Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10731
- Subject:
- NM_001812.4
- Aligned Length:
- 2831
- Identities:
- 1623
- Gaps:
- 1207
Alignment
Query 1 ATGGCTGCGTCCGGTCTGGATCATCTCAAAAATGGCTACAGAAGAAGATTTTGTCGACCTTCCAGGGCACGTGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCTGCGTCCGGTCTGGATCATCTCAAAAATGGCTACAGAAGAAGATTTTGTCGACCTTCCAGGGCACGTGA 74
Query 75 CATTAACACAGAGCAAGGCCAGAATGTTCTGGAAATCTTACAAGACTGTTTTGAAGAAAAAAGTCTTGCCAATG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CATTAACACAGAGCAAGGCCAGAATGTTCTGGAAATCTTACAAGACTGTTTTGAAGAAAAAAGTCTTGCCAATG 148
Query 149 ATTTTAGTACAAATTCTACAAAATCAGTGCCTAATTCAACACGCAAAATAAAAGACACTTGTATTCAGTCACCA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATTTTAGTACAAATTCTACAAAATCAGTGCCTAATTCAACACGCAAAATAAAAGACACTTGTATTCAGTCACCA 222
Query 223 AGCAAAGAGTGCCAGAAATCACATCCAAAGTCAGTTCCAGTTTCTTCAAAGAAGAAAGAAGCCTCTCTACAGTT 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGCAAAGAGTGCCAGAAATCACATCCAAAGTCAGTTCCAGTTTCTTCAAAGAAGAAAGAAGCCTCTCTACAGTT 296
Query 297 TGTTGTAGAACCAAGTGAAGCCACAAACAGATCAGTTCAGGCCCATGAAGTTCATCAGAAAATTCTGGCAACTG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGTTGTAGAACCAAGTGAAGCCACAAACAGATCAGTTCAGGCCCATGAAGTTCATCAGAAAATTCTGGCAACTG 370
Query 371 ATGTTAGTTCCAAAAATACACCTGACTCGAAAAAAATATCAAGTAGAAACATAAATGATCATCACAGTGAAGCT 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATGTTAGTTCCAAAAATACACCTGACTCGAAAAAAATATCAAGTAGAAACATAAATGATCATCACAGTGAAGCT 444
Query 445 GATGAAGAATTTTACTTATCCGTTGGCTCACCTTCTGTTCTTTTGGATGCAAAAACATCTGTATCACAAAATGT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GATGAAGAATTTTACTTATCCGTTGGCTCACCTTCTGTTCTTTTGGATGCAAAAACATCTGTATCACAAAATGT 518
Query 519 TATTCCATCTAGTGCCCAAAAGAGAGAGACTTACACTTTTGAAAATTCAGTAAATATGCTGCCTTCAAGTACAG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TATTCCATCTAGTGCCCAAAAGAGAGAGACTTACACTTTTGAAAATTCAGTAAATATGCTGCCTTCAAGTACAG 592
Query 593 AGGTTTCAGTTAAAACCAAAAAAAGGTTAAACTTTGATGATAAAGTTATGTTAAAGAAAATAGAAATAGATAAT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AGGTTTCAGTTAAAACCAAAAAAAGGTTAAACTTTGATGATAAAGTTATGTTAAAGAAAATAGAAATAGATAAT 666
Query 667 AAAGTATCAGATGAAGAGGATAAAACATCGGAAGGACAAGAAAGAAAACCATCAGGATCATCTCAGAATAGAAT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAAGTATCAGATGAAGAGGATAAAACATCGGAAGGACAAGAAAGAAAACCATCAGGATCATCTCAGAATAGAAT 740
Query 741 ACGAGATTCAGAATATGAAATTCAACGACAAGCTAAAAAAAGTTTTTCAACATTGTTTTTAGAAACAGTAAAAC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACGAGATTCAGAATATGAAATTCAACGACAAGCTAAAAAAAGTTTTTCAACATTGTTTTTAGAAACAGTAAAAC 814
