Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10514
Subject:
NR_033708.1
Aligned Length:
4077
Identities:
603
Gaps:
3474

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTTGTTGCGGGATCTCACAGGCTTTAAACCGCGGCGCCGCGGCGCCCGGGTGTGGATCCCTAGATGGGAGCCGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGATGGGCCGGGTGCCTGGTGGGTGGCAGTCGGGGCTGACGGCGGCGGCACTTTGCCGCCTCAGGCCCTGGACA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCTTCACCCCGCCGCCTGCCCAGGCGGGCCGGCCCTGCCCGTCCACCGGCCGCCGAGAGTCCCCGGCCTTGGGT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCCCGGGGCCGCTGACTGGCCTCGGTCACCTCCCGGGGAAGGCTCCCGCGCCTCCATCTGCCCCCGCAGGAAGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GACCCTCTTCTCGCCCGCGAGGCTTCTCCGGGTGGGATCGTCCTGGCCCCCAGCCCTAAGGGATCCGCCCCCTC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CGAGCATCCGCCGCCCCTCGGAGACCACTCCAGCTCGGACGGACCCACTCCAGCCCCCGCTGCACGCGGAAGCG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTCATCCTCCCCGCCTGCCCCGTTCCCTCCCCCTTCTCCTGTGGGACAACCAGGGACCGCAGCTCCCCGCTCCC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CAGGTGTGGGGGCTCCGACACGAACGCCTCTGCTCGCAGGGCGGTGAGCGCAGATCCCACGGGTCCCTCGGTCG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGGGTCGAGGCTGCTTCCGTTTCCATCCCGGACCCGACAATGGGCGGGAAAAAGAAGGCTTTACACGACTACGC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGCGGAGTTCACCGACCTGGTGGTGAAGCACCTGATTGAGCACAGTGACTCTGGGGACACGTCTGTGGTGGAGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCCTTTACTGCAGGGCCTGCGAGCTGCCCGTGCGCGTGCGGAGGGACCGCATCCTGGAACACCTGTCCTCGGGC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AGGCAGCACGGCCTGCGGACGCCCATTCTCATGTAAATGTCAGTGCCAACGCTGGTGTTTCAGGAGTCATCCCA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GCGGGCTGCGGGCTATTTTAGGATTCTCTGCCCTGCAAACGTTTCCAAAGTACGTGGACAGGCCGCCTGATGAC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  ACTACGTTTACGGGATCTGCTAGTGGCTTGCCTACTTAGGGAGTAAACCCTGTGAAGTCTCGCAGTTTTGTTAA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGTGTGCGTGGCCACCTGAATGCTGCCTTATCACAAGCCAGATACATACTGGTCTGTAGGGTAACTCCCCACTG  1110

Query    1  ------------------------------------------------------------ATGTGTCTTTTGTC  14
                                                                        ||||||||||||||
Sbjct 1111  TTGATCCTCTGAGATGATTGTGGACTGGGTGCTGTGAGTCCTGCCACTTTGTTTAAGTGAATGTGTCTTTTGTC  1184

Query   15  CAGCTCAGCCGCCTCGGATCTCGCTGCCACCAGCCTTACTGCACACCCGTGCCACCCGCCCTTGCCCCGTCAGC  88
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CAGCTCAGCCGCCTCGGATCTCGCTGCCACCAGCCTTACTGCACACCCGTGCCACCCGCCCTTGCCCCGTCAGC  1258

Query   89  CTCAGCCTCAGCTCATTCTCTCAGGCAGTCCCAGCATTGGCACGGTACCTCCTCCCGCTGTGGGCCACACGTCT  162
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CTCAGCCTCAGCTCATTCTCTCAGGCAGTCCCAGCATTGGCACGGTACCTCCTCCCGCTGTGGGCCACACGTCT  1332

Query  163  CTGCTCCCTGTCAACCCTCCTGCCATCAGCACCACCACCAGCGACTTGTCTGCCCGGGAGGATGCAACACCATC  236
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CTGCTCCCTGTCAACCCTCCTGCCATCAGCACCACCACCAGCGACTTGTCTGCCCGGGAGGATGCAACACCATC  1406

