Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10398
- Subject:
- NR_135317.1
- Aligned Length:
- 2594
- Identities:
- 294
- Gaps:
- 2285
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGGGCGGCGAGCGGCGCGCACAATCCTCGCTCGGCTGCGGCTCTCGGGTGTCCCAGGCCCGGCCGGTAAGCAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCATGGCGGGTGCGGGCCCGAAGCGGCGGGCGCTAGCGGCCCCGGTGGCCGAGGAGAAGGAAGAGGCGCGGGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAAGATGCTGGCCTCCAAGCGCGCGGACGGCGCGGCGCCGGCAGGCGAGGGCGAGGGCGTGACCCTGCAGCGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACATCACGCTACTCAACGGCGTGGCCATCATCGTGGGCGCCATCATCGGCTCGGGCATCTTCGTGACGCCCACG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCGTGCTTAAGGAGGCAGGCTCGCCGGGGCTGGCGCTGGTGATGTGGGCCGCGTGCGGCGTCTTCTCCATCGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGGCGCGCTCTGCTACGCGGAGCTGGGCACCACCATCTCCAAATCGGGCGGCGACTACGCCTACATGCTGGACG 444
Query 1 -----------------------------------AT-GAGC---------------------CGCAG------ 11
|| |||| |||||
Sbjct 445 TCTACGGCTCGCTGCCCGCCTTCCTCAAGCTCTGGATCGAGCTGCTCGTCATCCGGCCTTCATCGCAGTACATC 518
Query 12 --AGCCCCGGGGTCT-----------CGGCTGAGCAGCGG--CGGCACCAACTATTCGCGGAGC---TGGAATG 67
.|||| .||||| |.|||.| |||.| |..|.|||.| |.|.|||.|| .|||
Sbjct 519 GTGGCCC--TGGTCTTCGCCACCTACCTGCTCA--AGCCGCTCTTCCCCAGC--TGCCCGGTGCCCGAGGA--- 583
Query 68 ACTGGCAACCCAG----------------------AACTGATAGTGCATCAGCTGACCCAGGTAATTTAAAATA 119
||||.||.|| |||||||||||||||||||||||||||||||||||||||
Sbjct 584 ---GGCAGCCAAGCTCATGGCCTGCCACTGCGTGCAACTGATAGTGCATCAGCTGACCCAGGTAATTTAAAATA 654
Query 120 TTCTTCATCCAGAGATAGAGGTGGTTCTTCCTCTTACGGACTGCAACCTTCAAATTCAGCTGTGGTGTCTCGGC 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 655 TTCTTCATCCAGAGATAGAGGTGGTTCTTCCTCTTACGGACTGCAACCTTCAAATTCAGCTGTGGTGTCTCGGC 728
Query 194 AAAGGCACGATGATACCAGAGTCCACGCTGACATACAGAATGACGAAAAGGGTGGCTACAGTGTCAATGGAGGA 267
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 729 AAAGGCACGATGATACCAGAGTCCACGCTGACATACAGAATGACGAAA-------------------------- 776
Query 268 TCTGGGGAAAATACTTATGGTCGGAAGTCGTTGGGGCAAGAGCTGAGGGTTAACAATGTGACCAGCCCTGAGTT 341
Sbjct 777 -------------------------------------------------------------------------- 776
Query 342 CACCAGTGTTCAGCATGGCAGTCGTGCTTTAGCCACCAAAGACATGAGGAAATCACAGGAGAGATCGATGTCTT 415
||||||||||||||||||
Sbjct 777 --------------------------------------------------------AGGAGAGATCGATGTCTT 794
Query 416 ATTGTGATGAGTCTCGACTGTCAAATCTTCTTCGGAGGATCACCCGGGAAGACGACAGAGAC------------ 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 795 ATTGTGATGAGTCTCGACTGTCAAATCTTCTTCGGAGGATCACCCGGGAAGACGACAGAGACTGAAGATTGGTC 868
Query 478 -------------------------------------------------------------------------- 477
Sbjct 869 ACTGTAAAGCAGTTGAAAGAATTTATTCAGCAACCAGAAAATAAGCTGGTACTAGTTAAACAATTGGATAATAT 942
