Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10513
- Subject:
- NR_003572.2
- Aligned Length:
- 5818
- Identities:
- 341
- Gaps:
- 5435
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAAGGCGGGGCCGGGCCGGGGCGGGGTCTCGGGCAGGGGCGGGGAGCTTACCGACCTCCCGCCCCCGCTGCGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGTTTCTGGCCCTGCCAGTGTCTCCGCCGGTTGAAAGCGCGTGTCTGCGTCGGGTTCTGTTGGAGTGCGTTCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTGCCGTGGGTCCGCGCTGCTTCCACCCAACTTCCTGTTAGAGTTTCTCTCCTGTCACAATGGCATGGTCTCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTCACTGCGACCTCTGCTTCCTGGGTTCAAGGATTCTCCTGCCTCAGTCTCCCAAGTAGCTGGGATTACAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCACCCGAGGACGGGTCACCATGGCTTTGGAGCACCTGGTAGTGTGGCATGTCCACAGTGAAGACCAGAGTTT 370
Query 1 ----------------------------------------------------ATGGCACCGAAAGTGAAGAAGG 22
|.||||||||||| .|||||
Sbjct 371 CGTTGTCCTTAAGACTGACCTGGGGAGACGTGGCTGCAGGCCATTGAGGAAGACGGCACCGAAAG---CGAAGG 441
Query 23 AAGCTCCTGGCCCGCCTAAAGCTGAAGCCAAAGCAAAGGCTTTAAAGGCCAAGAAGGTAGTGTTGAAAGGTGTC 96
|||||||||..||.||||||||.||||||||||..||||||||||||||||||||||.||||||||||||||||
Sbjct 442 AAGCTCCTGCTCCTCCTAAAGCCGAAGCCAAAGTGAAGGCTTTAAAGGCCAAGAAGGCAGTGTTGAAAGGTGTC 515
Query 97 CACGGCCACA--AAAAAAAGAAGATCCGCATGTCACCCACCTTCCAGCGGCCCAAGACACTGAGACTCTGGAGG 168
|.|.|||||| .|||||||||||||||||||||||.|||||||..||||||||||||||||.||||..|||||
Sbjct 516 CGCAGCCACACGCAAAAAAGAAGATCCGCATGTCACTCACCTTCAGGCGGCCCAAGACACTGCGACTTCGGAGG 589
Query 169 CCGCCCAGATATCCTCGGAAGACCACCCCCAGGAGAAACAAGCTTGACCACTATGCTATCATCAAGTTTCCTCT 242
|.||||||||||||||||||||.|||||||||||||||||||||||.|||||||||| |||||||||||.||
Sbjct 590 CAGCCCAGATATCCTCGGAAGAGCACCCCCAGGAGAAACAAGCTTGGCCACTATGCT---ATCAAGTTTCCGCT 660
Query 243 GACCACTGAGTTTGCTATGAAGAAGATAAAAGACAACAACACCCTTGTGTTCACTGTGGATGTTAAAGCCAACA 316
|||||||||||..|| ..||||||||||.||||.|.|||||..|||||||||...|||||||||||||||||||
Sbjct 661 GACCACTGAGTGGGC-CGGAAGAAGATAGAAGAAAGCAACATGCTTGTGTTCTTCGTGGATGTTAAAGCCAACA 733
Query 317 AGCACCAGATCAAACAGGCTGTGAAGAAGCTCTGTGACATTGATGGGGCCAAGGTCAACAC----------CCT 380
||||||||||||.||||||||||||||||.|||.|||||.|||||.|||||||||||.||| |||
Sbjct 734 AGCACCAGATCAGACAGGCTGTGAAGAAGGTCTATGACAGTGATGTGGCCAAGGTCACCACCCTGATTTTTCCT 807
Query 381 GATGGAGAGA---------------------------------------------------------------- 390
|||..|||||
Sbjct 808 GATAAAGAGAACAAGGCATATATGTTCGACTGGCTCCTGATTATGAAGCTTTGGATGTTGCAACAAAATTGGGA 881
Query 391 -------------------------------------------------------------------------- 390
Sbjct 882 TCATCTAAACTGAGTCCAGCTGGCTAACTCTAAATACATGTGTATCTTTTCACCATAAAAGAATAATGTTTTTC 955
Query 391 -------------------------------------------------------------------------- 390
Sbjct 956 ATAAGAGTGACAACTTAATTAGAATCAAATCTATAAGCTTTAAGATTTTACATTTCTGTAAGTATAATATTAGC 1029
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1030 TTATTTGACTAGAACTCAAGCAGAATAGGAATTTATGTTTGTTTTATATTCAAGTGATAACTTTGAAGACATAG 1103
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1104 TTTTATTACACCAAAAATTTTATATTAATCTCATTTAAGTAAGTTTTATCCAAATCATGTTAACTTAAAAAACA 1177