Query  237  TGCCTCCACCGGCCACCTTTCAGTGTTTCCTGCTTTCCAAGTAAAGATACCAGCAGTGCCCTCAGAGCAGACCA  310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TGCCTCCACCGGCCACCTTTCAGTGTTTCCTGCTTTCCAAGTAAAGATACCAGCAGTGCCCTCAGAGCAGACCA  1480

Query  311  GCCAGAGTTTTTCTGAAGCCTCCCACAGGGTGCTCCCCGGAGGAGGCCCGAGATGCTCTCGTGACTTTGGAGCC  384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  GCCAGAGTTTTTCTGAAGCCTCCCACAGGGTGCTCCCCGGAGGAGGCCCGAGATGCTCTCGTGACTTTGGAGCC  1554

Query  385  GGGGTGGCTGGCCACCTTGGCCTGGGCATCTTTGGGGTGGGCTTCGGGAGCCCGGCACTGCTGCAGAGTGTGGT  458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  GGGGTGGCTGGCCACCTTGGCCTGGGCATCTTTGGGGTGGGCTTCGGGAGCCCGGCACTGCTGCAGAGTGTGGT  1628

Query  459  GGATGAGAACAGCTGCTGCTTGCTGTACGTGGTGGAGGACCAGCTGTGTGATGTGGAGCAAGCCTTCAGAGCTG  532
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GGATGAGAACAGCTGCTGCTTGCTGTACGTGGTGGAGGACCAGCTGTGTGATGTGGAGCAAGCCTTCAGAGCTG  1702

Query  533  AGCATTTGGGCCAACACCAGAGTGGTTCGGGAACAGGATGCAGACATTGTCCTCAACGACCAGCGGCACTT---  603
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct 1703  AGCATTTGGGCCAACACCAGAGTGGTTCGGGAACAGGATGCAGACATTGTCCTCAACGACCAGCGGCACTTTGA  1776

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 1777  TCCGGTTTTCCAGTTCTTGCACAAGCAAGTTTGTGTCAGCCACGCCCTGGGGAGGATCCACTGGATCACCGCCG  1850

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 1851  TCACTGCCTGTTCCCGGCGGCCTCTCCGGCTTCCCTAAAGAGAGCAGCTTCCCTCGAGACCAGAAGCCAGAGCT  1924

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 1925  CACCCTCCCTTGTGTCCAGGTGGGACTTTCTACAACGCTGCTGTGCACGACGTGGATGCCGTATGCATGTTGCT  1998

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 1999  GGGGGAAGCCACTCCGGACACTGTGTTTTCTCTGGGACATGTCTTCTGCCCAGATATGGCCGCCTTAAAAGATG  2072

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 2073  CAGATGCTGTTGTGATCAGCATGAAGTTTCCCTGTGAGGCCGTGGTTAGCGTGGACATCAGCCAGCACTGCACA  2146

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 2147  GACAGCTGCGACCAGGACGTCAGCCAGCACTGCACAGACAGCTGCGACCAGAGACTGGAGATGGAGTCTTGCCC  2220

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 2221  TGTCACCCAGGCTGGAGTGCAATGGTGCGATCTCGGCTCACTGCAACCTCCGTCTCCCAGGTTCAAGCGATTCT  2294

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 2295  TCTGCCTCAGCCTTCTGAGTAGCTGGGATTACACGCGTGTGCCACCACGCTCGGCTAATTTTTGTATTTTTAGT  2368

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 2369  AGAGATGGGATTTCACCATGTTGGCCAGGCTGGTCTCGAACTACTGACCTCGTGATCCACCTGCCATGGCCTCC  2442

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 2443  CAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCTCGGCCTAAAAAACAATTTTCTTGAAGAATCCGATTTTG  2516

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 2517  TGCATAGTAATGACACAGCACCATTCCTGAGAAATAGGAAATATATGTGTGTGGTATGAAAAGCCCATATTCTG  2590

