCTTCAGTTGCA 1184
Query 399 GAATGAAGATGTCTATATGGCCACCAAGTTTGAAGGCTTTATCCAAAAGGTCGTGAGGAAACTGAGAGGAGAAG 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GAATGAAGATGTCTATATGGCCACCAAGTTTGAAGGCTTTATCCAAAAGGTCGTGAGGAAACTGAGAGGAGAAG 1258
Query 473 ATCAAGAGGTGGAGCTGGTTGTAGATTATATTTCAAAGGAGGTCAATGAAATCATGGTAAAAATGCCATACCAG 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ATCAAGAGGTGGAGCTGGTTGTAGATTATATTTCAAAGGAGGTCAATGAAATCATGGTAAAAATGCCATACCAG 1332
Query 547 TGTTTCATAAATGGACAGTTCACAGATGCAGACGATGGAAAGACTTACGACACTATCAACCCAACAGATGGATC 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TGTTTCATAAATGGACAGTTCACAGATGCAGACGATGGAAAGACTTACGACACTATCAACCCAACAGATGGATC 1406
Query 621 TACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGATAAAGCAGTAGCAGCAGCAAAAGATGCTTTTG 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGATAAAGCAGTAGCAGCAGCAAAAGATGCTTTTG 1480
Query 695 AAAACGGTGAATGGGGAAGAATGAATGCAAGAGAAAGAGGAAGATTGATGTATAGACTTGCAGACCTACTGGAA 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AAAACGGTGAATGGGGAAGAATGAATGCAAGAGAAAGAGGAAGATTGATGTATAGACTTGCAGACCTACTGGAA 1554
Query 769 GAGAACCAAGAAGAGCTGGCAACTATTGAAGCCCTTGATTCAGGGGCTGTCTATACCTTGGCCCTGAAGACACA 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GAGAACCAAGAAGAGCTGGCAACTATTGAAGCCCTTGATTCAGGGGCTGTCTATACCTTGGCCCTGAAGACACA 1628
Query 843 CATTGGAATGTCTGTGCAAACATTCAGATATTTTGCTGGCTGGTGCGACAAAATTCAGGGTTCTACTATTCCAA 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CATTGGAATGTCTGTGCAAACATTCAGATATTTTGCTGGCTGGTGCGACAAAATTCAGGGTTCTACTATTCCAA 1702
Query 917 TCAACCAGGCCCGTCCAAATCGCAATCTGACCTTCACCAAGAAAGAGCCACTCGGTGTCTGTGCCATTATTATT 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TCAACCAGGCCCGTCCAAATCGCAATCTGACCTTCACCAAGAAAGAGCCACTCGGTGTCTGTGCCATTATTATT 1776
Query 991 CCCTGGAACTACCCGCTGATGATGCTGGCATGGAAGAGTGCTGCGTGTTTGGCAGCAGGCAATACCTTAGTGCT 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CCCTGGAACTACCCGCTGATGATGCTGGCATGGAAGAGTGCTGCGTGTTTGGCAGCAGGCAATACCTTAGTGCT 1850
Query 1065 CAAGCCAGCACAGGTCACGCCCTTGACTGCTTTGAAGTTTGCAGAACTGTCTGTGAAAGCAGGCTTTCCAAAGG 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CAAGCCAGCACAGGTCACGCCCTTGACTGCTTTGAAGTTTGCAGAACTGTCTGTGAAAGCAGGCTTTCCAAAGG 1924
Query 1139 GGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGGACAACGTCTGTCTGAACATCCTGACATCCGCAAA 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGGACAACGTCTGTCTGAACATCCTGACATCCGCAAA 1998
Query 1213 CTTGGTTTCACTGGATCCACTCCTATTGGCAAACAGATCATGAAGAGCTGTGCTGTTAGCAACTTGAAGAAAGT 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CTTGGTTTCACTGGATCCACTCCTATTGGCAAACAGATCATGAAGAGCTGTGCTGTTAGCAACTTGAAGAAAGT 2072
Query 1287 TTCCCTTGAGCTTGGTGGCAAGTCTCCACTTATAATATTTAATGACTGTGAACTTGACAAGGCTGTGCGAATGG 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TTCCCTTGAGCTTGGTGGCAAGTCTCCACTTATAATATTTAATGACTGTGAACTTGACAAGGCTGTGCGAATGG 2146
Query 1361 GCATGGGAGCAGTATTTTTCAACAAAGGAGAGAACTGTATTGCTGCTGGGCGGTTGTTCGTGGAAGAATCCATC 1434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GCATGGGAGCAGTATTTTTCAACAAAGGAGAGAACTGTATTGCTGCTGGGCGGTTGTTCGTGGAAGAATCCATC 2220
Query 1435 CACGACGAATTTGTGACAAGA-------------------------------GTGATCCAC------------- 1464
||||||||||||||||||||| |||||||||
Sbjct 2221 CACGACGAATTTGTGACAAGAGTGGTAGAAGAAATTAAAAAGATGAAAATTGGTGATCCACTTGACAGATCCAC 2294
Query 1465 -------------------------------------------------------------------------- 1464
Sbjct 2295 TGATCATGGGCCCCAAAATCATAAGGCTCATCTGGAAAAGCTGCTGCAATACTGTGAAACTGGAGTGAAAGAAG 2368
Query 1465 -------------------------------------------------------------------------- 1464
Sbjct 2369 GGGCCACTTTGGTGTACGGGGGAAGACAAGTCCAAAGGCCAGGCTTTTTCATGGAGCCGACCGTGTTCACAGAT 2442
Query 1465 -------------------------------------------------------------------------- 1464
Sbjct 2443 GTGGAAGACTACATGTACCTCGCCAAAGAGGAATCCTTTGGGCCTATTATGGTCATTTCTAAATTCCAAAATGG 2516
Query 1465 -------------------------------------------------------------------------- 1464
Sbjct 2517 GGACATCGATGGAGTGTTGCAGCGAGCAAATAGTACAGAGTATGGTTTGGCCTCAGGGGTTTTTACAAGAGACA 2590
Query 1465 -------------------------------------------------------------------------- 1464
Sbjct 2591 TAAACAAAGCTATGTATGTGAGTGAAAAACTGGAAGCAGGAACTGTTTTTATTAACACATACAACAAGACAGAT 2664
Query 1465 -------------------------------------------------------------------------- 1464
Sbjct 2665 GTGGCGGCCCCATTTGGCGGAGTTAAACAATCTGGCTTTGGAAAAGACTTAGGTGAGGAAGCTCTAAATGAATA 2738
Query 1465 ------------------------------- 1464
Sbjct 2739 TCTCAAAACCAAGACGGTGACACTGGAATAT 2769