Query 815 GAAAAAGTGAATCCAGTCCCATTGTTAGGCATGCGGCAACTGCTCCACCTCATTCGTGTCCTCCCGATGATACG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GAAAAAGTGAATCCAGTCCCATTGTTAGGCATGCGGCAACTGCTCCACCTCATTCGTGTCCTCCCGATGATACG 888
Query 889 AAGTTGATAGAGGATGAATTTATAATTGATGAGTCGGATCAAAGTTTTGCCAGTAGATCTTGGATTACAATACC 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AAGTTGATAGAGGATGAATTTATAATTGATGAGTCGGATCAAAGTTTTGCCAGTAGATCTTGGATTACAATACC 962
Query 963 AAGAAAGGCAGGGTCTCTGAAACAACGCACAATATCCCCGGCTGAGAGCACTGCACTCCTTCAAGGTAGAAAGT 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AAGAAAGGCAGGGTCTCTGAAACAACGCACAATATCCCCGGCTGAGAGCACTGCACTCCTTCAAGGTAGAAAGT 1036
Query 1037 CAAGAGAAAAGCATCATAATATATTACCTAAGACTTTGGCAAATGACAAACATTCCCATAAACCTCACCCAGTA 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CAAGAGAAAAGCATCATAATATATTACCTAAGACTTTGGCAAATGACAAACATTCCCATAAACCTCACCCAGTA 1110
Query 1111 GAGACATCTCAGCCCTCTGATAAAACAGTACTGGATACAAGTTATGCTTTGATAGGTGAAACAGTAAATAATTA 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GAGACATCTCAGCCCTCTGATAAAACAGTACTGGATACAAGTTATGCTTTGATAGGTGAAACAGTAAATAATTA 1184
Query 1185 TAGATCTACAAAATATGAAATGTATTCCAAGAATGCAGAAAAACCATCTAGAAGCAAAAGGACTATAAAACAAA 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TAGATCTACAAAATATGAAATGTATTCCAAGAATGCAGAAAAACCATCTAGAAGCAAAAGGACTATAAAACAAA 1258
Query 1259 AACAGAGAAGAAAATTCATGGCTAAACCAGCTGAAGAACAGCTTGATGTGGGACAGTCTAAAGATGAAAACATA 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AACAGAGAAGAAAATTCATGGCTAAACCAGCTGAAGAACAGCTTGATGTGGGACAGTCTAAAGATGAAAACATA 1332
Query 1333 CATACATCACATATTACCCAAGACGAATTTCAAAGAAATTCAGACAGAAATATGGAAGAGCATGAAGAGATGGG 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CATACATCACATATTACCCAAGACGAATTTCAAAGAAATTCAGACAGAAATATGGAAGAGCATGAAGAGATGGG 1406
Query 1407 AAATGATTGTGTTTCCAAAAAACAGATGCCACCTGTGGGAAGCAAGAAAAGTAGCACTAGAAAAGATAAGGAAG 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AAATGATTGTGTTTCCAAAAAACAGATGCCACCTGTGGGAAGCAAGAAAAGTAGCACTAGAAAAGATAAGGAAG 1480
Query 1481 AATCTAAAAAGAAGCGCTTTTCCAGTGAGTCCAAGAACAAACTTGTACCTGAAGAAGTGACTTCAACTGTCACG 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AATCTAAAAAGAAGCGCTTTTCCAGTGAGTCCAAGAACAAACTTGTACCTGAAGAAGTGACTTCAACTGTCACG 1554
Query 1555 AAAAGTCGAAGAATTTCCAGGCGTCCATCTGATTGGTGGGTGGTAAAATCAGAGGAGAGTTGCCT--------- 1619
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1555 AAAAGTCGAAGAATTTCCAGGCGTCCATCTGATTGGTGGGTGGTAAAATCAGAGGAGAGT--CCTGTTTATAGC 1626
Query 1620 -------------GAAATGC------------------------------------------------------ 1626
||||||.
