Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10690
- Subject:
- XM_011241169.2
- Aligned Length:
- 3551
- Identities:
- 1946
- Gaps:
- 1414
Alignment
Query 1 ATGGGTGACATGACCAACAGCGACTTTTACTCCAAAAACCAAAGAAATGAGTCGAGCCATGGGGGCGAGTTCGG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGGTGACATGACCAACAGCGACTTTTACTCCAAAAACCAAAGAAATGAGTCGAGCCATGGGGGCGAGTTCGG 74
Query 75 GTGCACAATGGAGGAGCTCCGCTCCCTCATGGAGCTGCGGGGCACTGAGGCTGTGGTCAAGATCAAGGAGACTT 148
||||||.|||||||||||.||||||||||||||||||||||||||.||||||||||||||||||||||||||.|
Sbjct 75 GTGCACCATGGAGGAGCTGCGCTCCCTCATGGAGCTGCGGGGCACCGAGGCTGTGGTCAAGATCAAGGAGACGT 148
Query 149 ATGGGGACACCGAAGCCATCTGCCGGCGCCTCAAAACCTCACCTGTTGAAGGTTTGCCGGGCACCGCTCCAGAC 222
||||||||||.|||||||||||||||||||||||||||||.||||||||||||||.||.|||||.|||||||||
Sbjct 149 ATGGGGACACTGAAGCCATCTGCCGGCGCCTCAAAACCTCGCCTGTTGAAGGTTTACCAGGCACTGCTCCAGAC 222
Query 223 CTGGAAAAGAGAAAGCAAATTTTTGGGCAAAACTTTATACCTCCAAAGAAGCCAAAAACCTTCCTGCAGCTCGT 296
.||||||||||.||.||.|||||||||||||||||.||||||||||||||.||||||||||||||||||||.||
Sbjct 223 TTGGAAAAGAGGAAACAGATTTTTGGGCAAAACTTCATACCTCCAAAGAAACCAAAAACCTTCCTGCAGCTGGT 296
Query 297 GTGGGAGGCGCTGCAGGACGTGACGCTCATCATCCTGGAGATTGCCGCCATCATCTCCCTGGGGCTGTCCTTCT 370
||||||.|||||.|||||||||||.||.||||||||||||||.||.|||||||||||||||||.||||||||||
Sbjct 297 GTGGGAAGCGCTACAGGACGTGACACTTATCATCCTGGAGATCGCGGCCATCATCTCCCTGGGACTGTCCTTCT 370
Query 371 ACCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGACGGCCCAGGGTGGGGCAGAGGATGAAGGAGAGGCAGAG 444
|||||||.||.||.|||.||||.|||||||||||.|||||||||||||||||||||||||||||.||.|||||.
Sbjct 371 ACCACCCACCGGGAGAGAGCAATGAAGGATGTGCCACGGCCCAGGGTGGGGCAGAGGATGAAGGTGAAGCAGAA 444
Query 445 GCAGGTTGGATCGAGGGGGCCGCCATTCTCCTCTCAGTTATCTGTGTGGTCCTGGTCACGGCCTTCAATGACTG 518
|||||.|||||.||||||||.|||||.||.||.|||||.||||||||||||||||||||.||||||||||||||
Sbjct 445 GCAGGCTGGATTGAGGGGGCTGCCATCCTGCTGTCAGTCATCTGTGTGGTCCTGGTCACAGCCTTCAATGACTG 518
Query 519 GAGCAAAGAGAAACAGTTCCGGGGCCTGCAGAGCCGCATCGAGCAGGAACAGAAATTTACCGTGGTCCGGGCTG 592
|||.||.|||||||||||||||||||||||||||||.||.||||||||.|||||.||.||.|||||||||||.|
Sbjct 519 GAGTAAGGAGAAACAGTTCCGGGGCCTGCAGAGCCGAATTGAGCAGGAGCAGAAGTTCACTGTGGTCCGGGCCG 592
Query 593 GCCAGGTGGTGCAGATCCCTGTGGCTGAGATCGTGGTTGGGGACATAGCCCAGGTCAAATATGGTGACCTCCTC 666
||||||||||.||||||||||||||.|||||||||||.||||||||.||||||.||||||||||||||||.||.
