Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10320
- Subject:
- XM_011243403.2
- Aligned Length:
- 2355
- Identities:
- 1251
- Gaps:
- 891
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCTCCATCATCTACCACCCCTCACTCCTACCCAGGCACAGAGGAGCTTCTGCCATCAACTGATGATGGTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGATACAGGACCCATCCTTCTTCAGAGATCGTGTGACGTCAAGCCCAATGACACAGTGGACTCGCTTTATAACC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGTTCCTTTTTCCTGAGGGGATCAAGGCCATGGTAGAAGCCGTCCAACTCATAGCTGATGGAAAAGCGCCTCGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACTCCCCAGCCAGAAGAGGGGGCAACATATGAAGGCATCCAGAAGAAGGAGAACGCTGAGGTTTCTTGGGACCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCTGCTGAAGGTTTGCATAACTGGATTCGAGGTCATGACAAGGTCCCTGGAGCCTGGGCAGAGATCAATGGAC 370
Query 1 --ATGGTCACTTTCTATGGCTCGACATTACTGAATAGCTCTGTGCCTCCTGGAGAACCACTGGAAATTAAAGGT 72
|||||.||||||||.|||||..||.|..|||.|||.|||||||||.||||||||||||||||.||||.||||
Sbjct 371 AGATGGTGACTTTCTACGGCTCATCACTGTTGACTAGTTCTGTGCCTTCTGGAGAACCACTGGACATTAGAGGT 444
Query 73 GCCAAGAAGCCTGGTCTCGTTACCAAAAATGGACTTGTTCTTTTTGGTAACGATGGAAAAGCACTGACGGTGAG 146
|||||||||||.|||||.||.|||||||||||.|||||.||||||||.||.||||||||||||||||.||||||
Sbjct 445 GCCAAGAAGCCCGGTCTTGTCACCAAAAATGGCCTTGTCCTTTTTGGGAATGATGGAAAAGCACTGATGGTGAG 518
Query 147 AAATCTGCAGTTTGAAGATGGAAAAATGATCCCTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAGTGGTAG 220
|||.|||||||||||.||.|||||.|||||.||.|||||.|||||||||||..||||||||||.||||||||||
Sbjct 519 AAACCTGCAGTTTGAGGACGGAAAGATGATTCCAGCCTCCCAGTACTTTTCTGCGGGTGAGACATCAGTGGTAG 592
Query 221 AACTGACAGCTGAAGAGGTGAAAGTGGCAGAGACCATCAAGGTCATCTGGGCTGGAATTTTAAGCAATGTCCCC 294
||||.||.||.||.|||.||||.||||||||||||||.|||||||||||||||.|||||||||||||...|||.
Sbjct 593 AACTTACGGCCGAGGAGCTGAAGGTGGCAGAGACCATTAAGGTCATCTGGGCTCGAATTTTAAGCAACACCCCT 666
Query 295 ATTATTGAAGACTCAACAGACTTCTTTAAATCTGGAGCAAGCTCAATGGATGTTGCCAGGCTGGTTGAAGAGAT 368
.|.|||||.|||||.||.||||||||||||||||||||.||||||||||||||||..||||||||.||||||||
Sbjct 667 GTGATTGAGGACTCCACGGACTTCTTTAAATCTGGAGCGAGCTCAATGGATGTTGTGAGGCTGGTGGAAGAGAT 740
Query 369 CAGACAGAAATGTGGTGGGCTTCAGTTGCAGAATGAAGATGTCTATATGGCCACCAAGTTTGAAGGCTTTATCC 442
||||||||..||.||.|||||||||.|||||||||||||.|||||.||||||||||||||||.||..||.||||
Sbjct 741 CAGACAGAGTTGCGGAGGGCTTCAGCTGCAGAATGAAGACGTCTACATGGCCACCAAGTTTGGAGATTTCATCC 814
Query 443 AAAAGGTCGTGAGGAAACTGAGAGGAGAAGATCAAGAGGTGGAGCTGGTTGTAGATTATATTTCAAAGGAGGTC 516
|||||||.|||.|||.||||||||||||.||..||||||..|||.||||.||.|||||..||||.||||||||.