Query 478 -------------------------------------------------------------------------- 477
Sbjct 943 CTTGGCTGCTGCACATGATGTGCTTAATGAAAGTAGCAAATTGCTTCAGGAGTTGAGACAGGAGGGAGCTTGCT 1016
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1017 GTCTTGGCCTTCTTTGTGCTTCTCTGAGCTATGAGGCTGAGAAGATCTTCAAGTGGATTTTTAGCAAATTTAGC 1090
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1091 TCATCTGCAAAAGATGAAGTTAAACTCCTCTACTTATGTGCCACCTACAAAGCACTAGAGACTGTAGGAGAAAA 1164
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1165 GAAAGCCTTTTCATCTGTAATGCAGCTTGTAATGACCAGCCTGCAGTCAATTCTTGAAAATGTGGATACACCAG 1238
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1239 AATTGCTTTGCAAATGTGTTAAGTGCATTCTTTTGGTGGCTCGATGTTACCCTCATATTTTCAGCGCTAATTTT 1312
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1313 AGGGATACAGTTGATATATTAGTTGGATGGCATAGAGATCATACTCAGAAACCTTCGCTCACGCAGCAGGTATC 1386
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1387 TGGGTGGTTGCAGAGTTTGGAGCCATTTTGGGTAGCTGATCTTGCATTTCCTACGACTCTTCTTGGTCAGTTTC 1460
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1461 TAGAAGACATGGAAGCATATGCTGAGGACCTCAGCCATGTGGCCTCTGGGGAATCAGTGGATGAAGACGTCCCT 1534
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1535 CCTCCATCAGTGTCATCACCAAAGCTGGCTGCGCTTCTCCGGGTATTTAGTACTGTGCTGAGGAGCATTGGGGA 1608
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1609 ACGCTTCAGCCCAATTCGGGTCCTCCAATTACTGAGGCATACGTAACAGTTGTTCTGTACAGAGTAATGAGATG 1682
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1683 TGTGACGGCTGCAAACCAGGTGTTTTTTTCTGAGGCTGTGTTGACAGCTGCTAATGAGTGTGTTGGTGTTTTGC 1756
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1757 TCGGCAGCTTGGATCCTAGCATGACTATACATTGTGACATGGTCATTACATATGGATTAGACCAACTGGAGAAT 1830
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1831 TGCCAGACTTGTGGTACCAATTATATCATCTCAGTCTTGAATTTACTCACGCTGATTGTTGAACAGATAAATAC 1904
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1905 GAAACTGCCATCATCATTTGTAGAAAAACTGTTTATACCATCATCTAAACTACTATTCTTGCGTTATCATAAAG 1978
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1979 AAAAAGAGGTTGTTGCTGTAGCCCATGCTGTTTATCAAGCAATGCTCAGCTTGAAGAATATTCCTGTTTTGGAG 2052
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2053 ACTGCCTATAAGTTAATATTGGGAGAAATGACTTGTGCCCTAAACAACCTCCTGCACAGTCTGCAACTTCCTGA 2126
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2127 GGCCTGTTCTGAAATAAAACATGAGGCTTTTAAGAATCATGTGTTCAATGTAGACAATGCAAAATTTGTAGTTA 2200
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2201 AATTTGACCTCAGTGCCCTGACTACAACTGGAAATGCCAAAAACTCGAGTCTTTAATTGTAATGACTTTGTTTT 2274
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2275 ATCCACAGTTAAGCCTTTTCTCATTACATATTTATGTATTTCACTGTCATGTCAACATGTCTGCAGAATCACTG 2348
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2349 TATGTAACAAACAGCCATATTTAAGACATGCCTGGATAAATAAAATTGGTAGGAATGTTTTCTTGCCATTATAT 2422
Query 478 ---- 477
Sbjct 2423 TTAA 2426
