Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10398
Subject:
NR_027155.2
Aligned Length:
5052
Identities:
467
Gaps:
4575

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGCGACAGCGGCGGCGCGGCGAGCGGAGCCGGGAGGCGGGGAAGCAGTGGCCGTGTGAGCGTGAGGAGCTGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCCACCGCCTGTTCCTCGTCGTCCTCCTCCTCGGGGGCCCCGGCGACGTGGGCCGCGCAGGGCCCTGGAAGAGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGTCGCCTCCCCTTCATCCGCCTCTCTCTCACCGCGCCGCTCCCGCCTCCTCGTCCTGTGCTGCGGGCTCAGGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGAACCCGAAACGGTCGTCCTCTTCCCCCGCCCGCCGCCGCCTCCTCCTCCTCCTCCTTCTCGGCTTCCTTCTC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGCCCCGGGCCGGAGCGGGGTGTTGGCGGCGGCCGGTTCGGGTGGCGACTCGCGCTTCTCTGGGCGGCGGCGCT  370

Query    1  -------------------------ATGAGCCGCAGAGCCCCGGGGTCTCGGCTGAGCAGCGG-----------  38
                                     |||||||||||||||||||||||||||||||||.||||           
Sbjct  371  TGGCCATATCGTGTCGGGGAAGGTAATGAGCCGCAGAGCCCCGGGGTCTCGGCTGAGCGGCGGCGGCGGCGGCG  444

Query   39  -------------------CGGCACCAACTATTCGCGGAGCTGGAATGACTGGCAACCCAGAACTGATAGTGCA  93
                               |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GCGGCGGCGGCGGCACCAACGGCACCAACTATTCGCGGAGCTGGAATGACTGGCAACCCAGAACTGATAGTGCA  518

Query   94  TCAGCTGACCCAGGTAATTTAAAATATTCTTCATCCAGAGATAGAGGTGGTTCTTCCTCTTACGGACTGCAACC  167
            |||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TCAGCCGACCCAGGTAATTTAAAATATTCTTCATCCAGAGATAGAGGTGGTTCTTCCTCTTACGGACTGCAACC  592

Query  168  TTCAAATTCAGCTGTGGTGTCTCGGCAAAGGCACGATGATACCAGAGTCCACGCTGACATACAGAATGACGAAA  241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TTCAAATTCAGCTGTGGTGTCTCGGCAAAGGCACGATGATACCAGAGTCCACGCTGACATACAGAATGACGAAA  666

Query  242  AGGGTGGCTACAGTGTCAATGGAGGATCTGGGGAAAATACTTATGGTCGGAAGTCGTTGGGGCAAGAGCTGAGG  315
            |||||||||||.||||||||||.||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  667  AGGGTGGCTACGGTGTCAATGGGGGATCTGGGGAAAATACTTATGGTCGGAAGTCATTGGGGCAAGAGCTGAGG  740

Query  316  GTTAACAATGTGACCAGCCCTGAGTTCACCAGTGTTCAGCATGGCAGTCGTGCTTTAGCCACCAAAGACATGAG  389
            ||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct  741  GTTAACAATGTGACCAGCCCTGAGTTCACCAGTGTTCAGCATGGCAGTTGTGCTTTAGCCACCAAAGACATGAG  814

Query  390  GAAATCACAGGAGAGATCGATGTCTTATTGTGATGAGTCTCGACTGTCAAATCTTCTTCGGAGGATCACCCGGG  463
            ||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  815  GAAATCACAGGAGAGATCAATGTCTTATTGTGATGAGTCTCGACTGTCAAATCTTCTTCAGAGGATCACCCGGG  888

Query  464  AAGACGACAGAGAC------------------------------------------------------------  477
            ||.|||||.|||||                                                            
Sbjct  889  AAAACGACCGAGACCGAAGATTGGCTACTGTAAAGCAGTTGAAAGAATTTATTCAGCAACCAGAAAATAAGCTG  962

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct  963  GTACTAGTTAAACAATTGGATATCTTGGCTGCTGTACATGATGTGCTTAATGAAAGTAGCAAATTGCTTCAGGA  1036

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1037  GTTGAGACAGGAGGGAGCTTGCTGTCTCGGCCTTCTTTGTGCTTCTCTGAGCTATGAGGCTGAGAAGATCTTCA  1110

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1111  AGTGGATTTTTAGCAAATTTAGCTCATCTGCAAAAGATGAAGTTAAACTCCTCTACTTATGTGCCACCTACAAA  1184

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1185  GCACTAGAGACTGTAGGAGAAAAGAAAGCCTTTTCATCTGTAATGCAGCTTGTAATGACCAGCCTGCAGTCAAT  1258

