Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10690
- Subject:
- XM_017006488.2
- Aligned Length:
- 3550
- Identities:
- 2120
- Gaps:
- 1412
Alignment
Query 1 ATGGGTGACATGACCAACAGCGACTTTTACTCCAAAAACCAAAGAAATGAGTCGAGCCATGGGGGCGAGTTCGG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGGTGACATGACCAACAGCGACTTTTACTCCAAAAACCAAAGAAATGAGTCGAGCCATGGGGGCGAGTTCGG 74
Query 75 GTGCACAATGGAGGAGCTCCGCTCCCTCATGGAGCTGCGGGGCACTGAGGCTGTGGTCAAGATCAAGGAGACTT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GTGCACAATGGAGGAGCTCCGCTCCCTCATGGAGCTGCGGGGCACTGAGGCTGTGGTCAAGATCAAGGAGACTT 148
Query 149 ATGGGGACACCGAAGCCATCTGCCGGCGCCTCAAAACCTCACCTGTTGAAGGTTTGCCGGGCACCGCTCCAGAC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATGGGGACACCGAAGCCATCTGCCGGCGCCTCAAAACCTCACCTGTTGAAGGTTTGCCGGGCACCGCTCCAGAC 222
Query 223 CTGGAAAAGAGAAAGCAAATTTTTGGGCAAAACTTTATACCTCCAAAGAAGCCAAAAACCTTCCTGCAGCTCGT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTGGAAAAGAGAAAGCAAATTTTTGGGCAAAACTTTATACCTCCAAAGAAGCCAAAAACCTTCCTGCAGCTCGT 296
Query 297 GTGGGAGGCGCTGCAGGACGTGACGCTCATCATCCTGGAGATTGCCGCCATCATCTCCCTGGGGCTGTCCTTCT 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GTGGGAGGCGCTGCAGGACGTGACGCTCATCATCCTGGAGATTGCCGCCATCATCTCCCTGGGGCTGTCCTTCT 370
Query 371 ACCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGACGGCCCAGGGTGGGGCAGAGGATGAAGGAGAGGCAGAG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGACGGCCCAGGGTGGGGCAGAGGATGAAGGAGAGGCAGAG 444
Query 445 GCAGGTTGGATCGAGGGGGCCGCCATTCTCCTCTCAGTTATCTGTGTGGTCCTGGTCACGGCCTTCAATGACTG 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCAGGTTGGATCGAGGGGGCCGCCATTCTCCTCTCAGTTATCTGTGTGGTCCTGGTCACGGCCTTCAATGACTG 518
Query 519 GAGCAAAGAGAAACAGTTCCGGGGCCTGCAGAGCCGCATCGAGCAGGAACAGAAATTTACCGTGGTCCGGGCTG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAGCAAAGAGAAACAGTTCCGGGGCCTGCAGAGCCGCATCGAGCAGGAACAGAAATTTACCGTGGTCCGGGCTG 592
Query 593 GCCAGGTGGTGCAGATCCCTGTGGCTGAGATCGTGGTTGGGGACATAGCCCAGGTCAAATATGGTGACCTCCTC 666
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCCAGGTGGTCCAGATCCCTGTGGCTGAGATCGTGGTTGGGGACATAGCCCAGGTCAAATATGGTGACCTCCTC 666
Query 667 CCTGCCGACGGCCTCTTCATCCAGGGCAATGACCTCAAGATTGATGAAAGCTCCCTAACTGGAGAGTCTGACCA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCTGCCGACGGCCTCTTCATCCAGGGCAATGACCTCAAGATTGATGAAAGCTCCCTAACTGGAGAGTCTGACCA 740
Query 741 GGTGCGCAAGTCCGTGGACAAGGACCCCATGCTGCTGTCAGGAACCCACGTGATGGAGGGCTCAGGACGGATGT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGTGCGCAAGTCCGTGGACAAGGACCCCATGCTGCTGTCAGGAACCCACGTGATGGAGGGCTCAGGACGGATGT 814
Query 815 TGGTGACTGCTGTGGGTGTGAACTCTCAGACTGGCATCATCTTTACCCTCCTGGGGGCTGGTGGTGAAGAGGAA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGGTGACTGCTGTGGGTGTGAACTCTCAGACTGGCATCATCTTTACCCTCCTGGGGGCTGGTGGTGAAGAGGAA 888
Query 889 GAGAAGAAAGACAAA------------------------------------------AAAGCCAAACAACAGGA 920
||||||||||||||| |||||||||||||||||
Sbjct 889 GAGAAGAAAGACAAAAAAGGTAAAATGCAGGATGGCAATGTGGACGCCAGCCAGAGCAAAGCCAAACAACAGGA 962
Query 921 CGGGGCAGCCGCCATGGAGATGCAGCCCCTCAAGAGTGCCGAGGGCGGCGACGCTGACGACAGGAAGAAGGCCA 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CGGGGCAGCCGCCATGGAGATGCAGCCCCTCAAGAGTGCCGAGGGCGGCGACGCTGACGACAGGAAGAAGGCCA 1036
Query 995 GCATGCACAAGAAGGAGAAGTCCGTGCTGCAGGGCAAGCTCACCAAGCTGGCTGTGCAGATCGGGAAGGCGGGC 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GCATGCACAAGAAGGAGAAGTCCGTGCTGCAGGGCAAGCTCACCAAGCTGGCTGTGCAGATCGGGAAGGCGGGC 1110