Sbjct 1627 AATTCTTCAGTAAGAAATGAATTACCAATGCATCACAATAGTAGCCGAAAATCTACTAAGAAAACAAATCAGTC 1700
Query 1627 -------------------------------------------------------------------------- 1626
Sbjct 1701 ATCTAAGAATATTAGGAAAAAAACTATTCCACTTAAAAGGCAGAAGACAGCAACTAAAGGCAACCAAAGAGTAC 1774
Query 1627 -------------------------------------------------------------------------- 1626
Sbjct 1775 AGAAGTTTTTAAATGCTGAAGGTTCTGGAGGTATCGTTGGTCATGATGAAATTTCCAGATGTTCGCTGAGTGAG 1848
Query 1627 -------------------------------------------------------------------------- 1626
Sbjct 1849 CCATTGGAAAGTGATGAGGCAGACTTGGCTAAGAAGAAAAATCTTGATTGTTCTAGATCTACAAGAAGCTCAAA 1922
Query 1627 -------------------------------------------------------------------------- 1626
Sbjct 1923 GAATGAAGATAACATTATGACTGCACAGAATGTTCCCCTAAAGCCTCAGACCAGTGGATATACATGTAATATAC 1996
Query 1627 -------------------------------------------------------------------------- 1626
Sbjct 1997 CAACAGAGTCAAACTTGGATTCTGGAGAGCATAAGACTTCAGTTTTAGAGGAAAGTGGACCTTCCAGGCTCAAT 2070
Query 1627 -------------------------------------------------------------------------- 1626
Sbjct 2071 AATAATTATTTAATGTCTGGAAAGAATGATGTGGATGATGAGGAAGTTCATGGAAGTTCAGATGACTCAAAACA 2144
Query 1627 -------------------------------------------------------------------------- 1626
Sbjct 2145 ATCTAAAGTGATACCAAAGAACAGAATCCATCACAAACTAGTATTGCCCTCCAACACACCAAATGTTCGCAGGA 2218
Query 1627 -------------------------------------------------------------------------- 1626
Sbjct 2219 CCAAGAGAACACGTTTGAAACCTTTGGAGTACTGGCGAGGAGAGCGAATAGATTATCAAGGAAGGCCATCAGGA 2292
Query 1627 -------------------------------------------------------------------------- 1626
Sbjct 2293 GGATTCGTGATTAGTGGAGTACTATCTCCAGACACAATATCGTCTAAAAGGAAGGCAAAAGAAAATATTGGAAA 2366
Query 1627 -------------------------------------------------------------------------- 1626
Sbjct 2367 AGTCAACAAAAAATCTAATAAGAAAAGGATCTGTCTTGATAACGATGAAAGAAAGACTAACTTAATGGTAAATC 2440
Query 1627 -------------------------------------------------------------------------- 1626
Sbjct 2441 TAGGTATACCTCTTGGAGATCCTTTGCAGCCAACGAGGGTAAAGGACCCAGAAACAAGAGAGATTATTCTCATG 2514
Query 1627 -------------------------------------------------------------------------- 1626
Sbjct 2515 GATCTTGTAAGGCCACAAGATACATATCAATTTTTTGTTAAGCATGGTGAGTTGAAGGTATACAAGACATTGGA 2588
Query 1627 -------------------------------------------------------------------------- 1626
Sbjct 2589 TACACCCTTTTTTTCTACTGGGAAATTGATATTAGGACCACAAGAAGAAAAGGGAAAGCAGCATGTTGGCCAGG 2662
Query 1627 -------------------------------------------------------------------------- 1626
Sbjct 2663 ATATATTGGTTTTTTATGTTAACTTTGGTGACCTTTTGTGTACTTTACATGAAACACCTTATATATTAAGTACT 2736
Query 1627 -------------------------------------------------------------------------- 1626
Sbjct 2737 GGGGATTCGTTCTATGTTCCTTCAGGTAACTATTATAACATCAAAAATCTCCGGAATGAGGAAAGTGTTCTTCT 2810
Query 1627 ------------------- 1626
Sbjct 2811 TTTTACTCAGATAAAAAGA 2829
