Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10376
- Subject:
- NM_001146262.3
- Aligned Length:
- 1726
- Identities:
- 436
- Gaps:
- 1262
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGATTGAAGGTGGAGAGAGAACCTGTGGAGTACATGAACTTATCTGTATTAGAAAAGTATCTCCAGAGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGTTGGATTTTTGTCAGCTGTTGGGGTGTTTATTATCTTGATGCTGCTCCTTTTTCTCTATATTAATAAGAAGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCTGTTTTGAAAATGTTGGCGGGTTTCCAGATCTTGGTTCAGAATACAGTACAAGGAAGAATTCACAAGATAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATTTATAATTCCTACATGGACAAAGATGAGCATGGTTCATCCTCTGAAAGTGAAGATGAAGCGCTGGGTAAATA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCATGAGGCCTTATCCAGAACACACAATTCCAGACTACCACTGGCAGATTCTAGACAAAGGAACTATGCTTGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAACAAGGCAGAAATACAGTCCTCTATCGGCAGAGTATGATGGATACAGTAGTGAAGCATCAATAGATGAAGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACTGCATTCAGAGAATGAGAAGAACACCCCCGCTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTCTCCCCATCTGTCATGTACACCCTCAGAAATTGGGGACAGTAAATGTGAATTTTCCCACTGCAGCAACAGTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAAGATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAAGTTTTCATAATAAAGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TATGAAGAAGATGTTCCAAGTGACAGCACTGCAGTCCTGAGCCCTGAAGATATGTCAGCTCAAGGATCATCTTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGATGTGACTTTTGACTATGACT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CACAAGAACAGAAGCTTCTGGTAACAGTGACAGCTGTCACAGACATCCCAACATATAACAGGACAGGTGGCAAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCATGGCAAGTACACCTTGTTCTTCTACCTATAAAGAAACAGAGAGCAAAAACCAGCATCCAGAGAGGACCATG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCCTGTCTTCACAGAAACATTTAAATTTAATCATGTTGAATCTGAGATGATTGGAAATTATGCAGTTCGGTTTA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GACTGTATGGTGTACATCGCATGAAAAAAGAAAAGATTGTGGGGGAAAAGATTTTTTATTTAACAAAATTGAAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTTCAAGGGAAAATGTCATTGCCTGTGATATTGGAACCTTCTTACAATCATTCTGGCTGTGACTCCCAAATGAG 1184
Query 1 ----------ATGTCTTGTAGTGAAAGTACATCCGCATGTCAGTCTCTCGAAGACGGGTCAGTTCCAGAAATTC 64
|||||.||||||||||||||||||.|||||||||||||.|||.|.||.||||||||||||||||
Sbjct 1185 CGTGTCAGAAATGTCGTGTAGTGAAAGTACATCCTCATGTCAGTCTCTTGAACATGGCTCAGTTCCAGAAATTC 1258
Query 65 TCATTAGCCTGCTTTATAATGCCACAAATGGGAGACTATCAGCAGAAGTGATAAAAGGCAGCCACTTAAAAAAT 138
|.|||.|||||||||||||||||||||.|||.|||||||||||||||||||||||||||||||||||.||||||
Sbjct 1259 TTATTGGCCTGCTTTATAATGCCACAACTGGAAGACTATCAGCAGAAGTGATAAAAGGCAGCCACTTCAAAAAT 1332
Query 139 TGGGCAGCAAACAGACCACCCA---------------------------------------------------- 160
|.||||||||||||||||||||
Sbjct 1333 TTGGCAGCAAACAGACCACCCAATGGACTGTTCTGTTGTCTAAAACACTTGATAGGTGGACAGGTTTATATAAT 1406
Query 161 -----ATACATATGTTAAGTTAACTCTACGGAAATCCACGGATCAAGAGATGTCCAAATGCAAGATATCCATCC 229
||||||||||||||||||||||||.|||.||||.||.|||||||||||||||||||||||.||||||||
Sbjct 1407 CCGAGATACATATGTTAAGTTAACTCTACTGAATTCCATGGGTCAAGAGATGTCCAAATGCAAGACATCCATCC 1480
Query 230 GCAGAGGGCGGCCAAATCCAGTATACAAGGAAACTTTTGT-TTTCAAAGTGACCCTATTTCAGCTTTCTCATGT 302
|||||||||.|||||||||||||||.|||||||||||||| |||| |||||.|||||||||||||||||.||||
Sbjct 1481 GCAGAGGGCAGCCAAATCCAGTATATAAGGAAACTTTTGTCTTTC-AAGTGGCCCTATTTCAGCTTTCTGATGT 1553
Query 303 GACACTCATGCTGTCTGTGTATAACAAAAGCAGCATGAGAAGAA---AGATGATAGGCTGGATTTATTTAGGTC 373
|||||||||.||||||||||||||||||.|||||||||.||||| ||||||||||||||||||.||||||||
Sbjct 1554 GACACTCATACTGTCTGTGTATAACAAACGCAGCATGAAAAGAAAAGAGATGATAGGCTGGATTTCTTTAGGTC 1627
Query 374 TCAACAGCTCTGG---AGAAGAACTCAATCACTGGACTGAAATGAAAGAGTCAAAAGGACGGCAAGTACGTAGA 444
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||.|||||||.|||||
Sbjct 1628 TCAACAGCTCTGGAGAAGAAGAACTCAATCACTGGACTGAAATGAAAGAGTCAAAAGGACAGCAAGTATGTAGA 1701
Query 445 TGGCAGGCGTTGCTAGAGTCACGA 468
|||||.|||||||||||||||
Sbjct 1702 TGGCATGCGTTGCTAGAGTCA--- 1722
