Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10398
- Subject:
- NR_027155.2
- Aligned Length:
- 5052
- Identities:
- 467
- Gaps:
- 4575
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTGCGACAGCGGCGGCGCGGCGAGCGGAGCCGGGAGGCGGGGAAGCAGTGGCCGTGTGAGCGTGAGGAGCTGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCACCGCCTGTTCCTCGTCGTCCTCCTCCTCGGGGGCCCCGGCGACGTGGGCCGCGCAGGGCCCTGGAAGAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGTCGCCTCCCCTTCATCCGCCTCTCTCTCACCGCGCCGCTCCCGCCTCCTCGTCCTGTGCTGCGGGCTCAGGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGAACCCGAAACGGTCGTCCTCTTCCCCCGCCCGCCGCCGCCTCCTCCTCCTCCTCCTTCTCGGCTTCCTTCTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCCCCGGGCCGGAGCGGGGTGTTGGCGGCGGCCGGTTCGGGTGGCGACTCGCGCTTCTCTGGGCGGCGGCGCT 370
Query 1 -------------------------ATGAGCCGCAGAGCCCCGGGGTCTCGGCTGAGCAGCGG----------- 38
|||||||||||||||||||||||||||||||||.||||
Sbjct 371 TGGCCATATCGTGTCGGGGAAGGTAATGAGCCGCAGAGCCCCGGGGTCTCGGCTGAGCGGCGGCGGCGGCGGCG 444
Query 39 -------------------CGGCACCAACTATTCGCGGAGCTGGAATGACTGGCAACCCAGAACTGATAGTGCA 93
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCGGCGGCGGCGGCACCAACGGCACCAACTATTCGCGGAGCTGGAATGACTGGCAACCCAGAACTGATAGTGCA 518
Query 94 TCAGCTGACCCAGGTAATTTAAAATATTCTTCATCCAGAGATAGAGGTGGTTCTTCCTCTTACGGACTGCAACC 167
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCAGCCGACCCAGGTAATTTAAAATATTCTTCATCCAGAGATAGAGGTGGTTCTTCCTCTTACGGACTGCAACC 592
Query 168 TTCAAATTCAGCTGTGGTGTCTCGGCAAAGGCACGATGATACCAGAGTCCACGCTGACATACAGAATGACGAAA 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTCAAATTCAGCTGTGGTGTCTCGGCAAAGGCACGATGATACCAGAGTCCACGCTGACATACAGAATGACGAAA 666
Query 242 AGGGTGGCTACAGTGTCAATGGAGGATCTGGGGAAAATACTTATGGTCGGAAGTCGTTGGGGCAAGAGCTGAGG 315
|||||||||||.||||||||||.||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 667 AGGGTGGCTACGGTGTCAATGGGGGATCTGGGGAAAATACTTATGGTCGGAAGTCATTGGGGCAAGAGCTGAGG 740
Query 316 GTTAACAATGTGACCAGCCCTGAGTTCACCAGTGTTCAGCATGGCAGTCGTGCTTTAGCCACCAAAGACATGAG 389
||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 741 GTTAACAATGTGACCAGCCCTGAGTTCACCAGTGTTCAGCATGGCAGTTGTGCTTTAGCCACCAAAGACATGAG 814
Query 390 GAAATCACAGGAGAGATCGATGTCTTATTGTGATGAGTCTCGACTGTCAAATCTTCTTCGGAGGATCACCCGGG 463
||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 815 GAAATCACAGGAGAGATCAATGTCTTATTGTGATGAGTCTCGACTGTCAAATCTTCTTCAGAGGATCACCCGGG 888
Query 464 AAGACGACAGAGAC------------------------------------------------------------ 477
||.|||||.|||||
Sbjct 889 AAAACGACCGAGACCGAAGATTGGCTACTGTAAAGCAGTTGAAAGAATTTATTCAGCAACCAGAAAATAAGCTG 962
Query 478 -------------------------------------------------------------------------- 477
Sbjct 963 GTACTAGTTAAACAATTGGATATCTTGGCTGCTGTACATGATGTGCTTAATGAAAGTAGCAAATTGCTTCAGGA 1036
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1037 GTTGAGACAGGAGGGAGCTTGCTGTCTCGGCCTTCTTTGTGCTTCTCTGAGCTATGAGGCTGAGAAGATCTTCA 1110
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1111 AGTGGATTTTTAGCAAATTTAGCTCATCTGCAAAAGATGAAGTTAAACTCCTCTACTTATGTGCCACCTACAAA 1184
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1185 GCACTAGAGACTGTAGGAGAAAAGAAAGCCTTTTCATCTGTAATGCAGCTTGTAATGACCAGCCTGCAGTCAAT 1258
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1259 TCTTGAAAATGTGGATACACCAGAATTGCTTTGCAAATGTGTTAAGTGCATTCTTTTGGTGGCTCGATGTTACC 1332
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1333 CTCATATTTTCAGCACTAATTTTAGGGATACAGTTGGTATATTAGTTGGATGGCATAGAGATCATACTCAGAAA 1406