Sbjct 815 AAAAGGTTGTGCGGAGACTGAGAGGAGAGGACGAAGAGGCAGAGATGGTGGTGGATTACGTTTCCAAGGAGGTG 888
Query 517 AATGAAATCATGGTAAAAATGCCATACCAGTGTTTCATAAATGGACAGTTCACAGATGCAGACGATGGAAAGAC 590
||.|..||.|..||.|||||.||.||||||||||||||||||||||||||....|||||.||.||||||.||||
Sbjct 889 AACGGGATGACAGTGAAAATCCCCTACCAGTGTTTCATAAATGGACAGTTTGTGGATGCCGAGGATGGAGAGAC 962
Query 591 TTACGACACTATCAACCCAACAGATGGATCTACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGATA 664
|||||.||||.|||||||.|||||||||.||||||||||||.|||.||||||||||||||.|||||||||||.|
Sbjct 963 TTACGCCACTGTCAACCCCACAGATGGAACTACAATATGCAGAGTGTCCTACGCTTCTTTAGCGGATGTTGACA 1036
Query 665 AAGCAGTAGCAGCAGCAAAAGATGCTTTTGAAAACGGTGAATGGGGAAGAATGAATGCAAGAGAAAGAGGAAGA 738
.|||||||||.|||||.||.||.||.|||||.|||||.||||||||.||.|||||.||.|||||.|||||||||
Sbjct 1037 GAGCAGTAGCCGCAGCCAAGGACGCCTTTGAGAACGGCGAATGGGGGAGGATGAACGCCAGAGACAGAGGAAGA 1110
Query 739 TTGATGTATAGACTTGCAGACCTACTGGAAGAGAACCAAGAAGAGCTGGCAACTATTGAAGCCCTTGATTCAGG 812
.|.|||||.|||||.||.||||||.|||||||.|||||||||||||||||.||.||.|||||.||.|||||.||
Sbjct 1111 CTCATGTACAGACTCGCTGACCTAATGGAAGAAAACCAAGAAGAGCTGGCCACCATAGAAGCGCTGGATTCCGG 1184
Query 813 GGCTGTCTATACCTTGGCCCTGAAGACACACATTGGAATGTCTGTGCAAACATTCAGATATTTTGCTGGCTGGT 886
|||||||||.|||.||||.||||||||.||||||||||||||||||||.||.||||||||.||.||.|||||||
Sbjct 1185 GGCTGTCTACACCCTGGCTCTGAAGACTCACATTGGAATGTCTGTGCAGACGTTCAGATACTTCGCAGGCTGGT 1258
Query 887 GCGACAAAATTCAGGGTTCTACTATTCCAATCAACCAGGCCCGTCCAAATCGCAATCTGACCTTCACCAAGAAA 960
|.||||||||||||||||||||.||||||||||||||||||||.||.|||..|||.|||||||||||||||||.
Sbjct 1259 GTGACAAAATTCAGGGTTCTACAATTCCAATCAACCAGGCCCGGCCGAATTACAACCTGACCTTCACCAAGAAG 1332
Query 961 GAGCCACTCGGTGTCTGTGCCATTATTATTCCCTGGAACTACCCGCTGATGATGCTGGCATGGAAGAGTGCTGC 1034
||||||||.||||.||||||||||||.|||||.|||||||||||.||||||||||||||.||||||||.||.||
Sbjct 1333 GAGCCACTTGGTGCCTGTGCCATTATCATTCCTTGGAACTACCCACTGATGATGCTGGCCTGGAAGAGCGCAGC 1406
Query 1035 GTGTTTGGCAGCAGGCAATACCTTAGTGCTCAAGCCAGCACAGGTCACGCCCTTGACTGCTTTGAAGTTTGCAG 1108
|||..||||.||||||||.|||.|.|||||||||||.|||||||||||.||||||||.|||.||||||||||||
Sbjct 1407 GTGCCTGGCGGCAGGCAACACCCTGGTGCTCAAGCCTGCACAGGTCACACCCTTGACGGCTCTGAAGTTTGCAG 1480
Query 1109 AACTGTCTGTGAAAGCAGGCTTTCCAAAGGGGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGGACAA 1182
|.|||.|.||||||||.||||||||.||||||||.||.||||||||||||||||||||.||..|.||||||||.