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1178 TTTGATCAGTTCCTATATTTCTAGGAGTTTGGTGAATATTTATTTATAAATGGTTATTTTTTTCCAAGCCAAGT 1251
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1252 TAGAATAGAGCACTTTTATAGGATTTTATAAATGAATTTTGCAGTGCTATCCGGAGTTAAGAAAATATCACATA 1325
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1326 TACATTACATACAGTAATAGATATACAAACACAAATAGAGATTTCATAGCTTTCATCCTGAAATTTCAGCCATG 1399
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1400 AATCAGGCATAAATATTCTGATGGTTAATTTTAGACATCTACTTGATTGGATTAAGAAACATACATAGCTGGTC 1473
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1474 AAACAATTTCAGCCATGAAACAGGCATAAATATTCTGATGGTTAATTTTAGACATCTACTTGACTGGATTGAGA 1547
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1548 GACACACGTAGCTGGTGAAACACAATTTCTGGGCATATCTGTGAAGGTGTTTCTGGAAGACACTGAGATAACCC 1621
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1622 TGACCCAGTGTGGATGGGCACTGATATGGTTTGCCTGTGTCCCCACCCAGATCTCATCTTGAATTGTAGTTCCT 1695
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1696 ATAATCCGTACATGTCGTGGGAGGGACCCAGTGGGAGGTGATTGAATCATGGTGGTTGTTACTGCCATTCTGTT 1769
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1770 TTCATGGCAGTGAGTGAGTTCTCATGATCCAATGGTTTCATAAGGGGCTGTTCCCCTTTGGCTCAGCACTTCTT 1843
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1844 CTTGTTGCTGCCATGTGAAGAAGGACGTCTTTGTTTCCCCTTCTGCCATGATTGTGAGGCCTCTGCAGCCACGT 1917
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1918 GGAACTGTCAGCCCATTTAACCTCTTTGTTCTTTATAAATTGCTCAGACTCAGGTATTTCTTCACAGCTGTATA 1991
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1992 AAAATGGATGAATACAGGCACCATCCAATTGGTTGAGAGCCCAGATAGAATAACAAGGAAGAGGAAAGGTGAAT 2065
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2066 TATCTCCTGAAATTGAAACATCCTTCTTCTCCTGCCCTTGACATCAGAATCAGTGTCTCAGAGCTTTGGCCTCA 2139
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2140 GAATCAGAGTTACACCATTGGCTTCCCTGATTCTGAGTCCTTTATATCTGGAGTGAGTCATGCTGCCAGCTTTC 2213
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2214 CTGGTTCTCCAACTTGGAGACAGGCTATTGTGTAACTTCTCAGCCTCCATAATTATGTGAACCAATTCCCCTAA 2287
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2288 TGAGTCTTCTCTCATCTATCTACATATATCCTATTGATTCTGCCTTTCTGGAGAACCCTGACTAATGTTATTAC 2361
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2362 AATAATACAAAATTCACTAGTTTATATAGAAGACTTGGTTTTTGTCTTTGCCCCATTTTGTATTTGTATTATAA 2435
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2436 CTGTGTATCTGGAAAATGGAACAAGTTTTTATCTTCTTCATATGAGGGCCAAAGCTTTTTTCTCACCAATATTT 2509
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2510 TTGGAGATTTTTAAGATTTTCTTTTGTTTGGACATACAATCTTATGGAGGCTGAGAAATAAAATTTTTTCTATT 2583
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2584 TTATTTTTCAGCCCCAGATGTTTGCTTTTGCAGATTCTTGAGCACATTGAGAGCATGGAGAGCACTCCAAGGCA 2657
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2658 TGGAGTGGGGTGCCTAAAGTTTCAGTGATTACAGGGAGTTGAGAGACTCAACTGGGAAAGGAAAAGTCTAAAAG 2731
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2732 GAGGCAATTTGGAAGATAAAAATTTTCTCAAAGGAGCGATTAAATTTCTAAATAATTCTTAGTAAAATCATGTA 2805