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1407 CCTTCGCTCACGCAGCAGGTATCTGGGTGGTTGCAGAGTTTGGAGCCATTTTGGGTAGCTGATCTTGCATTTTC 1480
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1481 TACGCCTCTACTTGGTCAGTTTCTAGAAGACATGGAAGCATATGCTGAGGACCTCAGCCATGTGGCCTCTGGGG 1554
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1555 AATCAGTGGATGAAGACGTCCCTCCTCCATCAGTGTCATTACCAAAGCTGGCTGCGCTTCTCCGGGTATTTAGT 1628
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1629 ACTGTGGTGAGGAGCACTGGGGAAAGCCTCAGCCCAATTCGGGCCCTCCAATTACTGAGGCATACGTAACAGAT 1702
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1703 GTTCTGTACAGAGTAATGAGATGTGTGACGGCTGCAAACCAGGTGTTTTTTTCTGAGGCTGTGTTGACAGCTGC 1776
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1777 TAATGAGCGTGTTGGTGTTTTGCTCGGCAGCTTGGATCCTAGCATGACTATACATTGTGACATGGTCATTACAT 1850
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1851 ATGGATTAGACCAACTGGAGAATTGCCAGACTTGTGGTACCGATTATATCATCTCAGTCTTGAATTTACTCACG 1924
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1925 CTGATTGTTGAACAGATAAATACGAAACTGCCATCATCATTTGTAGAAAAACTGTTTATACCATCATCTAAACT 1998
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1999 ACTATTCTTGCGTTATCATAAAGAAAAAGAGGTTGTTGCTGTAGCCCGTGCTGTTTATCAAGCAGTGCTCAGCT 2072
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2073 TGAAGAATATTCCTGTTTTGGAGACTGCCTATAAGTTAATATTGGGAGAAATGACTTGTGCCCTAAACAACCTC 2146
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2147 CTGCACAGTCTGCAGCTTCCTGAGTCCTGTTCTGAAATAAAACATGAGGCTTTTAAGAATCATGTGTTCAATGT 2220
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2221 AGACAATGCAAAATTTGTAGTTAAATTTGACCTCAATTGACTACAAAATTTGTAGTTAAATTTGACTACAATTG 2294
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2295 GAAATGCCAAAAACTCACTAATAGGGATGTGGGCGCTATCTCCAACTGTCTTTGCACTTCTGAGTAAGAATCTG 2368
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2369 ATGATTGTGCACAGTGACCTGGCTGTTCACTTCCCTGCCATTCAGTATGCTGTGCTCTACACATTGTATCCTCA 2442
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2443 TTGTACCAGGCATGATCACTTTATCTTTAGTAGCCTCAGTTCTTCCTCTCCTTCTTTGTTTGATGGAGCTGTGA 2516
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2517 TTGGCACTGTAACTATGGCCACAAAGAAACATTTCTCAATTATATTAAATCTTCTGGGAATGTTACTTAAGAAA 2590
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2591 GATAACCAGGACACGAGGAAACTGTTAATGACTTGGGCTTTGGAAGTAGCTGTTGTAATGAAGAAGTCCGAAAC 2664
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2665 ATATGCACCTTTATTCTGTCTTCCGTCTTTCCATAAATTTTGCAAAGGCCTTTTAGCCGACACTCTCGTTGAAG 2738
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2739 ATGTGAATATCTGTCTGCAGGCATGCAGCAGTCTACATGCTCTATCCTCTTCCTTGCCAGATGATCTTTTACAG 2812
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2813 AGATGTGTTGATGTTTGCCGTGTCCAACTAGTGCACCGTGGAACTTGTATTCGACAAGCATTTGGAAAACTGTT 2886
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2887 GAAATCAATTCCTTTAGGTGTTTTCCTAAGCGATAACAATCACACAGAAATTCAAGAAATTTCTTTAGCATTAA 2960
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2961 GAAGTCACATGAGTAAAGCACCAAGTAATACATTCCACCCCCAAGATTTCTCTGATGTTATTAGTTTTATTTTG 3034
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3035 TATGGGAACTCTCATAGAACAGGGAAGGACAATTGGTTGGAAAGACTGTTCTATAGCTGCCAGAGACTGGATAA 3108
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3109 GCGTGACCAGTCAACAATTCCACGCAATCTCCTGAAGACAGATGCTATCCTTTGGCAGTGGGCCATATGGGAAG 3182
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3183 CTGCACAATTCACTGTTCTTTCTAAGCTGAGAACCCCACTGGGCAGAGCTCAAGACACCTTCCAGACAATTGAA 3256
