Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10552
Subject:
NR_024330.1
Aligned Length:
2017
Identities:
632
Gaps:
1384

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CAACCACACACCTGGGGAATTGCTGGCCTGACTTCTGACCCCTGACTCCTCATACCCTTCCTCCAGAGCATGAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ATTTGACCACCAACTGAAACCTGACCTCTGACCCCAGACCACTGGCCCTTCCCCCGCCCTGTGGTGACTTCATA  148

Query    1  ---------------------------------------ATGGCCCTGCTGGCTCTGGCCAGTGCCGTCCCGTC  35
                                                   |||||||||||||||||||||||||||||||||||
Sbjct  149  AAGGTTACTAGCTTCTCCCCTGGCCTTGAGACCCACACGATGGCCCTGCTGGCTCTGGCCAGTGCCGTCCCGTC  222

Query   36  TGCCCTGCTGGCNCTGGCTGTCTTCAGGGTGCCCGCCTGGGCCTGTCTCCTCTGCTTCACAACCTACTCTGAGC  109
            ||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TGCCCTGCTGGCCCTGGCTGTCTTCAGGGTGCCCGCCTGGGCCTGTCTCCTCTGCTTCACAACCTACTCTGAGC  296

Query  110  GCCTCCGCATCTGCCAGATGTTTGTTGGGATGCGGAGCCCCAAGCTTGAAGAGTGTGAGGAGGCCTTCACGGCC  183
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GCCTCCGCATCTGCCAGATGTTTGTTGGGATGCGGAGCCCCAAGCTTGAAGAGTGTGAGGAGGCCTTCACGGCC  370

Query  184  GCCTTCCAGGGCCTCTCTGACACCGAAATCAGTGAGGAGACCATCCACACTTCATCAGTGTCCTGGGGAAGGTG  257
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GCCTTCCAGGGCCTCTCTGACACCGAAATCAGTGAGGAGACCATCCACACTTCATCAGTGTCCTGGGGAAGGTG  444

Query  258  CAGAGGGAGGGCAGGAGAGGCCCAGAGGGTCAGGCTGAGGGACAGACAGAGAGAAACAGTCAGAGGAGAAAGGC  331
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CAGAGGGAGGGCAGGAGAGGCCCAGAGGGTCAGGCTGAGGGACAGACAGAGAGAAACAGTCAGAGGAGAAAGGC  518

Query  332  TCAAAGACCATGAGAACAACAGAGACTTAGGGACAGAGAGACACAGACAGGGGAAGACAGCAGGGCAAAGACTC  405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TCAAAGACCATGAGAACAACAGAGACTTAGGGACAGAGAGACACAGACAGGGGAAGACAGCAGGGCAAAGACTC  592

Query  406  AGAGAGGGGAGGATGGAGAGTCAGAGAGGGGAAGATGGAGACTCAGAGAGGGGGAGGATGGAGACTCAGAGAGA  479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AGAGAGGGGAGGATGGAGAGTCAGAGAGGGGAAGATGGAGACTCAGAGAGGGGGAGGATGGAGACTCAGAGAGA  666

Query  480  GAGGAAGATGGAGACTCGGAAAGATGGAGACTCAGGAGTATGGAGAGTCAGAGAGGGGAGGATGGACACTCGGG  553
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GAGGAAGATGGAGACTCGGAAAGATGGAGACTCAGGAGTATGGAGAGTCAGAGAGGGGAGGATGGACACTCGGG  740

Query  554  AGGATGGAGAGTCAGGAGGATGGAGACTCATAGAAAGGGGAGGATGGAGAGTCAGGAGAGGTTGGAGACTGGAG  627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AGGATGGAGAGTCAGGAGGATGGAGACTCATAGAAAGGGGAGGATGGAGAGTCAGGAGAGGTTGGAGACTGGAG  814

Query  628  AGGGAA--------------------------------------------------------------------  633
            ||||||                                                                    
Sbjct  815  AGGGAATAGAGACCCAGAGAGGGGAGGATGGAGACTCAGAGGGTGGAAGATGGAGACTCAAAGAGGATGGAAAC  888

