Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10494
- Subject:
- NR_136509.2
- Aligned Length:
- 4501
- Identities:
- 1811
- Gaps:
- 2689
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTTTTGATGGGTTCCGGGTCCCAAAAGGGTTCGAGGCCTCTTGCCTTCGCTCCGTAGGAGGGAGTTCTCTTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCCTGGGGGCCGCAGGACTGTCCAGGAATACAGTTTCCAGGTGAGATCTTACTTGAAACACCGGTAGTTCTA 148
Query 1 -----------ATGGCATCTACTTGGGCTATCCAGGCCCACATGGACCAGGATGAACCTTTGGAAGTAAAGATA 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCACAGCTAAAATGGCATCTACTTGGGCTATCCAGGCCCACATGGACCAGGATGAACCTTTGGAAGTAAAGATA 222
Query 64 GAGGAAGAGAAATATACCACCAGACAGGATTGGGACCTGCGTAAAAACAACACCCATAGCAGAGAGGTCTTCCG 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GAGGAAGAGAAATATACCACCAGACAGGATTGGGACCTGCGTAAAAACAACACCCATAGCAGAGAGGTCTTCCG 296
Query 138 TCAGTACTTCAGACAGTTCTGCTACCAGGAGACATCTGGTCCCCGTGAGGCTTTGAGCCGACTCCGAGAACTTT 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCAGTACTTCAGACAGTTCTGCTACCAGGAGACATCTGGTCCCCGTGAGGCTTTGAGCCGACTCCGAGAACTTT 370
Query 212 GCCATCAGTGGCTGAGGCCAGAGACCCACACCAAAGAACAGATTCTGGAGCTGCTGGTGCTGGAGCAGTTCCTG 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCCATCAGTGGCTGAGGCCAGAGACCCACACCAAAGAACAGATTCTGGAGCTGCTGGTGCTGGAGCAGTTCCTG 444
Query 286 ACCATCCTACCTGAGGAGCTCCAGGCCTGGGTGCAGGAGCAGCATCCAGAGAGTGGGGAGGAGGTGGTGACTGT 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ACCATCCTACCTGAGGAGCTCCAGGCCTGGGTGCAGGAGCAGCATCCAGAGAGTGGGGAGGAGGTGGTGACTGT 518
Query 360 GCTGGAGGATTTAGAGAGAGAACTGGATGAACCAGGAGAGCAGGTCTCAGTCCACACTGGGGAACAGGAAATGT 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCTGGAGGATTTAGAGAGAGAACTGGATGAACCAGGAGAGCAGGTCTCAGTCCACACTGGGGAACAGGAAATGT 592
Query 434 TCTTGCAGGAGACGGTACGTCTACGAAAAGAAGGAGAACCCAGTATGTCCCTCCAGTCCATGAAAGCCCAGCCA 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCTTGCAGGAGACGGTACGTCTACGAAAAGAAGGAGAACCCAGTATGTCCCTCCAGTCCATGAAAGCCCAGCCA 666
Query 508 AAGTATGAATCTCCAGAACTTGAATCCCAACAGGAGCAAGTTTTAGATGTTGAGACTGGAAATGAGTATGGGAA 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAGTATGAATCTCCAGAACTTGAATCCCAACAGGAGCAAGTTTTAGATGTTGAGACTGGAAATGAGTATGGGAA 740
Query 582 TTTAAAGCAAGAAGTTTCTGAAGAAATGGAACCACATGGGAAGACATCCAGTAAATTTGAAAATGATATGTCCA 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTTAAAGCAAGAAGTTTCTGAAGAAATGGAACCACATGGGAAGACATCCAGTAAATTTGAAAATGATATGTCCA 814
Query 656 AGTCTGCTAGGTGTGGAGAAACTCGTGAACCTGAAGAAATAACAGAAGAGCCCTCTGCTTGCTCCAGAGAAGAT 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGTCTGCTAGGTGTGGAGAAACTCGTGAACCTGAAGAAATAACAGAAGAGCCCTCTGCTTGCTCCAGAGAAGAT 888
Query 730 AAACAACCTACCTGTGATGAAAATGGAGTAAGCCTGACTGAGAACTCTGACCATACTGAACATCAGAGAATCTG 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AAACAACCTACCTGTGATGAAAATGGAGTAAGCCTGACTGAGAACTCTGACCATACTGAACATCAGAGAATCTG 962
