Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10630
- Subject:
- XM_017000934.2
- Aligned Length:
- 1614
- Identities:
- 515
- Gaps:
- 1056
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGCTCCTTTTTCTCTATATTAATAAGAAGTTCTGTTTTGAAAATGTTGGCGGGTTTCCAGATCTTGGTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAATACAGTACAAGGAAGAATTCACAAGATAAAATTTATAATTCCTACATGGACAAAGATGAGCATGGTTCAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTCTGAAAGTGAAGATGAAGCGCTGGGTAAATATCATGAGGCCTTATCCAGAACACACAATTCCAGACTACCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGGCAGATTCTAGACAAAGGAACTATGCTTGGGAAACAAGGCAGAAATACAGTCCTCTATCGGCAGAGTATGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGATACAGTAGTGAAGCATCAATAGATGAAGGAAACTGCATTCAGAGAATGAGAAGAACACCCCCGCTGGATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTGTCATGTACACCCTCAGAAATTGGGGAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGTAAATGTGAATTTTCCCACTGCAGCAACAGTCCAAGATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGTCATGAAATAGAAAGTTTTCATAATAAAGGATATGAAGAAGATGTTCCAAGTGACAGCACTGCAGTCCTGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCCTGAAGATATGTCAGCTCAAGGATCATCTTCGCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TATGGCACACTGGATGTGACTTTTGACTATGACTCACAAGAACAGAAGCTTCTGGTAACAGTGACAGCTGTCAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGACATCCCAACATATAACAGGACAGGTGGCAACTCATGGCAAGTACACCTTGTTCTTCTACCTATAAAGAAAC 814
Query 1 ------------------------------------------------------------------ATGTTGGA 8
||||||.|
Sbjct 815 AGAGAGCAAAAACCAGCATCCAGAGAGGACCATGCCCTGTCTTCACAGAAACATTTAAATTTAATCATGTTGAA 888
Query 9 ---GGGCT------------TCCAGATCTTGGTTCAGA----ATACAGTACA----AGGAACAA---------- 49
|.|.| |.|||.|| ||||.||| ||...||||| |.|||.||
Sbjct 889 TCTGAGATGATTGGAAATTATGCAGTTC--GGTTTAGACTGTATGGTGTACATCGCATGAAAAAAGAAAAGATT 960
Query 50 ---------------------TTCACAAGAT--------------AAAATG----------------------- 65
||.||||.|| ||||||
Sbjct 961 GTGGGGGAAAAGATTTTTTATTTAACAAAATTGAATCTTCAAGGGAAAATGTCATTGCCTGTGATATTGGAACC 1034
Query 66 ---------------TGTCTGTGACTCCCAAATGAGTGTGTCAGAAATGTCTTGTAGTGAAAGTACATCCGCAT 124
||.||||||||||||||||||.||||||||||||||.||||||||||||||||||.|||
Sbjct 1035 TTCTTACAATCATTCTGGCTGTGACTCCCAAATGAGCGTGTCAGAAATGTCGTGTAGTGAAAGTACATCCTCAT 1108
Query 125 GTCAGTCTCTCGAAGACGGGTCAGTTCCAGAAATTCTCATTAGCCTGCTTTATAATGCCACAAATGGGAGACTA 198
||||||||||.|||.|.||.|||||||||||||||||.|||.|||||||||||||||||||||.|||.||||||
Sbjct 1109 GTCAGTCTCTTGAACATGGCTCAGTTCCAGAAATTCTTATTGGCCTGCTTTATAATGCCACAACTGGAAGACTA 1182
Query 199 TCAGCAGAAGTGATAAAAGGCAGCCACTTAAAAAATTGGGCAGCAAACAGACCACCCA---------------- 256
|||||||||||||||||||||||||||||.|||||||.||||||||||||||||||||
Sbjct 1183 TCAGCAGAAGTGATAAAAGGCAGCCACTTCAAAAATTTGGCAGCAAACAGACCACCCAATGGACTGTTCTGTTG 1256
Query 257 -----------------------------------------ATACATATGTTAAGTTAACTCTACGGAAATCCA 289
||||||||||||||||||||||||.|||.||||
Sbjct 1257 TCTAAAACACTTGATAGGTGGACAGGTTTATATAATCCGAGATACATATGTTAAGTTAACTCTACTGAATTCCA 1330
Query 290 CGGATCAAGAGATGTCCAAATGCAAGATATCCATCCGCAGAGGGCGGCCAAATCCAGTATACAAGGAAACTTTT 363
.||.|||||||||||||||||||||||.|||||||||||||||||.|||||||||||||||.||||||||||||
Sbjct 1331 TGGGTCAAGAGATGTCCAAATGCAAGACATCCATCCGCAGAGGGCAGCCAAATCCAGTATATAAGGAAACTTTT 1404
Query 364 GT-TTTCAAAGTGACCCTATTTCAGCTTTCTCATGTGACACTCATGCTGTCTGTGTATAACAAAAGCAGCATGA 436
|| |||| |||||.|||||||||||||||||.|||||||||||||.||||||||||||||||||.|||||||||
Sbjct 1405 GTCTTTC-AAGTGGCCCTATTTCAGCTTTCTGATGTGACACTCATACTGTCTGTGTATAACAAACGCAGCATGA 1477
Query 437 GAAGAA---AGATGATAGGCTGGATTTATTTAGGTCTCAACAGCTCTGG---AGAAGAACTCAATCACTGGACT 504
.||||| ||||||||||||||||||.||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1478 AAAGAAAAGAGATGATAGGCTGGATTTCTTTAGGTCTCAACAGCTCTGGAGAAGAAGAACTCAATCACTGGACT 1551
Query 505 GAAATGAAAGAGTCAAAAGGACGGCAAGTACGTAGATGGCAGGCGTTGCTAGAGTCACGA 564
||||||||||||||||||||||.|||||||.||||||||||.|||||||||||||||
Sbjct 1552 GAAATGAAAGAGTCAAAAGGACAGCAAGTATGTAGATGGCATGCGTTGCTAGAGTCA--- 1608
