Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10690
- Subject:
- NM_001363862.1
- Aligned Length:
- 3508
- Identities:
- 2120
- Gaps:
- 1370
Alignment
Query 1 ATGGGTGACATGACCAACAGCGACTTTTACTCCAAAAACCAAAGAAATGAGTCGAGCCATGGGGGCGAGTTCGG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGGTGACATGACCAACAGCGACTTTTACTCCAAAAACCAAAGAAATGAGTCGAGCCATGGGGGCGAGTTCGG 74
Query 75 GTGCACAATGGAGGAGCTCCGCTCCCTCATGGAGCTGCGGGGCACTGAGGCTGTGGTCAAGATCAAGGAGACTT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GTGCACAATGGAGGAGCTCCGCTCCCTCATGGAGCTGCGGGGCACTGAGGCTGTGGTCAAGATCAAGGAGACTT 148
Query 149 ATGGGGACACCGAAGCCATCTGCCGGCGCCTCAAAACCTCACCTGTTGAAGGTTTGCCGGGCACCGCTCCAGAC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATGGGGACACCGAAGCCATCTGCCGGCGCCTCAAAACCTCACCTGTTGAAGGTTTGCCGGGCACCGCTCCAGAC 222
Query 223 CTGGAAAAGAGAAAGCAAATTTTTGGGCAAAACTTTATACCTCCAAAGAAGCCAAAAACCTTCCTGCAGCTCGT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTGGAAAAGAGAAAGCAAATTTTTGGGCAAAACTTTATACCTCCAAAGAAGCCAAAAACCTTCCTGCAGCTCGT 296
Query 297 GTGGGAGGCGCTGCAGGACGTGACGCTCATCATCCTGGAGATTGCCGCCATCATCTCCCTGGGGCTGTCCTTCT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTGGGAGGCGCTGCAGGACGTGACGCTCATCATCCTGGAGATTGCCGCCATCATCTCCCTGGGGCTGTCCTTCT 370
Query 371 ACCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGACGGCCCAGGGTGGGGCAGAGGATGAAGGAGAGGCAGAG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGACGGCCCAGGGTGGGGCAGAGGATGAAGGAGAGGCAGAG 444
Query 445 GCAGGTTGGATCGAGGGGGCCGCCATTCTCCTCTCAGTTATCTGTGTGGTCCTGGTCACGGCCTTCAATGACTG 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCAGGTTGGATCGAGGGGGCCGCCATTCTCCTCTCAGTTATCTGTGTGGTCCTGGTCACGGCCTTCAATGACTG 518
Query 519 GAGCAAAGAGAAACAGTTCCGGGGCCTGCAGAGCCGCATCGAGCAGGAACAGAAATTTACCGTGGTCCGGGCTG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAGCAAAGAGAAACAGTTCCGGGGCCTGCAGAGCCGCATCGAGCAGGAACAGAAATTTACCGTGGTCCGGGCTG 592
Query 593 GCCAGGTGGTGCAGATCCCTGTGGCTGAGATCGTGGTTGGGGACATAGCCCAGGTCAAATATGGTGACCTCCTC 666
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCCAGGTGGTCCAGATCCCTGTGGCTGAGATCGTGGTTGGGGACATAGCCCAGGTCAAATATGGTGACCTCCTC 666
Query 667 CCTGCCGACGGCCTCTTCATCCAGGGCAATGACCTCAAGATTGATGAAAGCTCCCTAACTGGAGAGTCTGACCA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCTGCCGACGGCCTCTTCATCCAGGGCAATGACCTCAAGATTGATGAAAGCTCCCTAACTGGAGAGTCTGACCA 740
Query 741 GGTGCGCAAGTCCGTGGACAAGGACCCCATGCTGCTGTCAGGAACCCACGTGATGGAGGGCTCAGGACGGATGT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGTGCGCAAGTCCGTGGACAAGGACCCCATGCTGCTGTCAGGAACCCACGTGATGGAGGGCTCAGGACGGATGT 814
Query 815 TGGTGACTGCTGTGGGTGTGAACTCTCAGACTGGCATCATCTTTACCCTCCTGGGGGCTGGTGGTGAAGAGGAA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGGTGACTGCTGTGGGTGTGAACTCTCAGACTGGCATCATCTTTACCCTCCTGGGGGCTGGTGGTGAAGAGGAA 888
Query 889 GAGAAGAAAGACAAAAAAGCCAAACAACAGGACGGGGCAGCCGCCATGGAGATGCAGCCCCTCAAGAGTGCCGA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GAGAAGAAAGACAAAAAAGCCAAACAACAGGACGGGGCAGCCGCCATGGAGATGCAGCCCCTCAAGAGTGCCGA 962
Query 963 GGGCGGCGACGCTGACGACAGGAAGAAGGCCAGCATGCACAAGAAGGAGAAGTCCGTGCTGCAGGGCAAGCTCA 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGGCGGCGACGCTGACGACAGGAAGAAGGCCAGCATGCACAAGAAGGAGAAGTCCGTGCTGCAGGGCAAGCTCA 1036
Query 1037 CCAAGCTGGCTGTGCAGATCGGGAAGGCGGGCTTGGTGATGTCAGCCATCACGGTGATCATCCTGGTGCTCTAC 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCAAGCTGGCTGTGCAGATCGGGAAGGCGGGCTTGGTGATGTCAGCCATCACGGTGATCATCCTGGTGCTCTAC 1110