Sbjct 1481 AGCTGACCGTGAAAGCTGGCTTTCCCAAGGGGGTGATTAACATCATTCCAGGCTCAGGGGGTGTCGCAGGACAG 1554
Query 1183 CGTCTGTCTGAACATCCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAAACAGATCATGAA 1256
.|.||.|||.|.||.||||||||||||||.|||||.||||||||||||||..|..|.|||||||||||||||||
Sbjct 1555 AGGCTCTCTCAGCACCCTGACATCCGCAAGCTTGGCTTCACTGGATCCACCTCAGTGGGCAAACAGATCATGAA 1628
Query 1257 GAGCTGTGCTGTTAGCAACTTGAAGAAAGTTTCCCTTGAGCTTGGTGGCAAGTCTCCACTTATAATATTTAATG 1330
.|||||||||||.||||||.|||||||||||||||||||||||||||||||.||.|||||.||||||||.|.||
Sbjct 1629 AAGCTGTGCTGTGAGCAACCTGAAGAAAGTTTCCCTTGAGCTTGGTGGCAAATCCCCACTGATAATATTCAGTG 1702
Query 1331 ACTGTGAACTTGACAAGGCTGTGCGAATGGGCATGGGAGCAGTATTTTTCAACAAAGGAGAGAACTGTATTGCT 1404
|.|||||.|||||.||||||||.||.|||||||||||.|||||.||||||||.||||||||||||||.|||||.
Sbjct 1703 ATTGTGACCTTGAAAAGGCTGTACGGATGGGCATGGGCGCAGTGTTTTTCAATAAAGGAGAGAACTGCATTGCA 1776
Query 1405 GCTGGGCGGTTGTTCGTGGAAGAATCCATCCACGACGAATTTGTGACAAGAGT--------------------- 1457
|||||||||.||||.||||||||..||||||||||||||||.||.||.|||||
Sbjct 1777 GCTGGGCGGCTGTTTGTGGAAGAGGCCATCCACGACGAATTCGTAACCAGAGTGGTGGAAGAGATTAAAAAGAT 1850
Query 1458 ----------GATCCAC--------------------------------------------------------- 1464
|||||.|
Sbjct 1851 GAAAATTGGAGATCCCCTGGACAGATCTACGGACCATGGGCCCCAGAACCACAGAGCGCACTTGGAAAAGCTGC 1924
Query 1465 -------------------------------------------------------------------------- 1464
Sbjct 1925 TGCAGTACTGTGAGACTGGGGTGCAGGAGGGGGCCACACTGGTGTATGGAGGAAGACAGGTGCAGAGGCCAGGC 1998
Query 1465 -------------------------------------------------------------------------- 1464
Sbjct 1999 TTCTTCATGGAACCCACTGTGTTCACAGGCGTGGAAGATCACATGTACCTTGCCAAGGAGGAATCCTTTGGGCC 2072
Query 1465 -------------------------------------------------------------------------- 1464
Sbjct 2073 TATCATGGTCATTTCTAAATTCCAAAATGGGGACATCGATGGGGTGTTGCAGAGAGCAAATAACACTGAATATG 2146
Query 1465 -------------------------------------------------------------------------- 1464
Sbjct 2147 GCTTGGCCTCAGGGGTCTTCACAAGAGACATCAACAAAGCCATGTATGTGAGTGACAAGCTAGAGGCGGGAACG 2220
Query 1465 -------------------------------------------------------------------------- 1464
Sbjct 2221 GTTTTCATTAACACCTACAACAAGACAGACGTGGCAGCCCCATTTGGTGGAATGAAGCAATCTGGCTTTGGAAA 2294
Query 1465 ------------------------------------------------------------- 1464
Sbjct 2295 AGACTTAGGTGAGGAGGCCCTGAATGAATACCTGAAAATCAAAACAGTGACACTCGAGTAT 2355
