Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10398
- Subject:
- NR_027154.1
- Aligned Length:
- 5010
- Identities:
- 468
- Gaps:
- 4533
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGATAGCGGCGGCGCGGCCAGCGGAGCCGGGAGGCGGGTTAGCAGTGGCCTTGTGAGCGTGAGGAGCTGCCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CACCGCCTGCTCCTCGTCGTCCTCGTCCTCCGCGGCCCCGGCGACGTGGGCCGCGCACGGCCCTGGAAGAGACG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCGCCTCCCCTTCATCCACCTCTCTCTCACCGCGCCGCTCCCGCCTCCTCGTCCTGTGCTGCGGGCTCAGGCGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AACCCGGAACGGTCGTCCTCTTCCCCCGCCCGCCGCCGCCTCCTCCTTCTCCTCCTTCTCGGCTTCCTCCTCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCCGGGCCGGAGCGGGGTGTTGGCGGCGGCCGGTTCGGGCGGCGACTCGCGCTTCTCTGGGCGGCGGCGCTTG 370
Query 1 -----------------------ATGAGCCGCAGAGCCCCGGGGTCTCGGCTGAGCAGCGG------------C 39
|||||||||||||||||||||||||||||||||.|||| |
Sbjct 371 GCCATGTCGTGTCGGGGAAGGTAATGAGCCGCAGAGCCCCGGGGTCTCGGCTGAGCGGCGGCGGCGGCACCAAC 444
Query 40 GGCACCAACTATTCGCGGAGCTGGAATGACTGGCAACCCAGAACTGATAGTGCATCAGCTGACCCAGGTAATTT 113
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 445 GGCACCAACTATTCGCGGAGCTGGAATGACTGGCAACCCAGAACTGATAGTGCATCAGCCGACCCAGGTAATTT 518
Query 114 AAAATATTCTTCATCCAGAGATAGAGGTGGTTCTTCCTCTTACGGACTGCAACCTTCAAATTCAGCTGTGGTGT 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAAATATTCTTCATCCAGAGATAGAGGTGGTTCTTCCTCTTACGGACTGCAACCTTCAAATTCAGCTGTGGTGT 592
Query 188 CTCGGCAAAGGCACGATGATACCAGAGTCCACGCTGACATACAGAATGACGAAAAGGGTGGCTACAGTGTCAAT 261
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct 593 CTCGGCAAAGGCACGATGATACCAGAGTCCACGCTGACATACAGAATGACGAAAAGGGTGGCTACGGTGTCAAT 666
Query 262 GGAGGATCTGGGGAAAATACTTATGGTCGGAAGTCGTTGGGGCAAGAGCTGAGGGTTAACAATGTGACCAGCCC 335
||.||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGGGGATCTGGGGAAAATACTTATGGTCGGAAGTCATTGGGGCAAGAGCTGAGGGTTAACAATGTGACCAGCCC 740
Query 336 TGAGTTCACCAGTGTTCAGCATGGCAGTCGTGCTTTAGCCACCAAAGACATGAGGAAATCACAGGAGAGATCGA 409
||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TGAGTTCACCAGTGTTCAGCATGGCAGTTGTGCTTTAGCCACCAAAGACATGAGGAAATCACAGGAGAGATCGA 814
Query 410 TGTCTTATTGTGATGAGTCTCGACTGTCAAATCTTCTTCGGAGGATCACCCGGGAAGACGACAGAGAC------ 477
|||||||||||||||||||||||||||||.||||||||||||||||||||||||||.|||||.|||||
Sbjct 815 TGTCTTATTGTGATGAGTCTCGACTGTCATATCTTCTTCGGAGGATCACCCGGGAAAACGACCGAGACCGAAGA 888
Query 478 -------------------------------------------------------------------------- 477
Sbjct 889 TTGGCTACTGTAAAGCAGTTGAAAGAATTTATTCAGCAACCAGAAAATAAGCTGGTACTAGTTAAACAATTGGA 962
Query 478 -------------------------------------------------------------------------- 477
Sbjct 963 TATCTTGGCTGCTGTACATGATGTGCTTAATGAAAGTAGCAAATTGCTTCAGGAGTTGAGACAGGAGGGAGCTT 1036
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1037 GCTGTCTCGGCCTTCTTTGTGCTTCTCTGAGCTATGAGGCTGAGAAGATCTTCAAGTGGATTTTTAGCAAATTT 1110
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1111 AGCTCATCTGCAAAAGATGAAGTTAAACTCCTCTACTTATGTGCCACCTACAAAGCACTAGAGACTGTAGGAGA 1184
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1185 AAAGAAAGCCTTTTCATCTGTAATGCAGCTTGTAATGACCAGCCTGCAGTCAATTCTTGAAAATGTGGATACAC 1258
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1259 CAGAATTGCTTTGCAAATGTGTTAAGTGCATTCTTTTGGTGGCTCGATGTTACCCTCATATTTTCAGCACTAAT 1332
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1333 TTTAGGGATACAGTTGGTATATTAGTTGGATGGCATAGAGATCATACTCAGAAACCTTCGCTCACGCAGCAGGT 1406