Query 1111 TTCACTGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGCTGCCTGAGTGCACGCCCGTCTACGTGCAGTACTT 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TTCACTGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGCTGCCTGAGTGCACGCCCGTCTACGTGCAGTACTT 1184
Query 1185 TGTCAAGTTCTTCATCATTGGCGTGACGGTGCTGGTGGTCGCCGTGCCCGAGGGGCTCCCTCTGGCCGTCACCA 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TGTCAAGTTCTTCATCATTGGCGTGACGGTGCTGGTGGTCGCCGTGCCCGAGGGGCTCCCTCTGGCCGTCACCA 1258
Query 1259 TCTCGTTGGCCTATTCGGTGAAGAAAATGATGAAGGACAACAATCTGGTACGCCACCTGGATGCCTGTGAGACC 1332
|||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 1259 TCTCGTTGGCCTATTCGGTGAAGAAAATGATGAAGGACAACAACCTGGTACGCCACCTGGATGCCTGTGAGACC 1332
Query 1333 ATGGGCAATGCCACAGCCATCTGCTCAGACAAGACAGGCACGCTGACCACCAATCGCATGACAGTGGTACAGGC 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ATGGGCAATGCCACAGCCATCTGCTCAGACAAGACAGGCACGCTGACCACCAATCGCATGACAGTGGTACAGGC 1406
Query 1407 CTATGTCGGCGACGTCCACTATAAAGAGATCCCCGACCCCAGCTCCATCAACACCAAGACCATGGAGCTGCTGA 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CTATGTCGGCGACGTCCACTATAAAGAGATCCCCGACCCCAGCTCCATCAACACCAAGACCATGGAGCTGCTGA 1480
Query 1481 TCAATGCCATCGCCATCAACAGCGCCTACACCACCAAGATTCTGCCCCCAGAGAAGGAGGGCGCCCTGCCTCGG 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 TCAATGCCATCGCCATCAACAGCGCCTACACCACCAAGATTCTGCCCCCAGAGAAGGAGGGCGCCCTGCCTCGG 1554
Query 1555 CAGGTGGGCAACAAGACGGAGTGCGGCCTGCTGGGCTTCGTGCTGGACCTGAAGCAGGACTACGAGCCCGTGCG 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CAGGTGGGCAACAAGACGGAGTGCGGCCTGCTGGGCTTCGTGCTGGACCTGAAGCAGGACTACGAGCCCGTGCG 1628
Query 1629 CAGCCAGATGCCAGAGGAGAAGTTGTACAAAGTGTACACCTTCAACTCCGTGCGCAAGTCCATGAGCACTGTCA 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CAGCCAGATGCCAGAGGAGAAGTTGTACAAAGTGTACACCTTCAACTCCGTGCGCAAGTCCATGAGCACTGTCA 1702
Query 1703 TCAAGCTGCCCGACGAGAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAA 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TCAAGCTGCCCGACGAGAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAA 1776
Query 1777 ATCCTCAATGGGGCGGGAGAGCCTCGTGTCTTCCGGCCCCGCGACCGGGACGAGATGGTAAAGAAGGTGATTGA 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 ATCCTCAATGGGGCGGGAGAGCCTCGTGTCTTCCGGCCCCGCGACCGGGACGAGATGGTAAAGAAGGTGATTGA 1850
Query 1851 GCCCATGGCTTGCGATGGGCTCCGCACTATCTGCGTGGCCTACCGCGACTTCCCCAGCAGCCCGGAGCCGGACT 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GCCCATGGCTTGCGATGGGCTCCGCACTATCTGCGTGGCCTACCGCGACTTCCCCAGCAGCCCGGAGCCGGACT 1924
Query 1925 GGGACAATGAGAATGACATCCTCAACGAACTCACCTGCATCTGCGTGGTGGGCATCGAGGACCCGGTGCGGCCA 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GGGACAATGAGAATGACATCCTCAACGAACTCACCTGCATCTGCGTGGTGGGCATCGAGGACCCGGTGCGGCCA 1998
Query 1999 GAGGTCCCAGAAGCCATCCGCAAGTGCCAGCGGGCAGGCAT----GT--------------------------- 2041
||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1999 GAGGTCCCAGAAGCCATCCGCAAGTGCCAGCGGGCAGGCATCACGGTCCGCATGGTCACTGGCGACAATATCAA 2072
Query 2042 ----------------------------------ATCCA------GGA-------------------------- 2049
||||| |||
Sbjct 2073 CACGGCTCGGGCCATCGCCATCAAGTGTGGCATCATCCATCCTGGGGAGGACTTTCTGTGCCTCGAGGGCAAGG 2146
Query 2050 ----------GAGGAACTGCATAACCA-AAGGGG-----TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGT 2107
|||||.|.|| |||.| |||||| |||.||| |.||..||||
Sbjct 2147 AGTTCAACAGGAGGATCCGC--AACGAGAAGGGGGAGATTGAGCAG---------GAGCGAATTG--------- 2200
Query 2108 ACAAACGCCA-----CCAAAGC--CAGCCCACTGCT------CTCCT---------ACAAG------------G 2147
|||| .| ||||||| |.| .|||| ||||| ||||| .