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3257 GGTATCATTCGAAGTCTCGCAGGTCACACATTAAACCCTGATCAGGATGTTAGTCAGTGGACAACTGCAGACAG 3330
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3331 TGATGAAGGCCATGGTAACAACCAACTTAGACTTGTTCTTCTTCTGCAGTATCTGGAAAATCTGGAGAAATTAA 3404
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3405 TGTATAATGCATACGAGGGATGTGCTAATGCCTTAACTTCACCTCCCAAGGTCATTAGAACTTTTTTGTATACC 3478
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3479 AATCGCCAAACTTGTCAGGACTGGCTAACGCGGATTCGACTCTCCATCATGAGGGTAGGATTGTTGGCAGGCCA 3552
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3553 GCCTGCAGTGACAGTGAGACATGGCTTTGACTTGCTTACAGAGATGAAAACAACCAGCCTATCTCAGGGGAATG 3626
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3627 AATTGGAAGTAAGCATTATGATGGTGGTAGAAGCACTATGTGAACTTCATTGTCCTGAAGCTATACAGGGAATT 3700
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3701 GCTGTCTGGTCATCATCTATTGTTGGAAAACATCTTCTGTGGATTAACTCAGTGGCTCAACAGGCTGAAGGGAG 3774
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3775 GTTTGAAAAGGCCTCTGTGGAGTACCAGGAACACCTGTGTGCCATGACAGGTGTTGATTGCTGCATCTCCAGCT 3848
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3849 TTGACAAATCGGTGCTCACCTTAGCCAGTGCTGGGTGTAAGAGTGCCAGCCTGAAACATTGTCTGAATGGTGAA 3922
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3923 TCCAGAAAAAGTGTGCTGTCCAAACCGACTGACTCTTCCCCTGAGGTTATAAATTATTTAGGAAACAAAGCATG 3996
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3997 TGAGTGCTACATCTCAACTGCCGATTGGGCTGCTGTGCAGGAATGGCAGAACGCTATCCATGACTTGAAAAAGA 4070
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4071 GTACCAGTAGCACTTCCCTCAACCTGAAAGCTGACTTCAACTATATAAAATCATTAAGCAGCTTTGAGTCTGGA 4144
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4145 AAATTTGTCGAATGTACCGAGCAATTAGAATTGTTACCAGGAGAAAATATCAATCTACTTGCTGGAGGATCAAA 4218
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4219 AGAAAAAATAGACATGAAAAAACTGCTTCGTAACATGTGAAGTCCAGATCCAAGGGAACCTCAGAAATCCATTG 4292
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4293 AAGTTCCATTGTTAAGAAGTTCTGTTTGTTTGGCAACTGCTTTAAACCCGATAGAACAAGATCAGAAGTGGCAG 4366
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4367 TCTATAACTGAAAATGTGGTAAAGTACTTGAAGCAAACATCCCGCATCGCTATTGGACCTCTGAGACTTTCTAC 4440
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4441 TTTAACAGTTTCACAGTCTTTGCCAGTTCTAAGTACCTTGCAGCTGTATTGCTCGTCTGCTTTGGAGACCACAG 4514
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4515 TTTCTAACAGACTTTCAACAGAGGACTGTCTTATTCCACTCTTCGGCGAAGCTTTACGTTCATGTAAACAGCAT 4588
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4589 GACGTGAGGCCGTGGATGCAGGCATTAAGGTATACTGTGTACCAGAATCAGTTGTTGGAGAAAATTAAAGTTAA 4662
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4663 GTGGTTTTCCTTTTTTTTTTTTTGTAAGAGAAAATTAAAGGTGGTTTTTTTTTTTTAAATTTTGCTTTATTGAG 4736
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4737 GTTTATATTACACATTCTAAGTGTATGGTTTGATGAGTTCTAACATGTCTTCACTTGTGTGACCACCAATACGA 4810
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4811 TCGAGATAGAGAACAGCGTCTTACCCCAGAAGGTTCCCTTGGGATCATCTCCTCATTTGCCCCTGTCAGCAGTT 4884
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4885 ACTGATTTGCTTTCTGTCACTATGGATTAGACTTGTCTTTACTAAAGTTTCATGTACGTGAAATCATAACAACA 4958
Query 478 -------------------------------------------------------------------------- 477
Sbjct 4959 TGTTCTCTTGTGTTTGGCTTCTCTTGCTCAGCATGATATTTTTACGGTTCACCCATATTGCATGTATCAGGAAT 5032
Query 478 -------------------- 477
Sbjct 5033 ATAATCCTTTTTATTATTGA 5052