Query 1069 TTGGTGATGTCAGCCATCACGGTGATCATCCTGGTGCTCTACTTCACTGTGGACACCTTCGTGGTCAACAAGAA 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TTGGTGATGTCAGCCATCACGGTGATCATCCTGGTGCTCTACTTCACTGTGGACACCTTCGTGGTCAACAAGAA 1184
Query 1143 GCCGTGGCTGCCTGAGTGCACGCCCGTCTACGTGCAGTACTTTGTCAAGTTCTTCATCATTGGCGTGACGGTGC 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCCGTGGCTGCCTGAGTGCACGCCCGTCTACGTGCAGTACTTTGTCAAGTTCTTCATCATTGGCGTGACGGTGC 1258
Query 1217 TGGTGGTCGCCGTGCCCGAGGGGCTCCCTCTGGCCGTCACCATCTCGTTGGCCTATTCGGTGAAGAAAATGATG 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGGTGGTCGCCGTGCCCGAGGGGCTCCCTCTGGCCGTCACCATCTCGTTGGCCTATTCGGTGAAGAAAATGATG 1332
Query 1291 AAGGACAACAATCTGGTACGCCACCTGGATGCCTGTGAGACCATGGGCAATGCCACAGCCATCTGCTCAGACAA 1364
|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AAGGACAACAACCTGGTACGCCACCTGGATGCCTGTGAGACCATGGGCAATGCCACAGCCATCTGCTCAGACAA 1406
Query 1365 GACAGGCACGCTGACCACCAATCGCATGACAGTGGTACAGGCCTATGTCGGCGACGTCCACTATAAAGAGATCC 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GACAGGCACGCTGACCACCAATCGCATGACAGTGGTACAGGCCTATGTCGGCGACGTCCACTATAAAGAGATCC 1480
Query 1439 CCGACCCCAGCTCCATCAACACCAAGACCATGGAGCTGCTGATCAATGCCATCGCCATCAACAGCGCCTACACC 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCGACCCCAGCTCCATCAACACCAAGACCATGGAGCTGCTGATCAATGCCATCGCCATCAACAGCGCCTACACC 1554
Query 1513 ACCAAGATTCTGCCCCCAGAGAAGGAGGGCGCCCTGCCTCGGCAGGTGGGCAACAAGACGGAGTGCGGCCTGCT 1586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ACCAAGATTCTGCCCCCAGAGAAGGAGGGCGCCCTGCCTCGGCAGGTGGGCAACAAGACGGAGTGCGGCCTGCT 1628
Query 1587 GGGCTTCGTGCTGGACCTGAAGCAGGACTACGAGCCCGTGCGCAGCCAGATGCCAGAGGAGAAGTTGTACAAAG 1660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GGGCTTCGTGCTGGACCTGAAGCAGGACTACGAGCCCGTGCGCAGCCAGATGCCAGAGGAGAAGTTGTACAAAG 1702
Query 1661 TGTACACCTTCAACTCCGTGCGCAAGTCCATGAGCACTGTCATCAAGCTGCCCGACGAGAGCTTCCGCATGTAC 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TGTACACCTTCAACTCCGTGCGCAAGTCCATGAGCACTGTCATCAAGCTGCCCGACGAGAGCTTCCGCATGTAC 1776
Query 1735 AGCAAGGGGGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGCCTCGTGTCTT 1808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 AGCAAGGGGGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGCCTCGTGTCTT 1850
Query 1809 CCGGCCCCGCGACCGGGACGAGATGGTAAAGAAGGTGATTGAGCCCATGGCTTGCGATGGGCTCCGCACTATCT 1882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CCGGCCCCGCGACCGGGACGAGATGGTAAAGAAGGTGATTGAGCCCATGGCTTGCGATGGGCTCCGCACTATCT 1924
Query 1883 GCGTGGCCTACCGCGACTTCCCCAGCAGCCCGGAGCCGGACTGGGACAATGAGAATGACATCCTCAACGAACTC 1956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GCGTGGCCTACCGCGACTTCCCCAGCAGCCCGGAGCCGGACTGGGACAATGAGAATGACATCCTCAACGAACTC 1998
Query 1957 ACCTGCATCTGCGTGGTGGGCATCGAGGACCCGGTGCGGCCAGAGGTCCCAGAAGCCATCCGCAAGTGCCAGCG 2030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 ACCTGCATCTGCGTGGTGGGCATCGAGGACCCGGTGCGGCCAGAGGTCCCAGAAGCCATCCGCAAGTGCCAGCG 2072
Query 2031 GGCAGGCAT----GT----------------------------------------------------------- 2041
||||||||| ||
Sbjct 2073 GGCAGGCATCACGGTCCGCATGGTCACTGGCGACAATATCAACACGGCTCGGGCCATCGCCATCAAGTGTGGCA 2146
Query 2042 --ATCCA------GGA------------------------------------GAGGAACTGCATAACCA-AAGG 2070
||||| ||| |||||.|.|| |||.| ||||
Sbjct 2147 TCATCCATCCTGGGGAGGACTTTCTGTGCCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGC--AACGAGAAGG 2218
Query 2071 GG-----TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCA-----CCAAAGC--CAGCCCAC 2132
|| |||.||| |.||..|||| |||| .| ||||||| |.| .
