Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10320
- Subject:
- XR_001779502.1
- Aligned Length:
- 2585
- Identities:
- 1143
- Gaps:
- 1245
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGCGGGACCTGCCATTCGAGGGGGCGGGGCCGTGAGCAGAGCTGGACAGAGCTGAAGCGAAGCACTCAACCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTGCAGCCCTGGTACCTACCCACTCCCGCCGCCCGCCTGGCAATCGCTCGCTCCTCTACATCATGCTGTGGCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGTAGCCAGGCGCTACGGCACTTCTCCACCAGCCGGGTTTATTTCAAAAACAAGCTGAAGTTGGCACTTATTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCAGAGCCTGTTCGGACAGGAAGTCTATAGCCAGCTCCTGAAAGAGGGCCACCGAGTAGTGGGAGTGTTCACA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTGCCAGACAAGGATGGAAAGGCCGATCCACTGGCTTTGGCTGCAGAGAAAGATGGGACTCCCGTGTTCAAGTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCCTCGATGGAGACTCAAGGGTAAAACCATCAAGGAGGTAGCAGAAGCTTACCAGTCGGTGGGAGCCGAGCTCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACGTGCTCCCCTTCTGCACACAGTTCATCCCCATGGATGTCATTGACAGCCCAAAGCATGGCTCCATCATCTAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CACCCCTCACTCCTACCCAGGCACAGAGGAGCTTCTGCCATCAACTGGACACTAATCATGGGAGATAAGAAAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGGTTTTCTGTTTTCTGGGCAGATGATGGTTTGGATACAGGACCCATCCTTCTTCAGAGATCGTGTGACGTCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGCCCAATGACACAGTGGACTCGCTTTATAACCGGTTCCTTTTTCCTGAGGGGATCAAGGCCATGGTAGAAGCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTCCAACTCATAGCTGATGGAAAAGCGCCTCGCACTCCCCAGCCAGAAGAGGGGGCAACATATGAAGGCATCCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAAGAAGGAGAACGCTGAGGTTTCTTGGGACCAGCCTGCTGAAGGTTTGCATAACTGGATTCGAGGTCATGACA 888
Query 1 -----------------------------------ATGGTCACTTTCTATGGCTCGACATTACTGAATAGCTCT 39
|||||.||||||||.|||||..||.|..|||.|||.|||
Sbjct 889 AGGTCCCTGGAGCCTGGGCAGAGATCAATGGACAGATGGTGACTTTCTACGGCTCATCACTGTTGACTAGTTCT 962
Query 40 GTGCCTCCTGGAGAACCACTGGAAATTAAAGGTGCCAAGAAGCCTGGTCTCGTTACCAAAAATGGACTTGTTCT 113
||||||.||||||||||||||||.||||.|||||||||||||||.|||||.||.|||||||||||.|||||.||
Sbjct 963 GTGCCTTCTGGAGAACCACTGGACATTAGAGGTGCCAAGAAGCCCGGTCTTGTCACCAAAAATGGCCTTGTCCT 1036
Query 114 TTTTGGTAACGATGGAAAAGCACTGACGGTGAGAAATCTGCAGTTTGAAGATGGAAAAATGATCCCTGCCTCTC 187
||||||.||.||||||||||||||||.|||||||||.|||||||||||.||.|||||.|||||.||.|||||.|
Sbjct 1037 TTTTGGGAATGATGGAAAAGCACTGATGGTGAGAAACCTGCAGTTTGAGGACGGAAAGATGATTCCAGCCTCCC 1110
Query 188 AGTACTTTTCAACGGGTGAGACGTCAGTGGTAGAACTGACAGCTGAAGAGGTGAAAGTGGCAGAGACCATCAAG 261
||||||||||..||||||||||.||||||||||||||.||.||.||.|||.||||.||||||||||||||.|||
Sbjct 1111 AGTACTTTTCTGCGGGTGAGACATCAGTGGTAGAACTTACGGCCGAGGAGCTGAAGGTGGCAGAGACCATTAAG 1184
Query 262 GTCATCTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGAAGACTCAACAGACTTCTTTAAATCTGGAGCAAG 335
||||||||||||.|||||||||||||...|||..|.|||||.|||||.||.||||||||||||||||||||.||
Sbjct 1185 GTCATCTGGGCTCGAATTTTAAGCAACACCCCTGTGATTGAGGACTCCACGGACTTCTTTAAATCTGGAGCGAG 1258
Query 336 CTCAATGGATGTTGCCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTGGGCTTCAGTTGCAGAATGAAGATG 409
||||||||||||||..||||||||.||||||||||||||||..||.||.|||||||||.|||||||||||||.|
Sbjct 1259 CTCAATGGATGTTGTGAGGCTGGTGGAAGAGATCAGACAGAGTTGCGGAGGGCTTCAGCTGCAGAATGAAGACG 1332
Query 410 TCTATATGGCCACCAAGTTTGAAGGCTTTATCCAAAAGGTCGTGAGGAAACTGAGAGGAGAAGATCAAGAGGTG 483
||||.||||||||||||||||.||..||.|||||||||||.|||.|||.||||||||||||.||..||||||..