Sbjct 2201 ACAA----GATCTGGCCAAAGCTGCGG----GTGCTGGCTCGCTCCTCCCCAACGGACAAGCATACCCTGGTTA 2266
Query 2148 AAGGAAAGAT----------------------CTGCACGTG--------------------------------- 2166
||||.|..|| |.|||.|||
Sbjct 2267 AAGGCATCATCGACAGCACACACACTGAGCAGCGGCAGGTGGTGGCCGTGACGGGGGACGGGACCAACGACGGG 2340
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2341 CCTGCACTCAAGAAGGCCGACGTGGGCTTCGCCATGGGCATCGCAGGCACTGACGTGGCCAAGGAGGCCTCAGA 2414
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2415 CATCATCCTGACAGACGACAATTTCAGCAGCATCGTCAAGGCAGTGATGTGGGGCCGCAACGTCTATGACAGCA 2488
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2489 TCTCCAAATTCTTGCAGTTCCAGCTCACCGTCAACGTGGTGGCCGTGATTGTGGCCTTCACAGGCGCCTGCATC 2562
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2563 ACGCAGGACTCCCCTCTGAAGGCCGTGCAGATGCTCTGGGTGAACCTCATCATGGACACGTTTGCCTCGCTGGC 2636
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2637 ACTGGCCACTGAGCCGCCCACGGAGACCCTGCTGCTGAGGAAGCCGTACGGCCGCAACAAGCCGCTCATCTCCA 2710
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2711 GGACCATGATGAAGAACATCCTGGGCCATGCTGTCTACCAGCTTGCCCTCATCTTCACCCTGCTCTTTGTTGGC 2784
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2785 GAGAAGATGTTCCAGATCGACAGCGGGAGGAACGCGCCCCTGCATTCGCCACCCTCAGAACATTACACCATCAT 2858
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2859 CTTCAACACCTTCGTCATGATGCAGCTCTTCAACGAGATCAACGCCCGCAAGATCCACGGCGAGCGCAATGTCT 2932
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2933 TTGACGGCATCTTCCGGAACCCCATCTTCTGCACCATCGTGCTGGGCACCTTTGCCATCCAGATAGTGATCGTG 3006
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3007 CAGTTTGGAGGGAAGCCATTCAGCTGCTCTCCACTGCAGCTGGACCAGTGGATGTGGTGCATATTCATTGGGTT 3080
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3081 AGGAGAGCTCGTTTGGGGCCAGGTCATCGCCACCATCCCGACCAGCAGACTCAAGTTCCTCAAGGAGGCAGGCA 3154
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3155 GGCTCACACAGAAGGAGGAGATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGGAGATCGACCACGCGGAGCGG 3228
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3229 GAGCTGCGGCGGGGCCAGATCCTGTGGTTCCGAGGCCTGAATCGGATCCAGACACAGATTGAAGTAGTCAATAC 3302
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3303 TTTCAAGAGCGGGGCCTCCTTTCAGGGGGCCCTGCGGAGACAGTCCTCGGTCACCAGCCAGAGCCAGGATGTAG 3376
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3377 CCAATCTCTCTAGCCCTAGTCGCGTGTCGTTGTCCAATGCTCTTTCCTCTCCGACCAGCCTTCCTCCTGCTGCA 3450
Query 2167 ------------------------------ 2166
Sbjct 3451 GCCGGGCATCCGCGTCGTGAAGGCGTTCCG 3480
