Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10630
Subject:
XM_006711262.3
Aligned Length:
2598
Identities:
515
Gaps:
2040

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCATTTTTCAGAAATTTCCAACAGAATCTGCCTTCAGTGTCCTCTCTAGTAGACACAATCAGTAGTGCTGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGAGGATTTGACCACTGCTGTTGGGGAGGTCAGCTATGCTTTAACTGACTCAGTTGCTGAGCAGGTAACAAGTA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGATGAGTGGCTTTCGCCCAGAAGAGGAAAGCTCTGTAGCAGAAGAAGCTGTAGACACTTCTAAACAAAAAAAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCCGGGTTAACAGAAGTCTCCAAAAACACTAATTGTCAGAAAACACAAGCCAATTTAGAGCATAGAGCAAAGCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AATAAATACTTGTAAAACTTCACTAAAGCAAGATCAAGGAATACATGAAGAAAGAGTATTTAAACATGTTAATG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATAGGCAACAAACTCTATCAGAATATCAAGACACTGGTAATACTGGTGATTCTTCTTTGAAAGGCTACATGAAT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AATGGTGGGATATCAGTTATCAGACAGAATACAAGGGCTGGATCTATTTGTCAAGAACTTGAAAGTACTGACAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ATGTAAAACAATTGGAGTAGGAATTTCCAATAATGGTAAGAATGATTTAAAGGAGGTAGGATATCAAGAAATGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AAGGAAATCAGAAGAATGCCAACGGAATAAACAAATTGTATGAGCAAAAGAAATATGTTGGTACAGATAATTGT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AAAAAGGAGGAATATTCTAAATCTCGACATGTATATTTGGGAAGAGATCAAGAGAATATGGGGCATTTCAATAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ATGTAAACATCTTCCCGATTTAGGGCATTCAGATCATTTAAAGAAAGCTGAAAAATGTGTTAAAAGTAAAGCAT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CCAAAGGGAATGAGTGTTCAGGAAATGAATGTTCTTTAAAAGATATTTTGACAAGCAATAGGCATATGACACAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AAATCTATTATAAAAGAAGACATACATCCAGCACCATCAACTAATTCTAAAGATAAGTTATCTGGGAAAATTGA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGAACAAATAAATTCAACGAAATACTGTAAAGTGAACGAAGACATAAAACCAAAGAAAACTGAGGCCATTTCTG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CCAAGAAAGGAACAGCAAAGAGTAAAGATGAAAAATATTCTAAGATAATACCAGAAAAAGATAATTCCTACATG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GACAAAGATGAGCATGGTTCATCCTCTGAAAGTGAAGATGAAGCGCTGGGTAAATATCATGAGGCCTTATCCAG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  AACACACAATTCCAGACTACCACTGGCAGATTCTAGACAAAGGAACTATGCTTGGGAAACAAGGCAGAAATACA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GTCCTCTATCGGCAGAGTATGATGGATACAGTAGTGAAGCATCAATAGATGAAGGAAACTGCATTCAGAGAATG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  AGAAGAACACCCCCGCTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTGTCATG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TACACCCTCAGAAATTGGGGACAGTAAATGTGAATTTTCCCACTGCAGCAACAGTCCAAGATGCTCATATAACA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  AGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAAGTTTTCATAATAAAGGATATGAAGAAGATGTTCCA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AGTGACAGCACTGCAGTCCTGAGCCCTGAAGATATGTCAGCTCAAGGATCATCTTCGCAGCTTCCTAAACCTTT  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TGATCCTGAGCCAGAAGCTAAATATGGCACACTGGATGTGACTTTTGACTATGACTCACAAGAACAGAAGCTTC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TGGTAACAGTGACAGCTGTCACAGACATCCCAACATATAACAGGACAGGTGGCAACTCATGGCAAGTACACCTT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GTTCTTCTACCTATAAAGAAACAGAGAGCAAAAACCAGCATCCAGAGAGGACCATGCCCTGTCTTCACAGAAAC  1850

Query    1  --------------ATGTTGGA---GGGCT------------TCCAGATCTTGGTTCAGA----ATACAGTACA  41
                          ||||||.|   |.|.|            |.|||.||  ||||.|||    ||...|||||
Sbjct 1851  ATTTAAATTTAATCATGTTGAATCTGAGATGATTGGAAATTATGCAGTTC--GGTTTAGACTGTATGGTGTACA  1922