Sbjct 593 GCCAGGTGGTTCAGATCCCTGTGGCCGAGATCGTGGTCGGGGACATTGCCCAGATCAAATATGGTGACCTTCTT 666
Query 667 CCTGCCGACGGCCTCTTCATCCAGGGCAATGACCTCAAGATTGATGAAAGCTCCCTAACTGGAGAGTCTGACCA 740
||.||.||.|||||||||||||||||.|||||||||||.||||||||||||||.||.||.||.||.||||||||
Sbjct 667 CCCGCTGATGGCCTCTTCATCCAGGGAAATGACCTCAAAATTGATGAAAGCTCACTCACAGGGGAATCTGACCA 740
Query 741 GGTGCGCAAGTCCGTGGACAAGGACCCCATGCTGCTGTCAGGAACCCACGTGATGGAGGGCTCAGGACGGATGT 814
||||||||||||.|||||.||||||||||||.||||||||||||||||.||||||||||||||||||||||||.
Sbjct 741 GGTGCGCAAGTCTGTGGATAAGGACCCCATGTTGCTGTCAGGAACCCATGTGATGGAGGGCTCAGGACGGATGG 814
Query 815 TGGTGACTGCTGTGGGTGTGAACTCTCAGACTGGCATCATCTTTACCCTCCTGGGGGCTGGTGGTGAAGAGGAA 888
||||.|||||||||||||||||||||||||||||||||||.||||||||.||.|||||||||||||||||||||
Sbjct 815 TGGTTACTGCTGTGGGTGTGAACTCTCAGACTGGCATCATATTTACCCTGCTTGGGGCTGGTGGTGAAGAGGAA 888
Query 889 GAGAAGAAAGACAAA------------------------------------------AAAGCCAAACAACAGGA 920
||||||||||||||| ||||||||.||.|||||
Sbjct 889 GAGAAGAAAGACAAAAAAGGTAAAATGCAGGATGGCAGTGCCGACAGCAGCCAGAGCAAAGCCAAGCAGCAGGA 962
Query 921 CGGGGCAGCCGCCATGGAGATGCAGCCCCTCAAGAGTGCCGAGGGCGGCGACGCTGACGACAGGAAGAAGGCCA 994
.||||||||.|||||||||||||||||.||.||||||||.|||||||||||.||.||.||||.||||||.||||
Sbjct 963 TGGGGCAGCTGCCATGGAGATGCAGCCTCTGAAGAGTGCAGAGGGCGGCGATGCAGATGACAAGAAGAAAGCCA 1036
Query 995 GCATGCACAAGAAGGAGAAGTCCGTGCTGCAGGGCAAGCTCACCAAGCTGGCTGTGCAGATCGGGAAGGCGGGC 1068
.||||||||||||.||||||||.|||||.|||||||||||||||||.||||||||||||||.||.|||||||||
Sbjct 1037 ACATGCACAAGAAAGAGAAGTCGGTGCTTCAGGGCAAGCTCACCAAACTGGCTGTGCAGATAGGCAAGGCGGGC 1110
Query 1069 TTGGTGATGTCAGCCATCACGGTGATCATCCTGGTGCTCTACTTCACTGTGGACACCTTCGTGGTCAACAAGAA 1142
.||||||||||.||||||||.||||||||||||||.|||||||||||.||||||||||||||||||||||||||
Sbjct 1111 CTGGTGATGTCGGCCATCACAGTGATCATCCTGGTACTCTACTTCACCGTGGACACCTTCGTGGTCAACAAGAA 1184
Query 1143 GCCGTGGCTGCCTGAGTGCACGCCCGTCTACGTGCAGTACTTTGTCAAGTTCTTCATCATTGGCGTGACGGTGC 1216
|||.||||||.|.||.|||||.|||||||||||.|||||||||||||||||||||||||||||.||||||||||
Sbjct 1185 GCCATGGCTGACGGAATGCACACCCGTCTACGTACAGTACTTTGTCAAGTTCTTCATCATTGGTGTGACGGTGC 1258
Query 1217 TGGTGGTCGCCGTGCCCGAGGGGCTCCCTCTGGCCGTCACCATCTCGTTGGCCTATTCGGTGAAGAAAATGATG 1290
||||||||||.|||||||||||.|||||||||||.|||||||||||..||||||||||.|||||||||||||||
Sbjct 1259 TGGTGGTCGCTGTGCCCGAGGGCCTCCCTCTGGCTGTCACCATCTCACTGGCCTATTCTGTGAAGAAAATGATG 1332
Query 1291 AAGGACAACAATCTGGTACGCCACCTGGATGCCTGTGAGACCATGGGCAATGCCACAGCCATCTGCTCAGACAA 1364
|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AAGGACAACAACCTGGTACGCCACCTGGATGCCTGTGAGACCATGGGCAATGCCACAGCCATCTGCTCAGACAA 1406
Query 1365 GACAGGCACGCTGACCACCAATCGCATGACAGTGGTACAGGCCTATGTCGGCGACGTCCACTATAAAGAGATCC 1438