Query 804 TCCAGGAGAAGAATCTTACGGATGTGATGACTGTGGAAAAGCTTTTAGTCAGCACTCACACCTCATAGAACATC 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCCAGGAGAAGAATCTTACGGATGTGATGACTGTGGAAAAGCTTTTAGTCAGCACTCACACCTCATAGAACATC 1036
Query 878 AGAGGATCCATACTGGAGATAGACCCTACAAATGCGAAGAATGTGGAAAAGCTTTCCGTGGGAGAACTGTGCTT 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGAGGATCCATACTGGAGATAGACCCTACAAATGCGAAGAATGTGGAAAAGCTTTCCGTGGGAGAACTGTGCTT 1110
Query 952 ATTCGACACAAAATAATACACACTGGAGAGAAACCGTATAAGTGTAATGAATGTGGCAAAGCCTTTGGCCGGTG 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATTCGACACAAAATAATACACACTGGAGAGAAACCGTATAAGTGTAATGAATGTGGCAAAGCCTTTGGCCGGTG 1184
Query 1026 GTCAGCTCTTAACCAACATCAGAGACTTCACACAGGAGAAAAACACTATCACTGTAATGACTGTGGCAAAGCCT 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GTCAGCTCTTAACCAACATCAGAGACTTCACACAGGAGAAAAACACTATCACTGTAATGACTGTGGCAAAGCCT 1258
Query 1100 TTAGTCAGAAAGCAGGCCTCTTTCACCATATCAAGATCCACACAAGAGACAAACCTTATCAGTGCACTCAGTGT 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TTAGTCAGAAAGCAGGCCTCTTTCACCATATCAAGATCCACACAAGAGACAAACCTTATCAGTGCACTCAGTGT 1332
Query 1174 AATAAAAGTTTTAGTCGGCGTTCCATACTTACTCAGCATCAAGGAGTTCATACCGGCGCCAAGCCGTATGAGTG 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AATAAAAGTTTTAGTCGGCGTTCCATACTTACTCAGCATCAAGGAGTTCATACCGGCGCCAAGCCGTATGAGTG 1406
Query 1248 CAACGAGTGTGGAAAAGCCTTTGTTTATAACTCATCCCTTGTTTCCCATCAGGAAATCCACCACAAAGAAAAAT 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CAACGAGTGTGGAAAAGCCTTTGTTTATAACTCATCCCTTGTTTCCCATCAGGAAATCCACCACAAAGAAAAAT 1480
Query 1322 GCTATCAGTGTAAGGAATGTGGGAAATCCTTCAGTCAGAGTGGCCTTATTCAGCATCAGAGAATTCACACTGGG 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GCTATCAGTGTAAGGAATGTGGGAAATCCTTCAGTCAGAGTGGCCTTATTCAGCATCAGAGAATTCACACTGGG 1554
Query 1396 GAAAAACCCTACAAATGTGACGTATGTGAAAAAGCCTTTATTCAAAGGACAAGTCTTACAGAACATCAGCGAAT 1469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GAAAAACCCTACAAATGTGACGTATGTGAAAAAGCCTTTATTCAAAGGACAAGTCTTACAGAACATCAGCGAAT 1628
Query 1470 TCACACTGGAGAAAGACCCTATAAATGTGATAAGTGTGGGAAGGCGTTTACTCAAAGATCAGTCCTCACGGAAC 1543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TCACACTGGAGAAAGACCCTATAAATGTGATAAGTGTGGGAAGGCGTTTACTCAAAGATCAGTCCTCACGGAAC 1702
Query 1544 ATCAGAGAATCCACACTGGAGAGAGGCCCTACAAGTGTGATGAGTGTGGGAATGCCTTCCGAGGAATCACCAGC 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 ATCAGAGAATCCACACTGGAGAGAGGCCCTACAAGTGTGATGAGTGTGGGAATGCCTTCCGAGGAATCACCAGC 1776
Query 1618 CTCATTCAGCATCAGAGAATCCACACTGGGGAGAAGCCCTACCAATGTGATGAGTGTGGAAAAGCCTTCAGACA 1691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CTCATTCAGCATCAGAGAATCCACACTGGGGAGAAGCCCTACCAATGTGATGAGTGTGGAAAAGCCTTCAGACA 1850
