Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10736
- Subject:
- XR_001740001.1
- Aligned Length:
- 2874
- Identities:
- 1080
- Gaps:
- 1793
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTCTGCTCTCGGCCTCCCGGGCTGCGGGGACGGGACGGCTGCCGGCGCGGACTTTGCGGGCCGGGAGCCGAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCAGGACAGAGCCGGAACCGCCGAGGGAGGCGAGAGGGCAGTGCGCGGAGATGGCGGCCGCGGCGGCGGAGGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGATGGAGCCACGGGCGCTGCAGTACGAGCAGACCCTGATGTATGGCCGGTACACTCAGGACCTTGGGGCCTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGCCAAAGAGGAAGCTGCTCGGATTCGCCTGGGAGGGCCTGAACCCTGGAAAGGTCCCCCTTCCTCTCGGGCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCCAGAGCTCTTGGAATATGGACGGAGCCGTTGCGCCCGATGCCGCGTCTGTTCTGTCCGCTGCCACAAGTTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTAGTATCCAGGGTTGGTGAAGATTGGATCTTCCTGGTCCTGCTGGGGCTTCTCATGGCATTGGTCAGCTGGGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATGGACTATGCCATTGCTGCCTGTCTGCAAGCCCAGCAGTGGATGTCCCGGGGCTTGAACACCAGCATCTTGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCCAGTACCTGGCCTGGGTCACCTACCCTGTTGTCCTCATCACTTTCTCAGCCGGATTCACACAGATCCTGGCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCTCAGGCTGTCGGCTCTGGCATCCCTGAGATGAAGACCATCTTGCGGGGAGTGGTGCTGAAAGAATACCTCAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACTCAAGACCTTTATAGCTAAGGTCATTGGGCTGACCTGCGCCCTAGGCAGCGGGATGCCGCTTGGCAAAGAGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCCTTTTGTGCATATCGCAAGCATGTGTGCTGCCCTTCTCAGCAAGTTCCTCTCCCTCTTTGGGGGTATCTAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGAATGAATCCCGGAACACAGAGATGCTGGCTGCCGCCTGTGCCGTGGGGGTGGGCTGCTGCTTCGCGGCACC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TATTGGAGGCGTCCTCTTCAGCATCGAGGTCACCTCCACCTTCTTTGCAGTGCGGAACTACTGGCGGGGCTTCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCGCTGCCACCTTCAGTGCCTTCATCTTCCGGGTCTTGGCAGTCTGGAACCGGGATGAAGAGACTATTACAGCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTCTTCAAAACCCGATTCCGGCTCGACTTCCCCTTTGACCTGCAGGAGCTGCCAGCCTTTGCTGTCATTGGTAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGCTAGTGGCTTCGGTGGAGCCCTCTTTGTCTACCTGAACCGGAAGATTGTCCAGGTGATGCGGAAGCAGAAAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCATCAATCGCTTCCTCATGAGGAAACGCCTGCTCTTCCCGGCTCTGGTGACCCTGCTCATCTCCACGCTGACC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTCCCCCCTGGCTTTGGACAGTTCATGGCTGGACAGCTCTCACAGAAAGAGACGCTGGTCACCCTGTTTGACAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCGGACGTGGGTCCGCCAGGGCCTGGTGGAGGAGCTAGAACCACCCAGCACCTCACAGGCCTGGAACCCACCAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GTGCCAACGTCTTCCTCACCCTGGTCATCTTCATTCTCATGAAGTTCTGGATGTCTGCACTGGCCACCACCATC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCAGTTCCCTGTGGGGCCTTCATGCCTGTCTTTGTCATTGTGCCCCCTGCCCTCCCCCTCCACTGCCTCTTTCT 1554
Query 1 ------------------------------------------------------ATGGCTGCCTGGTTCCCAGA 20
||||||||||||||||||||
Sbjct 1555 CTTCCCACCCCCCTCCCTGAAGGAGCAGCATTTGGGCGTCTGGTGGGTGAAAGCATGGCTGCCTGGTTCCCAGA 1628
Query 21 TGGAATTCATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGGTCGGGGCAGCTGCGCTGG 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TGGAATTCATACGGACAGCAGCACCTACCGGATTGTGCCTGGGGGCTACGCTGTGGTCGGGGCAGCTGCGCTGG 1702
Query 95 CAGGAGCGGTGACACACACAGTGTCCACGGCTGTGATCGTGTTCGAGCTCACAGGCCAGATTGCCCACATCCTG 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CAGGAGCGGTGACACACACAGTGTCCACGGCTGTGATCGTGTTCGAGCTCACAGGCCAGATTGCCCACATCCTG 1776