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1407 ATCTGGGTGGTTGCAGAGTTTGGAGCCATTTTGGGTAGCTGATCTTGCATTTTCTACGCCTCTACTTGGTCAGT 1480
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1481 TTCTAGAAGACATGGAAGCATATGCTGAGGACCTCAGCCATGTGGCCGCTGGGGAATCAGTGGATGAAGACGTC 1554
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1555 CCTCCTCCATCAGTGTCATTACCAAAGCTGGCTGCGCTTCTCCGGGTATTTAGTACTGTGGTGAGGAGCACTGG 1628
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1629 GGAAAGCCTCAGCCCAATTCGGGCCCTCCAATTACTGAGGCATACGTAACAGATGTTCTGTACAGAGTAATGAG 1702
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1703 ATGTGTGACGGCTGCAAACCAGGTGTTTTTTTCTGAGGCTGTGTTGACAGCTGCTAATGAGCGTGTTGGTGTTT 1776
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1777 TGCTCGGCAGCTTGGATCCTAGCATGACTATACATTGTGACATGGTCATTACATATGGATTAGACCAACTGGAG 1850
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1851 AATTGCCAGACTTGTGGTACCGATTATATCATCTCAGTCTTGAATTTACTCACGCTGATTGTTGAACAGATAAA 1924
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1925 TACGAAACTGCCATCATCATTTGTAGAAAAACTGTTTATACCATCATCTAAACTACTATTCTTGCGTTATCATA 1998
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1999 AAGAAAAAGAGGTTGTTGCTGTAGCCCGTGCTGTTTATCAAGCAGTGCTCAGCTTGAAGAATATTCCTGTTTTG 2072
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2073 GAGACTGCCTATAAGTTAATATTGGGAGAAATGACTTGTGCCCTAAACAACCTCCTGCACAGTCTGCAGCTTCC 2146
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2147 TGAGTCCTGTTCTGAAATAAAACATGAGGCTTTTAAGAATCATGTGTTCAATGTAGACAATGCAAAATTTGTAG 2220
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2221 TTAAATTTGACCTCAGTGCCCTGACTACAATTGGAAATGCCAAAAACTCACTAATAGGGATGTGGGCGCTATCT 2294
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2295 CCAACTGTCTTTGCACTTCTGAGTAAGAATCTGATGATTGTGCACAGTGACCTGGCTGTTCACTTCCCTGCCAT 2368
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2369 TCAGTATGCTGTGCTCTACACATTGTATCCTCATTGTACCAGGCATGATCACTTTATCTTTAGTAGCCTCAGTT 2442
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2443 CTTCCTCTCCTTCTTTGTTTGATGGAGCTGTGATTGGCACTGTAACTATGGCCACAAAGAAACATTTCTCAATT 2516
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2517 ATATTAAATCTTCTGGGAATGTTACTTAAGAAAGATAACCAGGACACGAGGAAACTGTTAATGACTTGGGCTTT 2590
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2591 GGAAGTAGCTGTTGTAATGAAGAAGTCCGAAACATATGCACCTTTATTCTGTCTTCCGTCTTTCCATAAATTTT 2664
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2665 GCAAAGGCCTTTTAGCCGACACTCTCGTTGAAGATGTGAATATCTGTCTGCAGGCATGCAGCAGTCTACATGCT 2738
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2739 CTATCCTCTTCCTTGCCAGATGATCTTTTACAGAGATGTGTTGATGTTTGCCGTGTCCAACTAGTGCACCGTGG 2812
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2813 AACTTGTATTCGACAAGCATTTGGAAAACTGTTGAAATCAATTCCTTTAGGTGTTTTCCTAAGCGATAACAATC 2886
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2887 ACACAGAAATTCAAGAAATTTCTTTAGCATTAAGAAGTCACATGAGTAAAGCACCAAGTAATACATTCCACCCC 2960
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2961 CAAGATTTCTCTGATGTTATTAGTTTTATTTTGTATGGGAACTCTCATAGAACAGGGAAGGACAATTGGTTGGA 3034
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3035 AAGACTGTTCTATAGCTGCCAGAGACTGGATAAGCGTGACCAGTCAACAATTCCACGCAATCTCCTGAAGACAG 3108
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3109 ATGCTATCCTTTGGCAGTGGGCCATATGGGAAGCTGCACAATTCACTGTTCTTTCTAAGCTGAGAACCCCACTG 3182