Sbjct 1333 TCTACATGGCCACCAAGTTTGGAGATTTCATCCAAAAGGTTGTGCGGAGACTGAGAGGAGAGGACGAAGAGGCA 1406
Query 484 GAGCTGGTTGTAGATTATATTTCAAAGGAGGTCAATGAAATCATGGTAAAAATGCCATACCAGTGTTTCATAAA 557
|||.||||.||.|||||..||||.||||||||.||.|..||.|..||.|||||.||.|||||||||||||||||
Sbjct 1407 GAGATGGTGGTGGATTACGTTTCCAAGGAGGTGAACGGGATGACAGTGAAAATCCCCTACCAGTGTTTCATAAA 1480
Query 558 TGGACAGTTCACAGATGCAGACGATGGAAAGACTTACGACACTATCAACCCAACAGATGGATCTACAATATGCA 631
|||||||||....|||||.||.||||||.|||||||||.||||.|||||||.|||||||||.||||||||||||
Sbjct 1481 TGGACAGTTTGTGGATGCCGAGGATGGAGAGACTTACGCCACTGTCAACCCCACAGATGGAACTACAATATGCA 1554
Query 632 AAGTATCCTACGCTTCTTTGGCGGATGTTGATAAAGCAGTAGCAGCAGCAAAAGATGCTTTTGAAAACGGTGAA 705
.|||.||||||||||||||.|||||||||||.|.|||||||||.|||||.||.||.||.|||||.|||||.|||
Sbjct 1555 GAGTGTCCTACGCTTCTTTAGCGGATGTTGACAGAGCAGTAGCCGCAGCCAAGGACGCCTTTGAGAACGGCGAA 1628
Query 706 TGGGGAAGAATGAATGCAAGAGAAAGAGGAAGATTGATGTATAGACTTGCAGACCTACTGGAAGAGAACCAAGA 779
|||||.||.|||||.||.|||||.|||||||||.|.|||||.|||||.||.||||||.|||||||.||||||||
Sbjct 1629 TGGGGGAGGATGAACGCCAGAGACAGAGGAAGACTCATGTACAGACTCGCTGACCTAATGGAAGAAAACCAAGA 1702
Query 780 AGAGCTGGCAACTATTGAAGCCCTTGATTCAGGGGCTGTCTATACCTTGGCCCTGAAGACACACATTGGAATGT 853
|||||||||.||.||.|||||.||.|||||.|||||||||||.|||.||||.||||||||.|||||||||||||
Sbjct 1703 AGAGCTGGCCACCATAGAAGCGCTGGATTCCGGGGCTGTCTACACCCTGGCTCTGAAGACTCACATTGGAATGT 1776
Query 854 CTGTGCAAACATTCAGATATTTTGCTGGCTGGTGCGACAAAATTCAGGGTTCTACTATTCCAATCAACCAGGCC 927
|||||||.||.||||||||.||.||.||||||||.||||||||||||||||||||.||||||||||||||||||
Sbjct 1777 CTGTGCAGACGTTCAGATACTTCGCAGGCTGGTGTGACAAAATTCAGGGTTCTACAATTCCAATCAACCAGGCC 1850
Query 928 CGTCCAAATCGCAATCTGACCTTCACCAAGAAAGAGCCACTCGGTGTCTGTGCCATTATTATTCCCTGGAACTA 1001
||.||.|||..|||.|||||||||||||||||.||||||||.||||.||||||||||||.|||||.||||||||
Sbjct 1851 CGGCCGAATTACAACCTGACCTTCACCAAGAAGGAGCCACTTGGTGCCTGTGCCATTATCATTCCTTGGAACTA 1924
Query 1002 CCCGCTGATGATGCTGGCATGGAAGAGTGCTGCGTGTTTGGCAGCAGGCAATACCTTAGTGCTCAAGCCAGCAC 1075
