Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10376
- Subject:
- NM_001146264.3
- Aligned Length:
- 1804
- Identities:
- 436
- Gaps:
- 1340
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGAGCGCATCATGGCGATTGAAGGTGGAGAGAGAACCTGTGGAGTACATGAACTTATCTGTATTAGAAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GATAGGGTATTTCTCTGTGGCCAGGCTGGAGTACAGTGGCACCATCTTGGCTCACTGCAACTTCCGCCTCCTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTTCAAACGATTCTTCTGCCTCAGCATCCCAAGTAACTGGGACTACAGTATCTCCAGAGGCAGTTGGATTTTTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCAGCTGTTGGGGTGTTTATTATCTTGATGCTGCTCCTTTTTCTCTATATTAATAAGAAGTTCTGTTTTGAAAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGTTGGCGGGTTTCCAGATCTTGGTTCAGAATACAGTACAAGGAAGAATTCACAAGATAAAATTTATAATTCCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACATGGACAAAGATGAGCATGGTTCATCCTCTGAAAGTGAAGATGAAGCGCTGGGTAAATATCATGAGGCCTTA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCCAGAACACACAATTCCAGACTACCACTGGCAGATTCTAGACAAAGGAACTATGCTTGGGAAACAAGGCAGAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATACAGTCCTCTATCGGCAGAGTATGATGGATACAGTAGTGAAGCATCAATAGATGAAGGAAACTGCATTCAGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAATGAGAAGAACACCCCCGCTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCATGTACACCCTCAGAAATTGGGGACAGTAAATGTGAATTTTCCCACTGCAGCAACAGTCCAAGATGCTCATA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAAGTTTTCATAATAAAGGATATGAAGAAGATG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTCCAAGTGACAGCACTGCAGTCCTGAGCCCTGAAGATATGTCAGCTCAAGGATCATCTTCGCAGCTTCCTAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGATGTGACTTTTGACTATGACTCACAAGAACAGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCTTCTGGTAACAGTGACAGCTGTCACAGACATCCCAACATATAACAGGACAGGTGGCAACTCATGGCAAGTAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACCTTGTTCTTCTACCTATAAAGAAACAGAGAGCAAAAACCAGCATCCAGAGAGGACCATGCCCTGTCTTCACA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAAACATTTAAATTTAATCATGTTGAATCTGAGATGATTGGAAATTATGCAGTTCGGTTTAGACTGTATGGTGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACATCGCATGAAAAAAGAAAAGATTGTGGGGGAAAAGATTTTTTATTTAACAAAATTGAATCTTCAAGGGAAAA 1258
Query 1 -----------------------------------------------------------------------ATG 3
|||
Sbjct 1259 TGTCATTGCCTGTGATATTGGAACCTTCTTACAATCATTCTGGCTGTGACTCCCAAATGAGCGTGTCAGAAATG 1332
Query 4 TCTTGTAGTGAAAGTACATCCGCATGTCAGTCTCTCGAAGACGGGTCAGTTCCAGAAATTCTCATTAGCCTGCT 77
||.||||||||||||||||||.|||||||||||||.|||.|.||.|||||||||||||||||.|||.|||||||
Sbjct 1333 TCGTGTAGTGAAAGTACATCCTCATGTCAGTCTCTTGAACATGGCTCAGTTCCAGAAATTCTTATTGGCCTGCT 1406
Query 78 TTATAATGCCACAAATGGGAGACTATCAGCAGAAGTGATAAAAGGCAGCCACTTAAAAAATTGGGCAGCAAACA 151
||||||||||||||.|||.|||||||||||||||||||||||||||||||||||.|||||||.|||||||||||
Sbjct 1407 TTATAATGCCACAACTGGAAGACTATCAGCAGAAGTGATAAAAGGCAGCCACTTCAAAAATTTGGCAGCAAACA 1480
Query 152 GACCACCCAATACATATGTTAAGTTAACTCTACGGAAATCCACGGATCAAGAGATGTCCAAATGCAAGATATCC 225
|||||||||||||||||||||||||||||||||.|||.||||.||.|||||||||||||||||||||||.||||
Sbjct 1481 GACCACCCAATACATATGTTAAGTTAACTCTACTGAATTCCATGGGTCAAGAGATGTCCAAATGCAAGACATCC 1554
Query 226 ATCCGCAGAGGGCGGCCAAATCCAGTATACAAGGAAACTTTTGT-TTTCAAAGTGACCCTATTTCAGCTTTCTC 298
|||||||||||||.|||||||||||||||.|||||||||||||| |||| |||||.|||||||||||||||||.
Sbjct 1555 ATCCGCAGAGGGCAGCCAAATCCAGTATATAAGGAAACTTTTGTCTTTC-AAGTGGCCCTATTTCAGCTTTCTG 1627
Query 299 ATGTGACACTCATGCTGTCTGTGTATAACAAAAGCAGCATGAGAAGAA---AGATGATAGGCTGGATTTATTTA 369
|||||||||||||.||||||||||||||||||.|||||||||.||||| ||||||||||||||||||.||||
Sbjct 1628 ATGTGACACTCATACTGTCTGTGTATAACAAACGCAGCATGAAAAGAAAAGAGATGATAGGCTGGATTTCTTTA 1701
Query 370 GGTCTCAACAGCTCTGG---AGAAGAACTCAATCACTGGACTGAAATGAAAGAGTCAAAAGGACGGCAAGTACG 440
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||.|||||||.|
Sbjct 1702 GGTCTCAACAGCTCTGGAGAAGAAGAACTCAATCACTGGACTGAAATGAAAGAGTCAAAAGGACAGCAAGTATG 1775
Query 441 TAGATGGCAGGCGTTGCTAGAGTCACGA 468
|||||||||.|||||||||||||||
Sbjct 1776 TAGATGGCATGCGTTGCTAGAGTCA--- 1800
