Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_10332
• Subject: NM_001039547.3
• Aligned Length: 1603
• Identities: 872
• Gaps: 716

Alignment

Query    1  ATGTCGGGGCTGCTCACGGACCCGGAGCAGAGAGCGCAGGAGCCGCGGTACCCCGGCTTCGTGCTGGGGCTGGA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTCGGGGCTGCTCACGGACCCGGAGCAGAGAGCGCAGGAGCCGCGGTACCCCGGCTTCGTGCTGGGGCTGGA  74

Query   75  TGTGGGCAGTTCTGTGATCCGCTGCCACGTCTATGACCGGGCGGCGCGGGTCTGCGGCTCCAGCGTGCAGAAGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TGTGGGCAGTTCTGTGATCCGCTGCCACGTCTATGACCGGGCGGCGCGGGTCTGCGGCTCCAGCGTGCAGAAGG  148

Query  149  TAGAAAATCTTTATCCTCAAATTGGCTGGGTAGAAATTGATCCTGATGTTCTTTGGATTCAATTTGTTGCCGTA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TAGAAAATCTTTATCCTCAAATTGGCTGGGTAGAAATTGATCCTGATGTTCTTTGGATTCAATTTGTTGCCGTA  222

Query  223  ATAAAAGAAGCAGTCAAAGCTGCAGGAATACAGATGAATCAAATTGTTGGTCTTGGCATTTCAACACAGAGAGC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  ATAAAAGAAGCAGTCAAAGCTGCAGGAATACAGATGAATCAAATTGTTGGTCTTGGCATTTCAACACAGAGAGC  296

Query  297  AACTTTTATTACGTGGAACAAGAAAACAGGAAATCATTTTCACAACTTTATAAGTTGGCAAGACTTAAGAGCTG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AACTTTTATTACGTGGAACAAGAAAACAGGAAATCATTTTCACAACTTTATAAGTTGGCAAGACTTAAGAGCTG  370

Query  371  TTGAACTTGTAAAATCTTGGAATAATTCTCTTCTTATGAAGATATTTCACAGTTCTTGCCGAGTGCTTCACTTT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TTGAACTTGTAAAATCTTGGAATAATTCTCTTCTTATGAAGATATTTCACAGTTCTTGCCGAGTGCTTCACTTT  444

Query  445  TTCACTAGAAGTAAACGACTTTTTACAGCCAGTTTGTTCACTTTCACAACCCAGCAGACTTCTTTGAGATTGGT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TTCACTAGAAGTAAACGACTTTTTACAGCCAGTTTGTTCACTTTCACAACCCAGCAGACTTCTTTGAGATTGGT  518

Query  519  CTGGATTTTACAGAACTTGACTGAGGTGCAAAAGGCAGTTGAAGAAGAAAATTGCTGCTTTGGGACTATTGATA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CTGGATTTTACAGAACTTGACTGAGGTGCAAAAGGCAGTTGAAGAAGAAAATTGCTGCTTTGGGACTATTGATA  592

Query  593  CCTGGTTGTTATATAAGCTCACAAAAGGTTCTGTATATGCCACAGATTTTTCAAATGCTAGTACAACTGGACTT  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCTGGTTGTTATATAAGCTCACAAAAGGTTCTGTATATGCCACAGATTTTTCAAATGCTAGTACAACTGGACTT  666

Query  667  TTTGACCCATATAAGATGTGTTGGAGTGGGATGATTACCTCTCTAATTTCGATACCACTTTCTCTCCTACCTCC  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TTTGACCCATATAAGATGTGTTGGAGTGGGATGATTACCTCTCTAATTTCGATACCACTTTCTCTCCTACCTCC  740

Query  741  TGTGAGGGACACAAGCCACAATTTTGGATCAGTGGATGAAGAGATATTTGGTGTGCCTATACCAATAGTTGCCT  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGTGAGGGACACAAGCCACAATTTTGGATCAGTGGATGAAGAGATATTTGGTGTGCCTATACCAATAGTTGCCT  814

Query  815  TGTTAAAGGTCCCTGGATATGACCAGAATATCTGCTATATTTTTGGGA-----------------AGGGG----  867
            ||.|         ||   .|||||||.| |||.||.||.|||   |||                 |||.|    
Sbjct  815  TGGT---------TG---CTGACCAGCA-ATCAGCCATGTTT---GGAGAGTGCTGCTTCCAGACAGGTGATGT  872

Query  868  -------ACCAT------TGAGCCAGTATT--CTATCA----TGGAAGTA--CTTTA-----------------  903
                   |||||      ||.|.||.|.||  .|||.|    |||||.||  |||.|                 
Sbjct  873  GAAATTAACCATGGGAACTGGGACATTTTTGGATATTAACACTGGAAATAGCCTTCAACAGACTACTGGAGGCT  946

Query  904  --------------------------------------------------------------------------  903
                                                                                      
Sbjct  947  TTTATCCATTAATTGGGTGGAAGATTGGGCAAGAAGTCGTATGCTTAGCTGAAAGCAATGCAGGAGACACTGGT  1020

Query  904  --------------------------------------------------------------------------  903
                                                                                      
Sbjct 1021  ACTGCCATAAAATGGGCTCAGCAGTTAGACCTTTTCACAGATGCTGCTGAGACTGAAAAAATGGCCAAAAGTTT  1094

Query  904  --------------------------------------------------------------------------  903
                                                                                      
Sbjct 1095  GGAGGATTCTGAAGGAGTTTGTTTTGTTCCATCTTTTAGTGGATTACAGGCTCCATTAAATGACCCCTGGGCAT  1168

Query  904  --------------------------------------------------------------------------  903
                                                                                      
Sbjct 1169  GTGCCTCTTTTATGGGTTTGAAGCCTTCTACCAGTAAATACCATCTTGTACGAGCAATATTGGAGTCAATAGCT  1242

Query  904  --------------------------------------------------------------------------  903
                                                                                      
Sbjct 1243  TTCAGAAACAAACAGTTATATGAGATGATGAAGAAAGAGATTCATATTCCTGTAAGAAAAATCCGGGCAGATGG  1316

Query  904  --------------------------------------------------------------------------  903
                                                                                      
Sbjct 1317  AGGAGTTTGTAAGAATGGTTTTGTCATGCAGATGACTTCAGACCTGATTAATGAGAATATAGACAGACCTGCCG  1390

Query  904  --------------------------------------------------------------------------  903
                                                                                      
Sbjct 1391  ACATTGACATGTCATGCCTGGGTGCAGCTTCTCTAGCTGGCCTTGCTGTTGGGTTTTGGACTGACAAGGAGGAA  1464

Query  904  --------------------------------------------------------------------------  903
                                                                                      
Sbjct 1465  CTAAAGAAACTGAGACAAAGTGAAGTGGTTTTCAAGCCACAGAAGAAATGTCAAGAATATGAAATGAGTCTGGA  1538

Query  904  -------------------------------------------------  903
                                                             
Sbjct 1539  AAACTGGGCCAAAGCAGTGAAACGCTCCATGAATTGGTATAACAAGACA  1587