Query   42  ----AGGAACAA-------------------------------TTCACAAGAT--------------AAAATG-  65
                |.|||.||                               ||.||||.||              |||||| 
Sbjct 1923  TCGCATGAAAAAAGAAAAGATTGTGGGGGAAAAGATTTTTTATTTAACAAAATTGAATCTTCAAGGGAAAATGT  1996

Query   66  -------------------------------------TGTCTGTGACTCCCAAATGAGTGTGTCAGAAATGTCT  102
                                                 ||.||||||||||||||||||.||||||||||||||.
Sbjct 1997  CATTGCCTGTGATATTGGAACCTTCTTACAATCATTCTGGCTGTGACTCCCAAATGAGCGTGTCAGAAATGTCG  2070

Query  103  TGTAGTGAAAGTACATCCGCATGTCAGTCTCTCGAAGACGGGTCAGTTCCAGAAATTCTCATTAGCCTGCTTTA  176
            ||||||||||||||||||.|||||||||||||.|||.|.||.|||||||||||||||||.|||.||||||||||
Sbjct 2071  TGTAGTGAAAGTACATCCTCATGTCAGTCTCTTGAACATGGCTCAGTTCCAGAAATTCTTATTGGCCTGCTTTA  2144

Query  177  TAATGCCACAAATGGGAGACTATCAGCAGAAGTGATAAAAGGCAGCCACTTAAAAAATTGGGCAGCAAACAGAC  250
            |||||||||||.|||.|||||||||||||||||||||||||||||||||||.|||||||.||||||||||||||
Sbjct 2145  TAATGCCACAACTGGAAGACTATCAGCAGAAGTGATAAAAGGCAGCCACTTCAAAAATTTGGCAGCAAACAGAC  2218

Query  251  CACCCA---------------------------------------------------------ATACATATGTT  267
            ||||||                                                         |||||||||||
Sbjct 2219  CACCCAATGGACTGTTCTGTTGTCTAAAACACTTGATAGGTGGACAGGTTTATATAATCCGAGATACATATGTT  2292

Query  268  AAGTTAACTCTACGGAAATCCACGGATCAAGAGATGTCCAAATGCAAGATATCCATCCGCAGAGGGCGGCCAAA  341
            |||||||||||||.|||.||||.||.|||||||||||||||||||||||.|||||||||||||||||.||||||
Sbjct 2293  AAGTTAACTCTACTGAATTCCATGGGTCAAGAGATGTCCAAATGCAAGACATCCATCCGCAGAGGGCAGCCAAA  2366

Query  342  TCCAGTATACAAGGAAACTTTTGT-TTTCAAAGTGACCCTATTTCAGCTTTCTCATGTGACACTCATGCTGTCT  414
            |||||||||.|||||||||||||| |||| |||||.|||||||||||||||||.|||||||||||||.||||||
Sbjct 2367  TCCAGTATATAAGGAAACTTTTGTCTTTC-AAGTGGCCCTATTTCAGCTTTCTGATGTGACACTCATACTGTCT  2439

Query  415  GTGTATAACAAAAGCAGCATGAGAAGAA---AGATGATAGGCTGGATTTATTTAGGTCTCAACAGCTCTGG---  482
            ||||||||||||.|||||||||.|||||   ||||||||||||||||||.|||||||||||||||||||||   
Sbjct 2440  GTGTATAACAAACGCAGCATGAAAAGAAAAGAGATGATAGGCTGGATTTCTTTAGGTCTCAACAGCTCTGGAGA  2513

Query  483  AGAAGAACTCAATCACTGGACTGAAATGAAAGAGTCAAAAGGACGGCAAGTACGTAGATGGCAGGCGTTGCTAG  556
            ||||||||||||||||||||||||||||||||||||||||||||.|||||||.||||||||||.||||||||||
Sbjct 2514  AGAAGAACTCAATCACTGGACTGAAATGAAAGAGTCAAAAGGACAGCAAGTATGTAGATGGCATGCGTTGCTAG  2587

Query  557  AGTCACGA  564
            |||||   
Sbjct 2588  AGTCA---  2592

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