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1259  TCTTGAAAATGTGGATACACCAGAATTGCTTTGCAAATGTGTTAAGTGCATTCTTTTGGTGGCTCGATGTTACC  1332

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1333  CTCATATTTTCAGCACTAATTTTAGGGATACAGTTGGTATATTAGTTGGATGGCATAGAGATCATACTCAGAAA  1406

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1407  CCTTCGCTCACGCAGCAGGTATCTGGGTGGTTGCAGAGTTTGGAGCCATTTTGGGTAGCTGATCTTGCATTTTC  1480

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1481  TACGCCTCTACTTGGTCAGTTTCTAGAAGACATGGAAGCATATGCTGAGGACCTCAGCCATGTGGCCTCTGGGG  1554

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1555  AATCAGTGGATGAAGACGTCCCTCCTCCATCAGTGTCATTACCAAAGCTGGCTGCGCTTCTCCGGGTATTTAGT  1628

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1629  ACTGTGGTGAGGAGCACTGGGGAAAGCCTCAGCCCAATTCGGGCCCTCCAATTACTGAGGCATACGTAACAGAT  1702

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1703  GTTCTGTACAGAGTAATGAGATGTGTGACGGCTGCAAACCAGGTGTTTTTTTCTGAGGCTGTGTTGACAGCTGC  1776

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1777  TAATGAGCGTGTTGGTGTTTTGCTCGGCAGCTTGGATCCTAGCATGACTATACATTGTGACATGGTCATTACAT  1850

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1851  ATGGATTAGACCAACTGGAGAATTGCCAGACTTGTGGTACCGATTATATCATCTCAGTCTTGAATTTACTCACG  1924

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1925  CTGATTGTTGAACAGATAAATACGAAACTGCCATCATCATTTGTAGAAAAACTGTTTATACCATCATCTAAACT  1998

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1999  ACTATTCTTGCGTTATCATAAAGAAAAAGAGGTTGTTGCTGTAGCCCGTGCTGTTTATCAAGCAGTGCTCAGCT  2072

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2073  TGAAGAATATTCCTGTTTTGGAGACTGCCTATAAGTTAATATTGGGAGAAATGACTTGTGCCCTAAACAACCTC  2146

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2147  CTGCACAGTCTGCAGCTTCCTGAGTCCTGTTCTGAAATAAAACATGAGGCTTTTAAGAATCATGTGTTCAATGT  2220

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2221  AGACAATGCAAAATTTGTAGTTAAATTTGACCTCAATTGACTACAAAATTTGTAGTTAAATTTGACTACAATTG  2294

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2295  GAAATGCCAAAAACTCACTAATAGGGATGTGGGCGCTATCTCCAACTGTCTTTGCACTTCTGAGTAAGAATCTG  2368

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2369  ATGATTGTGCACAGTGACCTGGCTGTTCACTTCCCTGCCATTCAGTATGCTGTGCTCTACACATTGTATCCTCA  2442

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2443  TTGTACCAGGCATGATCACTTTATCTTTAGTAGCCTCAGTTCTTCCTCTCCTTCTTTGTTTGATGGAGCTGTGA  2516

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2517  TTGGCACTGTAACTATGGCCACAAAGAAACATTTCTCAATTATATTAAATCTTCTGGGAATGTTACTTAAGAAA  2590

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2591  GATAACCAGGACACGAGGAAACTGTTAATGACTTGGGCTTTGGAAGTAGCTGTTGTAATGAAGAAGTCCGAAAC  2664

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2665  ATATGCACCTTTATTCTGTCTTCCGTCTTTCCATAAATTTTGCAAAGGCCTTTTAGCCGACACTCTCGTTGAAG  2738

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2739  ATGTGAATATCTGTCTGCAGGCATGCAGCAGTCTACATGCTCTATCCTCTTCCTTGCCAGATGATCTTTTACAG  2812

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2813  AGATGTGTTGATGTTTGCCGTGTCCAACTAGTGCACCGTGGAACTTGTATTCGACAAGCATTTGGAAAACTGTT  2886

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2887  GAAATCAATTCCTTTAGGTGTTTTCCTAAGCGATAACAATCACACAGAAATTCAAGAAATTTCTTTAGCATTAA  2960

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2961  GAAGTCACATGAGTAAAGCACCAAGTAATACATTCCACCCCCAAGATTTCTCTGATGTTATTAGTTTTATTTTG  3034

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3035  TATGGGAACTCTCATAGAACAGGGAAGGACAATTGGTTGGAAAGACTGTTCTATAGCTGCCAGAGACTGGATAA  3108

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3109  GCGTGACCAGTCAACAATTCCACGCAATCTCCTGAAGACAGATGCTATCCTTTGGCAGTGGGCCATATGGGAAG  3182

