Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10398
- Subject:
- NR_135305.1
- Aligned Length:
- 2231
- Identities:
- 477
- Gaps:
- 1754
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCTTCCTCCTCCTCGGCTTCCTCCTCAGCCCCGGGCCGGAGCGGGGTGTCGGCAGCGGCCGGTTCGGGCGGCG 74
Query 1 ----------------------------------------------------ATGAGCCGCAGAGCCCCGGGGT 22
||||||||||||||||||||||
Sbjct 75 ACTCGCGCTTCTCTGGGCGGCGGCGCTTGGCCATGTCGTGTCGGGGAAGGTAATGAGCCGCAGAGCCCCGGGGT 148
Query 23 CTCGGCTGAGCAGCGGCGGCACCAACTATTCGCGGAGCTGGAATGACTGGCAACCC------------------ 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CTCGGCTGAGCAGCGGCGGCACCAACTATTCGCGGAGCTGGAATGACTGGCAACCCAGATTGACTTGATGCAAA 222
Query 79 ----------------------------------------AGAACTGATAGTGCATCAGCTGACCCAGGTAATT 112
||||||||||||||||||||||||||||||||||
Sbjct 223 ACATCACAAAGGCTCCATGTTACACAGTATGCGATTTTTGAGAACTGATAGTGCATCAGCTGACCCAGGTAATT 296
Query 113 TAAAATATTCTTCATCCAGAGATAGAGGTGGTTCTTCCTCTTACGGACTGCAACCTTCAAATTCAGCTGTGGTG 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TAAAATATTCTTCATCCAGAGATAGAGGTGGTTCTTCCTCTTACGGACTGCAACCTTCAAATTCAGCTGTGGTG 370
Query 187 TCTCGGCAAAGGCACGATGATACCAGAGTCCACGCTGACATACAGAATGACGAAAAGGGTGGCTACAGTGTCAA 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCTCGGCAAAGGCACGATGATACCAGAGTCCACGCTGACATACAGAATGACGAAAAGGGTGGCTACAGTGTCAA 444
Query 261 TGGAGGATCTGGGGAAAATACTTATGGTCGGAAGTCGTTGGGGCAAGAGCTGAGGGTTAACAATGTGACCAGCC 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGGAGGATCTGGGGAAAATACTTATGGTCGGAAGTCGTTGGGGCAAGAGCTGAGGGTTAACAATGTGACCAGCC 518
Query 335 CTGAGTTCACCAGTGTTCAGCATGGCAGTCGTGCTTTAGCCACCAAAGACATGAGGAAATCACAGGAGAGATCG 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTGAGTTCACCAGTGTTCAGCATGGCAGTCGTGCTTTAGCCACCAAAGACATGAGGAAATCACAGGAGAGATCG 592
Query 409 ATGTCTTATTGTGATGAGTCTCGACTGTCAAATCTTCTTCGGAGGATCACCCGGGAAGACGACAGAGAC----- 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATGTCTTATTGTGATGAGTCTCGACTGTCAAATCTTCTTCGGAGGATCACCCGGGAAGACGACAGAGACTGAAG 666
Query 478 -------------------------------------------------------------------------- 477
Sbjct 667 ATTGGTCACTGTAAAGCAGTTGAAAGAATTTATTCAGCAACCAGAAAATAAGCTGGTACTAGTTAAACAATTGG 740
Query 478 -------------------------------------------------------------------------- 477
Sbjct 741 ATAATATCTTGGCTGCTGCACATGATGTGCTTAATGAAAGTAGCAAATTGCTTCAGGAGTTGAGACAGGAGGGA 814
Query 478 -------------------------------------------------------------------------- 477
Sbjct 815 GCTTGCTGTCTTGGCCTTCTTTGTGCTTCTCTGAGCTATGAGGCTGAGAAGATCTTCAAGTGGATTTTTAGCAA 888
Query 478 -------------------------------------------------------------------------- 477
Sbjct 889 ATTTAGCTCATCTGCAAAAGATGAAGTTAAACTCCTCTACTTATGTGCCACCTACAAAGCACTAGAGACTGTAG 962
Query 478 -------------------------------------------------------------------------- 477
Sbjct 963 GAGAAAAGAAAGCCTTTTCATCTGTAATGCAGCTTGTAATGACCAGCCTGCAGTCAATTCTTGAAAATGTGGAT 1036
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1037 ACACCAGAATTGCTTTGCAAATGTGTTAAGTGCATTCTTTTGGTGGCTCGATGTTACCCTCATATTTTCAGCGC 1110
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1111 TAATTTTAGGGATACAGTTGATATATTAGTTGGATGGCATAGAGATCATACTCAGAAACCTTCGCTCACGCAGC 1184
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1185 AGGTATCTGGGTGGTTGCAGAGTTTGGAGCCATTTTGGGTAGCTGATCTTGCATTTCCTACGACTCTTCTTGGT 1258
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1259 CAGTTTCTAGAAGACATGGAAGCATATGCTGAGGACCTCAGCCATGTGGCCTCTGGGGAATCAGTGGATGAAGA 1332
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1333 CGTCCCTCCTCCATCAGTGTCATCACCAAAGCTGGCTGCGCTTCTCCGGGTATTTAGTACTGTGCTGAGGAGCA 1406
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1407 TTGGGGAACGCTTCAGCCCAATTCGGGTCCTCCAATTACTGAGGCATACGTAACAGTTGTTCTGTACAGAGTAA 1480
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1481 TGAGATGTGTGACGGCTGCAAACCAGGTGTTTTTTTCTGAGGCTGTGTTGACAGCTGCTAATGAGTGTGTTGGT 1554
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1555 GTTTTGCTCGGCAGCTTGGATCCTAGCATGACTATACATTGTGACATGGTCATTACATATGGATTAGACCAACT 1628
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1629 GGAGAATTGCCAGACTTGTGGTACCAATTATATCATCTCAGTCTTGAATTTACTCACGCTGATTGTTGAACAGA 1702
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1703 TAAATACGAAACTGCCATCATCATTTGTAGAAAAACTGTTTATACCATCATCTAAACTACTATTCTTGCGTTAT 1776
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1777 CATAAAGAAAAAGAGGTTGTTGCTGTAGCCCATGCTGTTTATCAAGCAATGCTCAGCTTGAAGAATATTCCTGT 1850
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1851 TTTGGAGACTGCCTATAAGTTAATATTGGGAGAAATGACTTGTGCCCTAAACAACCTCCTGCACAGTCTGCAAC 1924
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1925 TTCCTGAGGCCTGTTCTGAAATAAAACATGAGGCTTTTAAGAATCATGTGTTCAATGTAGACAATGCAAAATTT 1998
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1999 GTAGTTAAATTTGACCTCAGTGCCCTGACTACAACTGGAAATGCCAAAAACTCGAGTCTTTAATTGTAATGACT 2072
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2073 TTGTTTTATCCACAGTTAAGCCTTTTCTCATTACATATTTATGTATTTCACTGTCATGTCAACATGTCTGCAGA 2146
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2147 ATCACTGTATGTAACAAACAGCCATATTTAAGACATGCCTGGATAAATAAAATTGGTAGGAATGTTTTCTTGCC 2220
Query 478 ----------- 477
Sbjct 2221 ATTATATTTAA 2231