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2806 AACAGGAAAGGAAATAGAATTAGTTCCATATTGGTGGAACACATAGCAGAGGTTTGAGAAGGGAGAATTTAGTC 2879
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2880 AACTGAGAAGTTCTCATGAAAGGAGCAAGTTCAAGATCACAGAGACACCTTGAAACAAAAAGCCAGGAATAACT 2953
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2954 TCCAACCCAAGAGGAGAACAGAGAGGCCTCAAAACCAAAGCTAGGATAAGAAACTTGTAGCCCAAGAGTTATCT 3027
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3028 TCCAGACAAAGAAGCCTGAGATTCCAACGCAGCTTCAGAGAGTGCTCACTCAAAATGTTACTGAAACTGAAGGC 3101
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3102 TTTTTAATGACTTAGCCATGCCTGCAAAAGGCATTCCCTAAGGTGGCACAGAAGACGGAGCCCCCATATCCAAA 3175
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3176 GATAGCCAAGGAGAAAGAAAGACCCCTGTTGCCAGAGCCAGTGGGCAAAGGCAACAGAAAAGGAGACAAGGGTC 3249
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3250 CTAATGGGATGAGATCCTTTCGGATTTAGGCTTTTATACAAACTCCTGAGAACTGGCGGGTTGACAGCCATAAA 3323
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3324 TGGGGTACCAAACTTTCTACTCATTGGATTACAAGTTCTCAGGCATCCAGAATGATGAACAAAATGACAATTTC 3397
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3398 TAGGGCTTCTGTGGGAGAGTATGGAAAGGTCTTTTTGAACCTTTTAATGCTGTCAACGGAAGAATGATGAGGTT 3471
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3472 CATAAATTTGGAAAGGAGACATTTCTTCATTTTTATGTTTATTTTTATTTTTTTTGAGACAGAGTTTCACTCTT 3545
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3546 GTTGCCCAGGCTGGAGTGCAATGGCGTGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTC 3619
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3620 CTGCCTCAGCCTCCTGATTAGCTGGGATTACAGATGCCCACCACCACACCTGGCTAATTTTTTGCAGTTTTAGT 3693
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3694 AGAGACAGGGTTTCATCATGTTGGCCAGGCTGGTCTGAAACTCATGAGCTCAGGTGATCCACTTGCCTTAGCCT 3767
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3768 CCCAAAGTGCTGGGATTGCAGGCATGAGCCACCCAACCAGTGAGAGATTTATTTCCTATAAAGGGTTGTAGCCT 3841
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3842 GCAGGGTTGTCCTTCTGACAGGCTGGGAAGCATAGCCTCCAGCCAGAAGCCAGAAACAGACTCTTCAAGGAGGA 3915
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3916 GGTAAAGGAAATAGCAATTTATGCTGACTGGAATGGCCAAATACATTTATTTAATAAGCTCCAGGAGGAGTCAT 3989
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3990 GAATATTTATGGAAGGAGAAATGCATGCATGCACAATTGAGTTTCTGGCTTCTTCATGGGTCCCATGTACAAAA 4063
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4064 AATGGCAGTGTTAGCATGATCCCAGGGTGGAGTTTTCAGCCCTCTGACATTAAAAGGTGAAGCAGAGGACATGA 4137
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4138 AAACTCGCTCTGTGCATCCTCTGTACGCTGGCCAGAACCTCTCTGTTGTGGGTGGTCTCTTATCAGGCAAGAAA 4211
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4212 GGAGAGGTTGATATCGGTAGTGGAGGCTTTGAAAGGGCTGGTTTCTGTTAAATCCTTAGGGAAGAAAGCCTCAT 4285
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4286 CATGGTTAGCAAAGGAGTGGGTTTAACGATGTGTATGTTAACCCCATCATCCCATCCTAGCAAAGCTGAGAACT 4359
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4360 CAGTTTTGAAAGTTACTCTGTGGTCCCCTCAGCCAAGAGTGGTTCTGTTCAGTCAGTTGGGAGCTTATAATTTA 4433
