Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10513
- Subject:
- NR_029406.1
- Aligned Length:
- 2259
- Identities:
- 349
- Gaps:
- 1872
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AATATCTCGTCATGGACTGTGCCCCGCTCGAGCCTCTCCACATGCAGCCGGAAGGAAAGTGGAGGGAGCTGCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTTCCGTAGCCGGGGTGCCCACCCCAACCAGGCTGCCTCTGCCACCCAAGACAGAGGTTCTCTGATAATAATT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGTGGGGCTTGTTTCCAGAGACCACACCTGAAGCTGCCAACTCCCCGGAGGGAAGGTCCTGATTAATGGCCGAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAATTTCTCCTTAAGGCCCTGAAACTGCCTACTCAGAACCAAGCCAGTTTTTCCTGCCTGTCCTGTTTGGGCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCAGAGGAGGCAGCTAGAAACCCATTATGCAGGGGATGGGGACCAAACCAATGCACAACTCCTACGTACTGATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGGTCTTACGTTTCCCTAAGTTTCTGCCGACTAAACTGTGCACACGTTCTCAGGACCTCCTGAAGCTGCGTCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGGCGCTGATCAAAGAACACAACCAAGAGTTTGGCCTTTTCTTCAGCACTGGGAATTGTGATCCAAAGCTTTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTGATGAGGTACAAAGTTGGAGAAACAAAACGCAAACTAAGCAACAATGAAACAGAACAGAGTGAATCTGCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAGCTCAAGAGAGGACGTAGCTGCCCCCACCCCGCATCCCTGGGCTCGGGTTTGCCTTGCTGACCTCTGCTGCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACCTGGTGCCGCACAGAGAAACTGAGGAGAAACCACATCAGTCTCCTTCAGCCTCAGCTTCACATCTGTGGGTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAGCAACCCTTTCAGAAGCTGTATAATGTGGGAAAGCTTTCCTCTCAGGAAAATGCACACATCCAACTTTGAGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGATGCCCTTGGGGGTGCTTCAAGGATCCTAGATAATAACCCCCTTTCCCGAACATCCAAGAACCTAAGTTTTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTTTTTTTTTTTGAGAAAGTCTCGCTCTCTCTCCCATTCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCCACCTCCCAGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGGCTACAGGCACCTGCCACCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CACCCGGCTAATTTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGAATCGTCTTGATCTCCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACCTTGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCACACCTGGTCCAAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AACCCAACTTTTAGATCTAGAGTGATGTCAGCATGACATTGATTTCCTGAGGCCCAGGGGTGAAGGAGCTGAGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACAGCAGAGGGGTGAAGGAAGTCAGCTACAGACAGCAGCAGCTGATGCACAGGCCTCCCAGCGCCTGAAGTCAC 1332
Query 1 -------------------------------------------ATGGCACCGAAAGTGAAGAAGGAAGCTCCTG 31
||||||||.|||| .||||||||||||||
Sbjct 1333 CCGGAATTGGGAAGTGCTCAGAAGCTTACAAAGCTGCCTCGAGATGGCACCAAAAG---CGAAGGAAGCTCCTG 1403
Query 32 GCCCGCCTAAAGCTGAAGCCAAAGCAAAGGCTTTAAAGGCCAAGAAGGTAGTGTTGAAAGGTGTCCACGGCCAC 105
..||.||||||||.|||||||||||.||||||||||||||||||||||.|||||||||||||||||.|.|||||
Sbjct 1404 CTCCTCCTAAAGCCGAAGCCAAAGCGAAGGCTTTAAAGGCCAAGAAGGCAGTGTTGAAAGGTGTCCGCAGCCAC 1477
Query 106 A--AAAAAAAGAAGATCCGCATGTCACCCACCTTCCAGCGGCCCAAGACACTGAGACTCTGGAGGCCGCCCAGA 177
| .|||||||||||||||||||||||.|||||||..||||||||||||||||.|||||.||||||.|||||||
Sbjct 1478 ACGCAAAAAAGAAGATCCGCATGTCACTCACCTTCAGGCGGCCCAAGACACTGCGACTCCGGAGGCAGCCCAGA 1551
Query 178 TATCCTCGGAAGACCACCCCCAGGAGAAACAAGCTTGACCACTATGCTATCATCAAGTTTCCTCTGACCACTGA 251
|||||||||||||..|||||||.||||||||||||||.||||||||||||||||||||||||.|||.|||||||
Sbjct 1552 TATCCTCGGAAGAGTACCCCCACGAGAAACAAGCTTGGCCACTATGCTATCATCAAGTTTCCGCTGGCCACTGA 1625
Query 252 GTTTGCTATGAAGAAGATAAAAGACAACAACACCCTTGTGTTCACTGTGGATGTTAAAGCCAACAAGCACCAGA 325
||..||..|||||||||||.||||.||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 1626 GTCGGCCGTGAAGAAGATAGAAGAAAACAACACGCTTGTGTTCACTGTGGATGTTAAAGCCAACAAGCACCAGA 1699
Query 326 TCAAACAGGCTGTGAAGAAGCTCTGTGACATTGATGGGGCCAAGGTCAACAC----------CCTGATGGAGAG 389
|||.||||||||||||||||.|||.|||||.|||||.|||||||||||.||| ||||||..||||
Sbjct 1700 TCAGACAGGCTGTGAAGAAGGTCTATGACAGTGATGTGGCCAAGGTCACCACCCTGATTTGTCCTGATAAAGAG 1773
Query 390 A------------------------------------------------------------------------- 390
|
Sbjct 1774 AAGAAGGCATATGTTCGACTTGCTCCTGATTATGATGCTTTCGATGTTGTAACAAAATTGGGATCACCTAAACT 1847
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1848 GAGTCCAGCTGGCTAACTCTAAATATATGTGTATCTTTTCAGCATAAAAAAATAATGTTTTTCATAAGAATGAC 1921
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1922 AACTTAATTAGAATCAAATCTATAAGCTTTAAGATTTTATGTTTCTAGTAAGTATAATATTAGCTTATTTGACT 1995
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1996 AGAACTCAAGCAGAATAGGAATTTATGCTTGTTTTATATTCAATAATAATTTTGAAGATACAGTTGTTTTATTA 2069
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2070 CACCAAAAATACTATATTAATCTTATTTAACTAAGTTTTATCCAAATCATGTTAACTTAAGAAACATTTGATCA 2143
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2144 GTTCCTATATTTCTAGGAGTTTGGTGAATATTTATTTATAAATGCTTATTTTTTTCCAAGCCAAGTTAGAATAG 2217
Query 391 --------------------------------------- 390
Sbjct 2218 AGCACTTTTAGAGGATTTCATAAATGAATTTTGCAATGC 2256