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 2591  TTCTTGTCACCTGAATCTAGGCTTCCTCTTTGGATGTGAACGCGGGAATGAACAGTGGCTGTTTTCCACCCAAA  2664

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 2665  GGGGCGTGGAGACCTTTTGGAAACGGGCTTTCTCCTTTCCATTTTGCAGCCGGGGGCGGGTGGAAACCTTCCTT  2738

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 2739  CGAAGGGTAGTGCCTTGGGGAGCAGCAGACCTGCTCTGAGTCCAGCTTAGCTTTCCAAAATTCTGTGTGGAACT  2812

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 2813  TACTGGAGATGTTTTTATATATTTGAAAATAATGGCCTGTATTTCTCACGCTATACTTAAAAAAAATAACTAAC  2886

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 2887  CTTTTAAACAAAGATATTCAAACTCACCCTTGTGCTGAAAGCACTCACATTTCTGTGTTCATTCCTGAAAGGGC  2960

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 2961  GTTTTAGAGTCCCCGTTTCTACGTTCTATGTGGCACCCTCTTGCCGAGGGAACATCCAGAATCCCTCCACTTCC  3034

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 3035  TGTCTAGTTTGAGGCCTCAACACCTTCATGATCCAGAGTCCTGCGGCTATGAGGGGGTGGGCCCACCACCGCCC  3108

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 3109  AGCCCTCCTTGGTGGACGTGGGGACAGGTAGGAGCCTAGGGAAAGGGGTGGGCGGGCTCTGGTGTGACGGCGTG  3182

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 3183  AGCGCTAGCCAGGAAGATGGGGCCAGGGCTTGGCATGGCACCTCACCTGTGGGGGAACTCGGCGGAGCTTCCTG  3256

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 3257  GCGGCATCTCCCCCTCTTGCCTTGGTCCTTTCTATCTTTGTTTTAGGCCAATTTCTAAAAAGACTGAGGCCTCC  3330

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 3331  TTCAAGGTTGAACAGATTTCTAGAGCCTTGTTTTTGCTGTGACAAGTCCCTAGTCCCTGTTCACAACTCTGAAA  3404

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 3405  CCAAGAAACCTGAGAACCAAGAGAACTGAAATGAAGCCCGTTGGTCTCAGCCTGGCTTGAGCCAACATGAGGCT  3478

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 3479  CTCTGCTGCCTTTTGTTTTCTTAGGTTTTGCTGAGAAACGGGAGTGCGTTCTGTGTCGGTGTTTGTGACGCCCT  3552

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 3553  GAGACCCTGCTTGGCCTAGCTAAAGTCCAGAAGGCCTGGGCCCCACAGGGCTTGGATGAGGGCTCATGGGCCTG  3626

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 3627  TACTTCAGGAGGCCTGAGAGGCCCGGTCAGTCCCATGAGGCTACTCGGCTTGGCCCGCAGGTCCTCCGAGGCAC  3700

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 3701  AGGGCAGAGGGACACCCCAGGGACCCATCAGACTCACGACACAGAGAAACTCAAGTGGGGTGCCAGGGCCGGCC  3774

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 3775  ACAGAGGCCACGGGCTTCCTGCCTGTGAGGAGCCGCCCTGTTTGTCTGAGCCCTTTGGAGATTTAGGTTGAGTC  3848

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 3849  ATGAGAACCGGTCATTGGAACATACACTTTATTATGTTACAAAAACAAAAATCCCCACTGAAACACAGCTAAAA  3922

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 3923  AAATAACACATTTTCCCAAGATTACATTACCAAAAACAGTTGTTATGTCATTGGAGGGCGTCCATTAATACTGC  3996

Query  604  --------------------------------------------------------------------------  603
                                                                                      
Sbjct 3997  TCGGAGAAGCACGATCTTACACGAAAAACACGGATGGGATTTCGTTTTCACCTTAAAGCATTAAAGTGCTTTAA  4070

Query  604  -------  603
                   
Sbjct 4071  CTGGTAA  4077

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