Query 169 CCTGTCATGATCGTCGTCATCCTGGCCAACGCTGTCGCCCAGAGTCTGCAGCCCTCCCTCTATGACAGCATCAT 242
|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CCTGTCATGATCGCCGTCATCCTGGCCAACGCTGTCGCCCAGAGTCTGCAGCCCTCCCTCTATGACAGCATCAT 1850
Query 243 CCGAATCAAGAAACTGCCCTACCTGCCTGAGCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGG 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CCGAATCAAGAAACTGCCCTACCTGCCTGAGCTCGGCTGGGGCCGCCACCAGCAGTACCGGGTGCGTGTGGAGG 1924
Query 317 ACATCATGGTGCGGGATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGG 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 ACATCATGGTGCGGGATGTTCCCCATGTGGCCCTCAGCTGCACCTTCCGGGACCTGCGTTTGGCACTGCACAGG 1998
Query 391 ACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGAGTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACA 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 ACCAAGGGCCGAATGCTGGCCCTAGTGGAGTCCCCTGAGTCCATGATTCTGCTGGGCTCCATCGAGCGTTCACA 2072
Query 465 GGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCC 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GGTGGTGGCATTGTTGGGGGCCCAGCTGAGCCCAGCCCGCCGGCGGCAGCACATGCAGGAGCGCAGAGCCACCC 2146
Query 539 AGACCTCTCCACTATCTGATCAGGAGGGTCCCCCTACCCCTGAGGCTTCTGTCTGCTTCCAGGTGAACACAGAA 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 AGACCTCTCCACTATCTGATCAGGAGGGTCCCCCTACCCCTGAGGCTTCTGTCTGCTTCCAGGTGAACACAGAA 2220
Query 613 GACTCAGCCTTCCCAGCAGCCCGGGGGGAGACCCACAAGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGT 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GACTCAGCCTTCCCAGCAGCCCGGGGGGAGACCCACAAGCCCCTAAAGCCTGCACTCAAGAGGGGGCCCAGTGT 2294
Query 687 CACCAGGAACCTCGGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTG 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CACCAGGAACCTCGGAGAGAGTCCCACAGGGAGCGCAGAGTCGGCAGGCATCGCCCTCCGGAGCCTCTTCTGTG 2368
Query 761 GCAGTCCACCCCCTGAGGCTGCTTCGGAGAAGTTGGAATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCCGAATC 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 GCAGTCCACCCCCTGAGGCTGCTTCGGAGAAGTTGGAATCCTGTGAGAAGCGCAAGCTGAAGCGTGTCCGAATC 2442
Query 835 TCCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCCCTGAAG---------------------------- 880
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 TCCCTGGCAAGTGACGCGGACCTGGAAGGCGAGATGAGCCCTGAAGAGATTCTGGAGTGGGAGGAGCAGCAACT 2516
Query 881 -------------------------------------------------------------------------- 880
Sbjct 2517 AGATGAACCTGTCAACTTCAGTGACTGCAAAATTGATCCTGCTCCCTTCCAGCTGGTGGAGCGGACCTCTTTGC 2590
Query 881 ---AGACTCACACTATCTTCTCACTGCTGGGAGTGGACCATGCTTATGTCACCAGTATTGGCAGACTCATTGGA 951
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 ACAAGACTCACACTATCTTCTCACTGCTGGGAGTGGACCATGCTTATGTCACCAGTATTGGCAGACTCATTGGA 2664
Query 952 ATCGTTACTCTAAAGGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCC 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 ATCGTTACTCTAAAGGAGCTCCGGAAGGCCATCGAGGGCTCTGTCACAGCACAGGGTGTGAAAGTCCGGCCGCC 2738
Query 1026 CCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGGAGACCACTGAGGTGCATGCACTCTGGGGGC 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 CCTCGCCAGCTTCCGAGACAGTGCCACCAGCAGCAGTGACACGGAGACCACTGAGG------------------ 2794
Query 1100 CCCACTCCCGTCATGGCCTCCCCCGGGAGGGCAGCCCTTCCGACAGCGACGACAAATGCCAA 1161
Sbjct 2795 -------------------------------------------------------------- 2794