Query  634  --------------------------------------------------------------------------  633
                                                                                      
Sbjct  889  CCAGAGAGAGGAGGACAGAGATGAGGCAGAGACTAGGGGAAGCAGGATAGCGACTGGTCGGGGGCAGAGACTCA  962

Query  634  --------------------------------------------------------------------------  633
                                                                                      
Sbjct  963  GGGAGGATAGAGACTTGGGAGGGACTCAGGAAGCATAGCGACTGTGGGGCAAAGAGTCAGAGAGGGGAGGATAC  1036

Query  634  --------------------------------------------------------------------------  633
                                                                                      
Sbjct 1037  AGACTTGGGAGGGCAGAGACTCAGAAACAGAATGTTCGCATTAGGGACATGGTGTTGCGGGGAGCTGCCTCCCC  1110

Query  634  --------------------------------------------------------------------------  633
                                                                                      
Sbjct 1111  CAGCCCCTGCTCCCTCCCTCACCGCCAGACTATGATGAGAGAAGCCACCTGCATGACACCTTCACCCAGATGAC  1184

Query  634  --------------------------------------------------------------------------  633
                                                                                      
Sbjct 1185  CCATGCCCTGCAGGAGCTGGCTGCTGCCCAGGGATCCTTTGAGGTTGCCTTCCCTGATGCTGCGGAGAAAATGA  1258

Query  634  --------------------------------------------------------------------------  633
                                                                                      
Sbjct 1259  AGAAGGTCATTACACAGCTTAAAGAAGCCCAGGCTTGCATCCCTCCCTGCGGTCTCCAGGAGTTCGCCCGGCGT  1332

Query  634  --------------------------------------------------------------------------  633
                                                                                      
Sbjct 1333  TTCCTCTGCAGCGGGTGCTACTCTAGGGTCTGCGACCTCCCGCTGGACTGCCCAGTTCAGGATGTGACAGTGAC  1406

Query  634  --------------------------------------------------------------------------  633
                                                                                      
Sbjct 1407  TCGGGGCGACCAGGCTATGTTTTCTTGCATCGTAAACTTCCAGCTGCCAAAGGAGGAGATCACCTATTCCTGGA  1480

Query  634  --------------------------------------------------------------------------  633
                                                                                      
Sbjct 1481  AGTTCGCAGGAGGAGCTCCGGACTCAGGACTTGTCCTATTTCCGAGATATGCCGCGGGCCGAAGGATACCTGGC  1554

Query  634  --------------------------------------------------------------------------  633
                                                                                      
Sbjct 1555  GCGGATCCGGCCGGCTCAGCTCACGCACCGCGGGACGTTCTCCTGCGTGATCAAGCAAGACCAGCGCCCCCTGG  1628

Query  634  --------------------------------------------------------------------------  633
                                                                                      
Sbjct 1629  CCCGGCTCTACTTCTTTCTTAACGTGACGGGCCCGCCCCCGCGGGCGGAGACAGAGTTGCAGGCCTCGTTCCGG  1702

Query  634  --------------------------------------------------------------------------  633
                                                                                      
Sbjct 1703  GAAGTGCTGCGCTGGGCGCCGCGGGATGCCGAGCTGATCGAGCCCTGGAGGCCCAGCCTGGGCGAGCTGCTGGC  1776

Query  634  --------------------------------------------------------------------------  633
                                                                                      
Sbjct 1777  CAGGCCCGAGGCTCTGACGCCCAGCAATCTGTTCCTGCTTGCAGTCCTCGGGGCCCTCGCATCAGCGAGTGCGA  1850

Query  634  --------------------------------------------------------------------------  633
                                                                                      
Sbjct 1851  CAGTGTTGGCGTGGATGTTCTTTCGATGGTACTGCAGTGGCAACTAACAAAGGTATCTTTCCTCCTTCCCTATC  1924

Query  634  --------------------------------------------------------------------------  633
                                                                                      
Sbjct 1925  CTATTTCCATCCTGAAAATAAAGAATATATTTCAACTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  1998

Query  634  -------------------  633
                               
Sbjct 1999  AAAAAAAAAAAAAAAAAAA  2017

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