||||||.||||||||||||||.||||||||.|||||.||||||||||||||.|||||||||||.||.|||||||
Sbjct 1407 GACAGGAACGCTGACCACCAACCGCATGACCGTGGTCCAGGCCTATGTCGGTGACGTCCACTACAAGGAGATCC 1480
Query 1439 CCGACCCCAGCTCCATCAACACCAAGACCATGGAGCTGCTGATCAATGCCATCGCCATCAACAGCGCCTACACC 1512
||||.||||||||||||||..|||||||..|||||||||||.||||.|||||.|||||||||||||||||||||
Sbjct 1481 CCGATCCCAGCTCCATCAATGCCAAGACGCTGGAGCTGCTGGTCAACGCCATTGCCATCAACAGCGCCTACACC 1554
Query 1513 ACCAAGATTCTGCCCCCAGAGAAGGAGGGCGCCCTGCCTCGGCAGGTGGGCAACAAGACGGAGTGCGGCCTGCT 1586
||||||||.||.||||||||.||.|||||.||||||||.||||||||||||||||||||.||||||||||||||
Sbjct 1555 ACCAAGATCCTTCCCCCAGAAAAAGAGGGAGCCCTGCCCCGGCAGGTGGGCAACAAGACAGAGTGCGGCCTGCT 1628
Query 1587 GGGCTTCGTGCTGGACCTGAAGCAGGACTACGAGCCCGTGCGCAGCCAGATGCCAGAGGAGAAGTTGTACAAAG 1660
||||||.|||||||||.|||.|||||||||||||||.|||||||||||||||||||||||||||.||||.||.|
Sbjct 1629 GGGCTTTGTGCTGGACTTGAGGCAGGACTACGAGCCGGTGCGCAGCCAGATGCCAGAGGAGAAGCTGTATAAGG 1702
Query 1661 TGTACACCTTCAACTCCGTGCGCAAGTCCATGAGCACTGTCATCAAGCTGCCCGACGAGAGCTTCCGCATGTAC 1734
|||||||||||||||||||||||||||||||||||||.|||||||||.||||||||||||||||||||||||||
Sbjct 1703 TGTACACCTTCAACTCCGTGCGCAAGTCCATGAGCACCGTCATCAAGATGCCCGACGAGAGCTTCCGCATGTAC 1776
Query 1735 AGCAAGGGGGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAATCCTCAATGGGGC--GGGAGAGCCTCGTGTC 1806
||||||||.||.||.|||||.||||||||.|||||||||||.|||||||.|||||| |||| |||| ||||||
Sbjct 1777 AGCAAGGGCGCCTCGGAGATTGTGCTCAAAAAGTGCTGCAAGATCCTCAGTGGGGCAGGGGA-AGCC-CGTGTC 1848
Query 1807 TTCCGGCCCCGCGACCGGGACGAGATGGTAAAGAAGGTGATTGAGCCCATGGCTTGCGATGGGCTCCGCACTAT 1880
|||||||||||.|||.||||.||||||||.|||||||||||||||||||||||.||.||.||||||||.||.||
Sbjct 1849 TTCCGGCCCCGAGACAGGGATGAGATGGTTAAGAAGGTGATTGAGCCCATGGCCTGTGACGGGCTCCGTACCAT 1922
Query 1881 CTGCGTGGCCTACCGCGACTTCCCCAGCAGCCCGGAGCCGGACTGGGACAATGAGAATGACATCCTCAACGAAC 1954
||||||||||||.||.|||||||||||||||||.|||||.|||||||||||||||||||||||.|||||.||||
Sbjct 1923 CTGCGTGGCCTATCGTGACTTCCCCAGCAGCCCTGAGCCTGACTGGGACAATGAGAATGACATTCTCAATGAAC 1996
Query 1955 TCACCTGCATCTGCGTGGTGGGCATCGAGGACCCGGTGCGGCCAGAGGTCCCAGAAGCCATCCGCAAGTGCCAG 2028
||||.|||||||||||||||||||||||.|||||.||.||.||.||||||||||||||||||||||||||||||
Sbjct 1997 TCACGTGCATCTGCGTGGTGGGCATCGAAGACCCAGTACGACCTGAGGTCCCAGAAGCCATCCGCAAGTGCCAG 2070
Query 2029 CGGGCAGGCATGTATC-CAGGAGAGGAACTGCA---TAACCAAAGGGGTGAC----------CAGCCC------ 2082
||||||| ||||| ||| .|.||| |.||| |||||| ||||||
Sbjct 2071 CGGGCAG----GTATCACAG-------TCCGCATGGTCACC-----GGTGACAATATCAACACAGCCCGGGCCA 2128
Query 2083 ------TCAGATGTG--CTTAT------TGGA------TTCCAGTAC---AAACGCCACCAAAGCCAGCCCACT 2133
|||..|||| .|||| |||| ||||.||.| .||.| ||||| |.|
Sbjct 2129 TCGCCATCAAGTGTGGCATTATCCACCCTGGAGAGGACTTCCTGTGCCTGGAAGG----CAAAG-------AAT 2191