Query 1692 GA------------------------------------------------------------------------ 1693
||
Sbjct 1851 GAGGTCAGATCTTAGTAAACACCAGAGAATCCATAATAGACGTGGTACCTATGTATGTAAAGAGTGTGGGAAAT 1924
Query 1694 -------------------------------------------------------------------------- 1693
Sbjct 1925 CATTCAGGCAGAACTCAGCTCTTACTCAACATCAGACTATCCACAAAGGAGAAAAATCTGTTTCTGTGTGATGA 1998
Query 1694 --------------------------------GGAAGAAGACCAGCTACAAGGAAATACTTCTGAAAAATCACT 1735
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CTACAGGGAAGTTATCTCACAGAGTTCAGGCCGGAAGAAGACCAGCTACAAGGAAATACTTCTGAAAAATCACT 2072
Query 1736 CTGAACCCCAAGCTGGAGTGAATCTTCTCCTGAGCTCTCTCATTCCAGAATGGCAATCTTGNTTCAGGAGAGAT 1809
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 2073 CTGAACCCCAAGCTGGAGTGAATCTTCTCCTGAGCTCTCTCATTCCAGAATGGCAATCTTGTTTCAGGAGAGAT 2146
Query 1810 CTC----------------------------------------------------------------------- 1812
|||
Sbjct 2147 CTCTAATAGTGACTGATGGTAAAGGAAGAAGGCTGTGCCTAGAACAAAGAATCAGGCTGGCAAAGAAATCACAG 2220
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 2221 GTCTTTCCTCAAACTTTAAATTGCTACTCTCTGGAGATAGCTACCTGGACTTTACAGAGCTGTCAGAAGACTTG 2294
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 2295 GGAAGGTTTGCCAGCATTGGAAAAAGCCACTTGGACTTCACAGAGCTGTCAGAAGACTTAGGAAGCTTTGCCAG 2368
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 2369 TAGTTCCTGAGACCAGAAATACATATTATGAAGCAGGTGCTGGAACAGGCCCTGGCCCCTACTTGTGAAGCTGC 2442
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 2443 AGATATAGATGGTGTTACTGAGAAGGAAACTAAGGACTTGGCTCCAAAACAAAACAAAACAAAATCTGGAGATG 2516
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 2517 CTGAATTTTGTTGGGGGGAATGTCTGTAGAACTGCAACATCAATGCAGTAAGTGTAGTAAAAGCTTTAGTTTAT 2590
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 2591 GGTGAGTCATTACTCAGCATCATGGAGTCCACGATGAAGAGAATCTCTTTTCAATCTGTGCAATCAACAAGTTT 2664
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 2665 TTGAAAGGCTTTTGTTTATAGTGGAACCCTCTTTTCCCCCTAGAAGAACCACCACAAGGAAAAATGCTGTCACC 2738
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 2739 ATAAGGAATGTGGGAAAGTTTTCAGCCACATGGCCTTATTTGACTTCAAAGAATCCACATGAGAGAGAGACTGC 2812
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 2813 ATAAATGTAATAACTGAGGAGGCCTTTGTTCAGCAAAGAAACCTTATACAAACTCGTATAAAGAATGTAGGAAG 2886
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 2887 ACCTTCACCCAGAAGCCAGGACTGACTGTGCACCAGAGAATCTGCACAATAAACATGATGAATGTGGAGATGCT 2960
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 2961 TGCTTCAGCATTGGAGAATTCACAGTAAAGGGAAACCCTGCCAGTGTGATGAGTACGGAAAAGTCTTCAGAGGT 3034
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 3035 TGGAACTTGGGAAAAATCAGTGAGTGAATTCATATTAGAGAGGCTCTTATAAATGAGAGGATTGTGGAAACTTG 3108