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3183  CTGCACAATTCACTGTTCTTTCTAAGCTGAGAACCCCACTGGGCAGAGCTCAAGACACCTTCCAGACAATTGAA  3256

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3257  GGTATCATTCGAAGTCTCGCAGGTCACACATTAAACCCTGATCAGGATGTTAGTCAGTGGACAACTGCAGACAG  3330

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3331  TGATGAAGGCCATGGTAACAACCAACTTAGACTTGTTCTTCTTCTGCAGTATCTGGAAAATCTGGAGAAATTAA  3404

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3405  TGTATAATGCATACGAGGGATGTGCTAATGCCTTAACTTCACCTCCCAAGGTCATTAGAACTTTTTTGTATACC  3478

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3479  AATCGCCAAACTTGTCAGGACTGGCTAACGCGGATTCGACTCTCCATCATGAGGGTAGGATTGTTGGCAGGCCA  3552

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3553  GCCTGCAGTGACAGTGAGACATGGCTTTGACTTGCTTACAGAGATGAAAACAACCAGCCTATCTCAGGGGAATG  3626

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3627  AATTGGAAGTAAGCATTATGATGGTGGTAGAAGCACTATGTGAACTTCATTGTCCTGAAGCTATACAGGGAATT  3700

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3701  GCTGTCTGGTCATCATCTATTGTTGGAAAACATCTTCTGTGGATTAACTCAGTGGCTCAACAGGCTGAAGGGAG  3774

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3775  GTTTGAAAAGGCCTCTGTGGAGTACCAGGAACACCTGTGTGCCATGACAGGTGTTGATTGCTGCATCTCCAGCT  3848

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3849  TTGACAAATCGGTGCTCACCTTAGCCAGTGCTGGGTGTAAGAGTGCCAGCCTGAAACATTGTCTGAATGGTGAA  3922

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3923  TCCAGAAAAAGTGTGCTGTCCAAACCGACTGACTCTTCCCCTGAGGTTATAAATTATTTAGGAAACAAAGCATG  3996

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3997  TGAGTGCTACATCTCAACTGCCGATTGGGCTGCTGTGCAGGAATGGCAGAACGCTATCCATGACTTGAAAAAGA  4070

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 4071  GTACCAGTAGCACTTCCCTCAACCTGAAAGCTGACTTCAACTATATAAAATCATTAAGCAGCTTTGAGTCTGGA  4144

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 4145  AAATTTGTCGAATGTACCGAGCAATTAGAATTGTTACCAGGAGAAAATATCAATCTACTTGCTGGAGGATCAAA  4218

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 4219  AGAAAAAATAGACATGAAAAAACTGCTTCGTAACATGTGAAGTCCAGATCCAAGGGAACCTCAGAAATCCATTG  4292

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 4293  AAGTTCCATTGTTAAGAAGTTCTGTTTGTTTGGCAACTGCTTTAAACCCGATAGAACAAGATCAGAAGTGGCAG  4366

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 4367  TCTATAACTGAAAATGTGGTAAAGTACTTGAAGCAAACATCCCGCATCGCTATTGGACCTCTGAGACTTTCTAC  4440

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 4441  TTTAACAGTTTCACAGTCTTTGCCAGTTCTAAGTACCTTGCAGCTGTATTGCTCGTCTGCTTTGGAGACCACAG  4514

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 4515  TTTCTAACAGACTTTCAACAGAGGACTGTCTTATTCCACTCTTCGGCGAAGCTTTACGTTCATGTAAACAGCAT  4588

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 4589  GACGTGAGGCCGTGGATGCAGGCATTAAGGTATACTGTGTACCAGAATCAGTTGTTGGAGAAAATTAAAGTTAA  4662

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 4663  GTGGTTTTCCTTTTTTTTTTTTTGTAAGAGAAAATTAAAGGTGGTTTTTTTTTTTTAAATTTTGCTTTATTGAG  4736

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 4737  GTTTATATTACACATTCTAAGTGTATGGTTTGATGAGTTCTAACATGTCTTCACTTGTGTGACCACCAATACGA  4810

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 4811  TCGAGATAGAGAACAGCGTCTTACCCCAGAAGGTTCCCTTGGGATCATCTCCTCATTTGCCCCTGTCAGCAGTT  4884

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 4885  ACTGATTTGCTTTCTGTCACTATGGATTAGACTTGTCTTTACTAAAGTTTCATGTACGTGAAATCATAACAACA  4958

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 4959  TGTTCTCTTGTGTTTGGCTTCTCTTGCTCAGCATGATATTTTTACGGTTCACCCATATTGCATGTATCAGGAAT  5032

Query  478  --------------------  477
                                
Sbjct 5033  ATAATCCTTTTTATTATTGA  5052

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