Sbjct 2219 GGGAGATTGAGCAG---------GAGCGAATTG---------ACAA----GATCTGGCCAAAGCTGCGG----G 2266
Query 2133 TGCT------CTCCT---------ACAAG------------GAAGGAAAGAT---------------------- 2157
|||| ||||| ||||| .||||.|..||
Sbjct 2267 TGCTGGCTCGCTCCTCCCCAACGGACAAGCATACCCTGGTTAAAGGCATCATCGACAGCACACACACTGAGCAG 2340
Query 2158 CTGCACGTG----------------------------------------------------------------- 2166
|.|||.|||
Sbjct 2341 CGGCAGGTGGTGGCCGTGACGGGGGACGGGACCAACGACGGGCCTGCACTCAAGAAGGCCGACGTGGGCTTCGC 2414
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2415 CATGGGCATCGCAGGCACTGACGTGGCCAAGGAGGCCTCAGACATCATCCTGACAGACGACAATTTCAGCAGCA 2488
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2489 TCGTCAAGGCAGTGATGTGGGGCCGCAACGTCTATGACAGCATCTCCAAATTCTTGCAGTTCCAGCTCACCGTC 2562
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2563 AACGTGGTGGCCGTGATTGTGGCCTTCACAGGCGCCTGCATCACGCAGGACTCCCCTCTGAAGGCCGTGCAGAT 2636
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2637 GCTCTGGGTGAACCTCATCATGGACACGTTTGCCTCGCTGGCACTGGCCACTGAGCCGCCCACGGAGACCCTGC 2710
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2711 TGCTGAGGAAGCCGTACGGCCGCAACAAGCCGCTCATCTCCAGGACCATGATGAAGAACATCCTGGGCCATGCT 2784
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2785 GTCTACCAGCTTGCCCTCATCTTCACCCTGCTCTTTGTTGGCGAGAAGATGTTCCAGATCGACAGCGGGAGGAA 2858
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2859 CGCGCCCCTGCATTCGCCACCCTCAGAACATTACACCATCATCTTCAACACCTTCGTCATGATGCAGCTCTTCA 2932
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 2933 ACGAGATCAACGCCCGCAAGATCCACGGCGAGCGCAATGTCTTTGACGGCATCTTCCGGAACCCCATCTTCTGC 3006
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3007 ACCATCGTGCTGGGCACCTTTGCCATCCAGATAGTGATCGTGCAGTTTGGAGGGAAGCCATTCAGCTGCTCTCC 3080
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3081 ACTGCAGCTGGACCAGTGGATGTGGTGCATATTCATTGGGTTAGGAGAGCTCGTTTGGGGCCAGGTCATCGCCA 3154
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3155 CCATCCCGACCAGCAGACTCAAGTTCCTCAAGGAGGCAGGCAGGCTCACACAGAAGGAGGAGATCCCGGAGGAG 3228
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3229 GAGCTCAACGAGGACGTGGAGGAGATCGACCACGCGGAGCGGGAGCTGCGGCGGGGCCAGATCCTGTGGTTCCG 3302
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3303 AGGCCTGAATCGGATCCAGACACAGATTGAAGTAGTCAATACTTTCAAGAGCGGGGCCTCCTTTCAGGGGGCCC 3376
Query 2167 -------------------------------------------------------------------------- 2166
Sbjct 3377 TGCGGAGACAGTCCTCGGTCACCAGCCAGAGCCAGGATGTAGCCAATCTCTCTAGCCCTAGTCGCGTGTCGTTG 3450
Query 2167 ------------------------------------------------------------------------ 2166
Sbjct 3451 TCCAATGCTCTTTCCTCTCCGACCAGCCTTCCTCCTGCTGCAGCCGGGCATCCGCGTCGTGAAGGCGTTCCG 3522