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3183 GGCAGAGCTCAAGACACCTTCCAGACAATTGAAGGTATCATTCGAAGTCTCGCAGGTCACACATTAAACCCTGA 3256
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3257 TCAGGATGTTAGTCAGTGGACAACTGCAGACAGTGATGAAGGCCATGGTAACAACCAACTTAGACTTGTTCTTC 3330
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3331 TTCTGCAGTATCTGGAAAATCTGGAGAAATTAATGTATAATGCATACGAGGGATGTGCTAATGCCTTAACTTCA 3404
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3405 CCTCCCAAGGTCATTAGAACTTTTTTGTATACCAATCGCCAAACTTGTCAGGACTGGCTAACGCGGATTCGACT 3478
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3479 CTCCATCATGAGGGTAGGATTGTTGGCAGGCCAGCCTGCAGTGACAGTGAGACATGGCTTTGACTTGCTTACAG 3552
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3553 AGATGAAAACAACCAGCCTATCTCAGGGGAATGAATTGGAAGTAAGCATTATGATGGTGGTAGAAGCACTATGT 3626
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3627 GAACTTCATTGTCCTGAAGCTATACAGGGAATTGCTGTCTGGTCATCATCTATTGTTGGAAAACATCTTCTGTG 3700
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3701 GATTAACTCAGTGGCTCAACAGGCTGAAGGGAGGTTTGAAAAGGCCTCTGTGGAGTACCAGGAACACCTGTGTG 3774
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3775 CCATGACAGGTGTTGATTGCTGCATCTCCAGCTTTGACAAATCGGTGCTCACCTTAGCCAGTGCTGGGTGTAAG 3848
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3849 AGTGCCAGCCTGAAACATTGTCTGAATGGTGAATCCAGAAAAAGTGTGCTGTCCAAACCGACTGACTCTTCCCC 3922
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3923 TGAGGTTATAAATTATTTAGGAAACAAAGCATGTGAGTGCTACATCTCAACTGCCGATTGGGCTGCTGTGCAGG 3996
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3997 AATGGCAGAACGCTATCCATGACTTGAAAAAGAGTACCAGTAGCACTTCCCTCAACCTGAAAGCTGACTTCAAC 4070
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4071 TATATAAAATCATTAAGCAGCTTTGAGTCTGGAAAATTTGTCGAATGTACCGAGCAATTAGAATTGTTACCAGG 4144
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4145 AGAAAATATCAATCTACTTGCTGGAGGATCAAAAGAAAAAATAGACATGAAAAAACTGCTTCGTAACATGTGAA 4218
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4219 GTCCAGATCCAAGGGAACCTCAGAAATCCATTGAAGTTCCATTGTTAAGAAGTTCTGTTTGTTTGGCAACTGCT 4292
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4293 TTAAACCCGATAGAACAAGATCAGAAGTGGCAGTCTATAACTGAAAATGTGGTAAAGTACTTGAAGCAAACATC 4366
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4367 CCGCATCGCTATTGGACCTCTGAGACTTTCTACTTTAACAGTTTCACAGTCTTTGCCAGTTCTAAGTACCTTGC 4440
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4441 AGCTGTATTGCTCGTCTGCTTTGGAGACCACAGTTTCTAACAGACTTTCAACAGAGGACTGTCTTATTCCACTC 4514
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4515 TTCGGCGAAGCTTTACGTTCATGTAAACAGCATGACGTGAGGCCGTGGATGCAGGCATTAAGGTATACTGTGTA 4588
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4589 CCAGAATCAGTTGTTGGAGAAAATTAAAGTTAAGTGGTTTTCCTTTTTTTTTTTTTGTAAGAGAAAATTAAAGG 4662
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4663 TGGTTTTTTTTTTTAAATTTTGCTTTATTGAGGTTTATATTACACATTCTAAGTGTATGGTTTGATGAGTTCTA 4736
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4737 ACATGTCTTCACTTGTGTGACCACCAATACGATCGAGATAGAGAACAGCGTCTTACCCCAGAAGGTTCCCTTGG 4810
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4811 GATCATCTCCTCATTTGCCCCTGTCAGCAGTTACTGATTTGCTTTCTGTCACTATGGATTAGACTTGTCTTTAC 4884
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4885 TAAAGTTTCATGTACGTGAAATCATAACAACATGTTCTCTTGTGTTTGGCTTCTCTTGCTCAGCATGATATTTT 4958
Query 478 ---------------------------------------------------- 477
Sbjct 4959 TACGGTTCACCCATATTGCATGTATCAGGAATATAATCCTTTTTATTATTGA 5010