|||.||||||||||||||.||||||||.||.|||||..||||.||||||||.|||.|.|||||||||||.||||
Sbjct 1925 CCCACTGATGATGCTGGCCTGGAAGAGCGCAGCGTGCCTGGCGGCAGGCAACACCCTGGTGCTCAAGCCTGCAC 1998
Query 1076 AGGTCACGCCCTTGACTGCTTTGAAGTTTGCAGAACTGTCTGTGAAAGCAGGCTTTCCAAAGGGGGTCATCAAC 1149
|||||||.||||||||.|||.|||||||||||||.|||.|.||||||||.||||||||.||||||||.||.|||
Sbjct 1999 AGGTCACACCCTTGACGGCTCTGAAGTTTGCAGAGCTGACCGTGAAAGCTGGCTTTCCCAAGGGGGTGATTAAC 2072
Query 1150 ATCATTCCAGGCTCAGGTGGCATAGCAGGACAACGTCTGTCTGAACATCCTGACATCCGCAAACTTGGTTTCAC 1223
|||||||||||||||||.||..|.||||||||..|.||.|||.|.||.||||||||||||||.|||||.|||||
Sbjct 2073 ATCATTCCAGGCTCAGGGGGTGTCGCAGGACAGAGGCTCTCTCAGCACCCTGACATCCGCAAGCTTGGCTTCAC 2146
Query 1224 TGGATCCACTCCTATTGGCAAACAGATCATGAAGAG-------------------------------------- 1259
|||||||||..|..|.|||||||||||||||||.||
Sbjct 2147 TGGATCCACCTCAGTGGGCAAACAGATCATGAAAAGAAAACCTCTAAAATAACAAAAGGAGCCAAAAAGAACAT 2220
Query 1260 -------------------------------------------------------------------------- 1259
Sbjct 2221 GAACGTCGGCACCCTTACTGCCCAGCCTTAGCAGTGGACCGGCTCCTCTCCTGACTCCTTCCTCTGACCTTCCC 2294
Query 1260 -------------------------------------------------------------------------- 1259
Sbjct 2295 TTGCCTTCTTTGAGACATGGTTTTCCATTCTTCTGCCTCCACTTTCTGAATGCTGGAATTACATGCACTGCCAT 2368
Query 1260 ------------CTGTGCTGTTAGCAACTTGAAGAAAGTTTCCCTTGAGCTTGGTGGCAAGTCTCCACTTATAA 1321
|||||||||.||||||.|||||||||||||||||||||||||||||||.||.|||||.||||
Sbjct 2369 GTCCTCATAAGTCTGTGCTGTGAGCAACCTGAAGAAAGTTTCCCTTGAGCTTGGTGGCAAATCCCCACTGATAA 2442
Query 1322 TATTTAATGACTGTGAACTTGACAAGGCTGTGCGAATGGGCATGGGAGCAGTATTTTTCAACAAAGGAGAGAAC 1395
||||.|.|||.|||||.||
Sbjct 2443 TATTCAGTGATTGTGACCT------------------------------------------------------- 2461
Query 1396 TGTATTGCTGCTGGGCGGTTGTTCGTGGAAGAATCCATCCACGACGAATTTGTGACAAGAGTGATCCAC 1464
Sbjct 2462 --------------------------------------------------------------------- 2461