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 3109 TATAGACAGAGATCAGACCTCAACAAGGGAGCCTCCACAGTATTGAAAAGTTAATATAATTAATGTAAGTGGGC 3182
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 3183 AAGTTGTATGGGGAATGGGTAGTCTAAATTGCTCATTTTAGCCAGTAAAAACATTAAATTAGTTTCTTAGATCA 3256
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 3257 AGAAAAGGAAATGTTAGAAGTTATTTTTCCCTTCCAGAGGGGTCTATATGTGTAAGCAACCAGGACTTTTGAAA 3330
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 3331 TAAGTTGCATCTCTGGATTTGTGATCTGTCTCCTGGATGATTATCTCTGTTTTGGGAGACAGGTATTTTTTCTT 3404
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 3405 CATGCCTGCTCTAGTCTCATCTCATATCTTTAATTCATTCAGCAAGTATACACAATAGTATTATCGTCTACTGT 3478
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 3479 TTGTTGTAAATATATATATATTATTTTCTTTTTGGTCTGAGTAGGCTTGTATTGGTACCCTAGGACATAAAAAT 3552
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 3553 CACATATATCATGTTTCAGTAAATGCAGTGAAAGGAACTATATTATTAAATTGCTGGGAATTTCTGTAAATTTG 3626
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 3627 AGACTACCTTTATATTCTCCAACACAAGACCGTGTAGGTGTCCCTTCAGAGAGTATATTTTTCTAGCTTGGCTT 3700
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 3701 CTTTATTTTCTTTATTTTTTTGAGATGGAGTCTTGCTCCTGTCGCCCAGGCTGGAGTGCAATGGCACGATCTCG 3774
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 3775 GCTCACTGCAACCTCCGCCTCCCAGGTTCAAGTGATTCTCCTGTCTCAGTCTCCCGAGTAGCTGGGATTACAGG 3848
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 3849 CACTTGCCACCATTCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTC 3922
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 3923 TCGAACTCCTGACCTTGTGATCTGCCCACCTTGGCCTCCCAAAGTTCAGGGATTACAGGCATGAGCCACCATGC 3996
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 3997 CCGGCTGTTTTTTTAAGATAGAAAAATATACTTCATGTATAGCCTATTGACAGATAATGACTGATATTTTTTCT 4070
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 4071 TATAGATAACACATAATAAACATTGTGAAGACTAATAAGTAACTTGCTTATTCTTTTCAGTTCTAAAACCTGTA 4144
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 4145 GGAAAGAATCTTTAGAAGCTGTCAACAAGTTGATAATGTAGCCCAATCTCTACCCATGATAGGAGAGTAAGGCT 4218
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 4219 TATATATTTTATAGTAGGGCACTAAATACAGGAACCATGTATTTAAAAACTTTTTAGTGATTATCTCAGAATTC 4292
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 4293 TAGGTGTCCCTCTGCTGTACATCCCTAAATTTTTTGCATAGGTATTATTAATAAATTCATTATTTTCAAAGATG 4366
Query 1813 -------------------------------------------------------------------------- 1812
Sbjct 4367 GACTGTGTTCTGTAAAAAGCTTTTCCAGTATCTGCAAATCACACAGTTTTTTTTAACTCTATTACTATTATATA 4440
Query 1813 ------------------------------------------------------------- 1812
Sbjct 4441 AAATGATTTCTTAATATTGAACCAACCTTGCATTCCTAGAATAAACCTCACTTAGCCATGA 4501
