Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10320
- Subject:
- XM_011537989.3
- Aligned Length:
- 2252
- Identities:
- 759
- Gaps:
- 1492
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGCGGCGGGGCAGCCAGGCGCTCCGGCGCTTCTCCACTGGCCGGGTTTATTTCAAAAACAAGCTGAAGTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCACTAATTGGCCAGAGCCTCTTTGGACAAGAAGTCTATAGCCACCTCCGCAAAGAGGGCCACCGAGTAGTAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGTGTTCACAGTTCCAGACAAGGATGGAAAAGCTGACCCTCTGGCTTTGGCTGCAGAGAAAGATGGGACCCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTGTTCAAGCTTCCTAAATGGAGGGTCAAGGGCAAGACCATCAAAGAAGTGGCAGAAGCCTACAGATCCGTGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGCAGAGCTAAATGTGCTCCCTTTCTGCACTCAGTTCATTCCCATGGATATAATTGATAGTCCAAAGCACGGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTATCATTTATCACCCATCCATCCTGCCCAGGCACAGAGGAGCCTCTGCTATCAATTGGACTCTAATTATGGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GATAAGAAAGCTGGGTTTTCTGTTTTCTGGGCTGATGATGGCTTGGATACAGGACCCATCCTTCTTCAGAGATC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATGTGATGTTGAACCCAATGATACAGTGGATGCACTTTATAATCGGTTTCTTTTTCCTGAAGGAATCAAGGCCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGTAGAAGCTGTCCAACTCATAGCTGATGGAAAAGCTCCTCGTATACCCCAGCCAGAAGAAGGGGCAACATAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAAGGTATCCAGAAAAAGGAAAATGCTGAGATTTCTTGGGACCAGTCTGCCGAAGTTTTACATAACTGGATTCG 740
Query 1 ----------------------------------------------ATGGTCACTTTCTATGGCTCGACATTAC 28
||||||||||||||||||||||||||||
Sbjct 741 AGGTCATGATAAAGTCCCTGGAGCTTGGACAGAGATAAATGGACAGATGGTCACTTTCTATGGCTCGACATTAC 814
Query 29 TGAATAGCTCTGTGCCTCCTGGAGAACCACTGGAAATTAAAGGTGCCAAGAAGCCTGGTCTCGTTACCAAAAAT 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGAATAGCTCTGTGCCTCCTGGAGAACCACTGGAAATTAAAGGTGCCAAGAAGCCTGGTCTCGTTACCAAAAAT 888
Query 103 GGACTTGTTCTTTTTGGTAACGATGGAAAAGCACTGACGGTGAGAAATCTGCAGTTTGAAGATGGAAAAATGAT 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GGACTTGTTCTTTTTGGTAACGATGGAAAAGCACTGACGGTGAGAAATCTGCAGTTTGAAGATGGAAAAATGAT 962
Query 177 CCCTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAGTGGTAGAACTGACAGCTGAAGAGGTGAAAGTGGCAG 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CCCTGCCTCTCAGTACTTTTCAACGGGTGAGACGTCAGTGGTAGAACTGACAGCTGAAGAGGTGAAAGTGGCAG 1036
Query 251 AGACCATCAAGGTCATCTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGAAGACTCAACAGACTTCTTTAAA 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGACCATCAAGGTCATCTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGAAGACTCAACAGACTTCTTTAAA 1110
Query 325 TCTGGAGCAAGCTCAATGGATGTTGCCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTGGGCTTCAGTTGCA 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TCTGGAGCAAGCTCAATGGATGTTGCCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTGGGCTTCAGTTGCA 1184
Query 399 GAATGAAGATGTCTATATGGCCACCAAGTTTGAAGGCTTTATCCAAAAGGTCGTGAGGAAACTGAGAGGAGAAG 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GAATGAAGATGTCTATATGGCCACCAAGTTTGAAGGCTTTATCCAAAAGGTCGTGAGGAAACTGAGAGGAGAAG 1258
Query 473 ATCAAGAGGTGGAGCTGGTTGTAGATTATATTTCAAAGGAGGTCAATGAAATCATGGTAAAAATGCCATACCAG 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ATCAAGAGGTGGAGCTGGTTGTAGATTATATTTCAAAGGAGGTCAATGAAATCATGGTAAAAATGCCATACCAG 1332
Query 547 TGTTTCATAAATGGACAGTTCACAGATGCAGACGATGGAAAGACTTACGACACTATCAACCCAACAGATGGATC 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TGTTTCATAAATGGACAGTTCACAGATGCAGACGATGGAAAGACTTACGACACTATCAACCCAACAGATGGATC 1406
Query 621 TACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGATAAAGCAGTAGCAGCAGCAAAAGATGCTTTTG 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGATAAAGCAGTAGCAGCAGCAAAAGATGCTTTTG 1480
Query 695 AAAACGGTGAATGGGGAAGAATGAATGCAAGAGAAAGAGGAAGATTGATGTATAGACTTGCAGACCTACTGGAA 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |.|| |
Sbjct 1481 AAAACGGTGAATGGGGAAGAATGAATGCAAGAGAAAGAGGAAGATTGATGTATAG-CATG-------------A 1540
Query 769 GA--GAACCAAGAAGAGCTGGCAACTATTGAAGCCCTTGATTCAGGGGCTGTCTATACCTTGGCCCTGAAGACA 840
|| ||||
Sbjct 1541 GAATGAAC------------------------------------------------------------------ 1548
Query 841 CACATTGGAATGTCTGTGCAAACATTCAGATATTTTGCTGGCTGGTGCGACAAAATTCAGGGTTCTACTATTCC 914
Sbjct 1549 -------------------------------------------------------------------------- 1548
Query 915 AATCAACCAGGCCCGTCCAAATCGCAATCTGACCTTCACCAAGAAAGAGCCACTCGGTGTCTGTGCCATTATTA 988
Sbjct 1549 -------------------------------------------------------------------------- 1548
Query 989 TTCCCTGGAACTACCCGCTGATGATGCTGGCATGGAAGAGTGCTGCGTGTTTGGCAGCAGGCAATACCTTAGTG 1062
Sbjct 1549 -------------------------------------------------------------------------- 1548
Query 1063 CTCAAGCCAGCACAGGTCACGCCCTTGACTGCTTTGAAGTTTGCAGAACTGTCTGTGAAAGCAGGCTTTCCAAA 1136
Sbjct 1549 -------------------------------------------------------------------------- 1548
Query 1137 GGGGGTCATCAACATCATTCCAGGCTCAGGTGGCATAGCAGGACAACGTCTGTCTGAACATCCTGACATCCGCA 1210
Sbjct 1549 -------------------------------------------------------------------------- 1548
Query 1211 AACTTGGTTTCACTGGATCCACTCCTATTGGCAAACAGATCATGAAGAGCTGTGCTGTTAGCAACTTGAAGAAA 1284
Sbjct 1549 -------------------------------------------------------------------------- 1548
Query 1285 GTTTCCCTTGAGCTTGGTGGCAAGTCTCCACTTATAATATTTAATGACTGTGAACTTGACAAGGCTGTGCGAAT 1358
Sbjct 1549 -------------------------------------------------------------------------- 1548
Query 1359 GGGCATGGGAGCAGTATTTTTCAACAAAGGAGAGAACTGTATTGCTGCTGGGCGGTTGTTCGTGGAAGAATCCA 1432
Sbjct 1549 -------------------------------------------------------------------------- 1548
Query 1433 TCCACGACGAATTTGTGACAAGAGTGATCCAC 1464
Sbjct 1549 -------------------------------- 1548