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4434 ATTTTTGTTTATCAATGCTAATGCGAAAGAGTACGCTGTCTTCATGGCAGCTGAATTTGCAAGAAACTCCTTGG 4507
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4508 ATGGGGTTAATGGCAGCTGTATTTTTCTGGGAGCTCTGCTTTAATTGGACAAAGTAAGTTGTGGTAAGATTTCT 4581
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4582 TCTTTTATCTTCAGTATCTCAAATGTTTTCATTTAAATAATCTTTATAACAACTTTTGATGTCTGAGTGGATTC 4655
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4656 CCATACAGTCATCTATTGTAAGACTTTCTGATTCCGTTTTTTTCCTTTGGTCATTATGAATAGGGCTTATGTAA 4729
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4730 ATAATTGCATGGTAGCTTTTGATTGGAAATAACATCAAAGTAGTTGTCAAAATACTTAGGAATGTTATTTTTGG 4803
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4804 ATTGTAAGGTGAGACTTGTTTAGCTTTGGAAAAAAATGCCCAACTTGTAATAGGGGAGGAAAAATAATTTTCTG 4877
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4878 TTTTCGGAATTCTTAGATGGGATGCTCTGTAAAAACTGACAGATTAAAATGAGAAAAACAGAAAAGTTGAAAAA 4951
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4952 CACGTATACCTTATGGTTACATGGGAGATATTCAGGGAAAAATGAGTAAATCTCCAACAGGTGGCTTTCAATTC 5025
Query 391 -------------------------------------------------------------------------- 390
Sbjct 5026 AAGCATAAATACTGTCTTCAACTTAAAGAAAGAAGATTTGAGGTGCAGTATTGGGGAGTTAACCAGCAAAAGCA 5099
Query 391 -------------------------------------------------------------------------- 390
Sbjct 5100 CATTAGACAAGGGTAAGGTTCATTATACAGACTTAAGTCCATGCATTCTCCATTGATAAGACTCTTTAGTGATT 5173
Query 391 -------------------------------------------------------------------------- 390
Sbjct 5174 TAGTTATCCTTCTCTTCTTGGTGTCGAGAGAGGTAGCTTTTAAATGGTGATTTCCTTTATAGATGTAAATTTTC 5247
Query 391 -------------------------------------------------------------------------- 390
Sbjct 5248 CTTACACAAGTGTAACTTCTCTGTTTTCACAACTTCCTTTGTTAGCATTTTTTTTTTTCAAAATAATTAGCTTG 5321
Query 391 -------------------------------------------------------------------------- 390
Sbjct 5322 GAATAATTCTTAAGCCAAAGGGACATATTTTGGGGTTGCATATTCTGGTTTCCTACCATTATATTTTGGGGTGG 5395
Query 391 -------------------------------------------------------------------------- 390
Sbjct 5396 CATATTTTGGTCTTATACACTGTGTTCCACCGGCAATGAAAAGAGTTCTTGTTTTTCCTCCAGCAATTTGTCAT 5469
Query 391 -------------------------------------------------------------------------- 390
Sbjct 5470 TTGTTAAAGAGTTTAGCAGTTCTAAGAGATATAGACCAGCTGTGCTATCTTTTTGTGGTTTTCAGTTCTCTAGT 5543
Query 391 -------------------------------------------------------------------------- 390
Sbjct 5544 ATGTTGAGCATCTTTTTGTAAGTGTACTTGCCATCTGTAGATCTTCTTTGGTGAGGCGTCTGTTCAGATCTGTG 5617
Query 391 -------------------------------------------------------------------------- 390
Sbjct 5618 TGCATTTTTAATTGGGCTGTTTAACTTATTGTTTAGTTTTAACAATTTTTTATGTATTTTGAATACAAATTCTC 5691
Query 391 -------------------------------------------------------------------------- 390
Sbjct 5692 AGATCTGTATTTTGCAAATATTTTCTTCAATATGTGGCTTGTCTTTTGGTTCTCTTAACAAGGTCTCTTCCAGA 5765
Query 391 ---------------------------------------------- 390
Sbjct 5766 GTATAAACTGTAAATATTAAGAAAAAAAAAAAAAAAAAAAAAAAAA 5811