Query 2134 GCTCTC----------CTACAAG--------------GAAGGA----------AAGATCTGCAC---------- 2163
.|..|| |.||.|| |.|||| ||||||||..|
Sbjct 2192 TCAATCGGAGGATTCGCAACGAGAAGGGGGAGATTGAGCAGGAGCGGATTGACAAGATCTGGCCAAAGCTGAGG 2265
Query 2164 GTG----------------------------------------------------------------------- 2166
|||
Sbjct 2266 GTGCTGGCTCGCTCCTCGCCCACGGATAAGCACACGCTGGTCAAAGGCATCATCGACAGTACACACACTGAGCA 2339
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2340 GCGGCAGGTGGTGGCTGTGACAGGGGATGGGACCAACGACGGGCCTGCTCTCAAGAAGGCAGATGTGGGCTTCG 2413
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2414 CAATGGGCATCGCAGGCACAGATGTGGCCAAGGAGGCCTCAGACATCATCCTGACAGATGACAACTTCAGCAGC 2487
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2488 ATCGTCAAGGCAGTGATGTGGGGCCGTAACGTCTATGACAGCATATCCAAATTCCTGCAGTTCCAGCTGACTGT 2561
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2562 CAACGTGGTGGCGGTGATCGTGGCCTTCACGGGCGCCTGCATTACACAGGACTCCCCTCTCAAGGCTGTGCAGA 2635
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2636 TGCTCTGGGTGAACCTCATCATGGACACGTTTGCCTCCCTGGCCCTGGCCACAGAGCCACCTACGGAGACTCTG 2709
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2710 CTTCTGAGGAAACCGTACGGTCGCAACAAGCCGCTCATCTCGAGGACCATGATGAAGAACATCCTGGGCCACGC 2783
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2784 CGTCTACCAGCTCACCCTCATCTTCACCCTGCTCTTCGTGGGTGAGAAGATGTTCCAGATCGACAGCGGAAGGA 2857
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2858 ACGCCCCGCTGCACTCACCACCCTCAGAGCACTACACCATCATCTTCAACACCTTCGTCATGATGCAGCTTTTC 2931
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2932 AACGAGATCAACGCCCGCAAGATCCACGGCGAGCGCAACGTCTTTGACGGGATCTTCCGGAACCCCATCTTCTG 3005
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3006 CACCATCGTTCTTGGCACTTTCGCCATCCAGATAGTGATCGTGCAGTTTGGCGGGAAGCCCTTCAGCTGCTCCC 3079
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3080 CACTCCAGCTGGACCAGTGGATGTGGTGCATCTTCATAGGCCTGGGAGAGCTCGTCTGGGGCCAGGTCATCGCC 3153
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3154 ACCATCCCTACCAGCAGGCTCAAGTTCCTGAAAGAGGCAGGGCGTCTAACACAGAAGGAGGAGATCCCCGAGGA 3227
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3228 GGAGTTAAATGAGGATGTGGAAGAGATAGACCACGCAGAGCGGGAGCTTCGCCGTGGCCAGATCCTGTGGTTCC 3301
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3302 GGGGCCTGAATCGGATCCAGACACAGATTGAAGTAGTCAATACTTTCAAGAGCGGGGCCTCCTTCCAGGGGGCC 3375
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3376 CTGCGGAGACAGTCCTCCGTCACCAGCCAGAGCCAGGACGTAGCCAGTCTCTCTAGTCCTAGTCGCGTGTCGTT 3449
Query 2167 ------------------------------------------------------------------------- 2166
Sbjct 3450 ATCCAATGCTCTTTCCTCTCCGACCAGCCTTCCTCCTGCTGCAGCTGGGCATCCGCGTCGTGAAGGCGTTCCG 3522
