Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10619
- Subject:
- XR_002956447.1
- Aligned Length:
- 3948
- Identities:
- 200
- Gaps:
- 3730
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTGTATTCCGAGCCTTGGTGTCTGGCGGTTTCCGAGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGGTTTCCGACCGTTGGTGTCTGGCGGTTTCCGACCGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGCGCCATGCCGATGTACCAGACAAGAAGACAAGAAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAAGCAGCAAAACGACCACTGAAAACAACGCCGGTGGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAAATATCCAAAGAAAGGGTCCCAAGCGGTACATCGTCATAGCCGGAAACAGTCAGAGCCACCAGCCAATGATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTTTCAATGCTGCGAAAGCTGCCAAAAGTGACATGCAGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAAGGGCTGTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTCCATGATCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAACAAAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CGCAGTCTTCTCCAGGCTGACAAGGCGAAGGGCATGGCTTCGAAGTGCAAAAGAGTCATCATGAAACATCATGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATCATGAATCATTAGGCGTCTTCCCTTCGCTCCCCACTTTTTTTTTTTTTTTTTTGAGACTGAGTCTCGCTCTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTGCCCAGGCTGGAGTACAGTGGTGCGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGCCGTAGCCTCCTGAGTAGCTGGGATTACAGGTCCCCGCCACCACACCTGGCTAATTTTCTTATTTATTTATT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TATTTTTAGTAGAGATGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCACCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCTTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTAAGCCATTGCACCCAACTCACTCCCCACCTTAAAACCAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAGCGCTCTGGCTCTCAATGGAGACATCAAGCCCTCCCTGCCCCTTCTCCCTCCCCTTTCAGAGAATCTCCAGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AATTTCTGCCATTGTGCAGGGAGCAATTGAAAAATCAGTTAGTTCAGCTGGGTGCAGTGGCTCATGTCTGTAAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCCAGCACTTTGGGAGGCTGAGGCGGGCAGATCACCTGAGGCCAGGAGTTGGAGACCAGCCTGGCCAGCACAGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGATGGGCACCTGTAATCCCAGCTACTCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGTGGAGCTTGCAGTGAGCCGAGACTGCAGCATTGCACT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCAGCCTGCGCAACAAGAGTGAAACTGTCTCAAAAAACAAAACAAAACAAAACACAAAAAGAAAGAAAAAAGGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AAAATCAGTTAGTTCGATTATTAGAAGACTAGATTATTGCTCAGCAGTAACCACTCCTTTCCCACAAACTCCCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCTCTAGGAGGAATGTACCTCCCCACCCATTCCTGTTAGGCTTGGCCAGGTGAATCGCTTTGGCCAATAGAATG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TAACTGACAAGGTGAGCAGAGATTTGCAGTGGGCTTGTGCTTGGTGCTGGTCCTCCGGGGCTCCTGCCTTTAGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CAGGGGAAGCACACTCCCCAGCCCCTCCTTAGCCCTCTGGCCCTGGGGAGAATGAGAGGCATGTGGCACAGTCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGGACCCAGCCGTGGCTGGGAGCAAGCCTGGAAGCTTGAGCGAGAGATAAATGCTTGGTCTTTTTGTTTGAGAC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TAAGTCTCGCTCTATCGCCCAGGCTGGAGTGCAGTGTGGCACAATCTCAGCTCATTGCAACCTCCACCTCCCAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GTTCAAGCTATTCTCCTGCTTCAGCCTCCCAAGTAGCTGGGACTACAGCCAAATTGGAAGACCCACTTCTCTGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ACTGGATGCTGCATTGAATTGAGCAAAGGAACTGAGTGCCCGGGGAGCTCAAAGGGAAGCAGCCCAGCCTTCCT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TCCGGGGCAGAGCAGTGGTGGGGACCTGTTTCCAGCTGCTTGTGCCCCCCACTTCATGGAGGAGGGACCAGGGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCCTCAGAGGAGAGGGTGATGTTTGACAGTGGCTGCCTGCCCTGAAAATCGCCCTTGTCTGTCCAGCCTGGCCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GAATTTCACCCACATCAACCCACATGGGATACTTTATTTATTTATTTATCTATTTATTTATTTATTTATTTATT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTAGAGCCAGGGTCTCACCCTGTGGCCCAGGCTGGAGTGCCGTGGTGCTATCATAGCTCACTGCAGCCTCAAAC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCCTGGGCTCAAGTGATCCTCCCGCCTCAGCCTCCAGAGTAGCTGGGACTACAGGAACACACCACTGTGCCTGG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTTATTTTTCTTTTTTTTTTTGGTAGAGATGGGGGTCTCTCTATGTTGCCCAGGCTGGTCTCAAACTCCTGGCC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TCAAGTGATCCTCCTGCCTCGGCCTCCCAAAGTACTGGGATTACAGAATCGGCTCCCAGACACCTGCCACTCGT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GAATGCATCTGATAAACTCACTCACACTGAGGCCTTGGGGACTGAGAGTGCGATGACATGGATCCTGCGGACAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ACCGCCCCAGGGCGTACCTAGCACCGAAGCATCAGGCGCCACTAGGTCTCCAGCTCCTTCTCGGATGACGTCCT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TCAGCACGCCCCGGTCCCCCGAGATGTCCAGCATCCTCTGACTTAACCGCTCGTACAGGGACTGATGGAGAATG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AAAGCCAGGCCTCAGAGCCGCAGACCCACCCGGCCACCCCTCAGCGTCTACGCCCCCACGTCTGGGCCCTCACC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TGGCCGGGGGCGTCGTCCCCTTCCAGGACTCCCTGGTTTAACGCGCTTCCCCCCATGTCCTAGCTGCCCTCCCT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GTGGCGTGAGCCTTCGGCCTGGTGCGCCCCGCTGCCCTTCCTGGCTGTGACTCTGGTGGGGTTCCGAAGGCCCC 3034
Query 1 ---ATGCCCGGCAGACCCCTACCGACGGCGGCATTCCATTCTGGGGCCACGAGGAGGCACTCATCGTTTCGTTC 71
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 TTTATGCCCGGCAGACCCCTACCGACGGCGGCATTCCATTCTGGGGCCACGAGGAGGCACTCATCGTTTCGTTC 3108
Query 72 CAACCGCCGCCAACGGCCCTGGCCCTCGCGAGCTCTGGAACTACAGAGGTCGCACG---------GTGAGTTGC 136
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| .|||| .|
Sbjct 3109 CAACCGCCGCCAACGGCCCTGGCCCTCGCGAGCTCTGGAACTACAGAGGTCGCACGAGGCTCGCTCTGAG--CC 3180
Query 137 CAGG-TG-----------TGGCCCGTAATCGGAGC-----------------------GCACAAAACAT----- 170
|||| || ||| |||..||| ||.|||.|.||
Sbjct 3181 CAGGCTGGAGTTCAGTGATGG------ATCTCAGCTCACTGCAGCCGCCACCTCCTGGGCTCAAGAGATCCTCC 3248
Query 171 -------------------GATGGG-----ACACGTAACGGGACCACACAGGGCACATTGGGC----------- 209
|.|||| |.|||| |.||||| || |||.|| ||
Sbjct 3249 TGCCTCGGCCTCCCAAGTAGCTGGGATTACAGACGT----GCACCAC-CA-GGCCCA----GCTAATTTATTTT 3312
Query 210 ----------ACTTGCAGG---------------------GGCGCGAGG---------------TGGCGGCACG 237
|.||||.|| .|| |.||| ||||..||.|
Sbjct 3313 TTAGTTTTTAATTTGCTGGTAAGATGGTTTGTAGCTTTGTTGC-CTAGGCTGGTCTTGAACTCCTGGCTTCAAG 3385
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3386 CGATCCTCCAGTCTTGACCTCCCAAAGTGCTGGGATTATAGGCGTAGGCTACAGCCAACTTTCAATACTGCCCC 3459
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3460 ATTGGGGGTTACGTTTCCAACACATGAAATTAGGAGGATACATTCAAACCACAGCAGTATATTATGACCATAAT 3533
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3534 ATTCATTAACTGTGTAACAGGCTGGGCGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGACCAGAGTGG 3607
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3608 GTAGATCACTCGAGGTCAGGAGTTTGAGACCAGCCTGGCCCACATGATGAAACCGCCTCTCTACTAAAAATACA 3681
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3682 AAAAATTAGCCGGTGTGGTGGCAGGCGCCTGTAACCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGA 3755
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3756 ATCCGGGAGGTGGAGGTGGCAGTGAGCCTGATTGCACCACTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCT 3829
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3830 GTCTCAATAAACAAACAAACAAACAAAACCTGTATAACAGAGTGTCATTGAATTTCTAAACGTTGAAAGACTTC 3903
Query 238 -------------------------- 237
Sbjct 3904 ACATTAAAAAAAAACTCACAATTTAA 3929
