Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10747
- Subject:
- NR_027928.2
- Aligned Length:
- 4298
- Identities:
- 1695
- Gaps:
- 2602
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAGATCTGCGGAATTCGGCCTTCGGAAAGAGCCCCCGGGCCGGGGCACGGAGAGAGCCGAGCGCCGCAGCCGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGCCGAATAGAGCCGGAGAGACCCGAGTATGACCGGAGAAGCCCAGGCCGGCCGGAAGAGGAGCCGAGCGCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGGAAGGAACCGAGCCCGTCCGAAGGGAGCGGAGCGCAGCCTGGCCTGGGGCCCGGTCGAGCCCGCGCCATGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGCCGAGGCGACAGCTGTGGCCGGAAGCGGGGCTGTTGGCGGCTGCCTGGCCAAAGACGGCTTGCAGCAGTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAGTGCCCGGACACTACCCCAAAACGGCGGCGCGCCTCGTCGCTGTCGCGTGACGCCGAGCGCCGAGCCTACCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGGTGCCGGGAGTACTTGGGCGGGGCCTGGCGCCGAGTGCAGCCCGAGGAGCTGAGGGTTTACCCCGTGAGCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGGCCTCAGCAACCTGCTCTTCCGCTGCTCGCTCCCGGACCACCTGCCCAGCGTTGGCGAGGAGCCCCGGGAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTGCTTCTGCGGCTGTACGGAGCCATCTTGCAGGGCGTGGACTCCCTGGTGCTAGAAAGCGTGATGTTCGCCAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACTTGCGGAGCGGTCGCTGGGGCCCCAGCTGTACGGAGTCTTCCCAGAGGGCCGGCTGGAACAGTACATCCCAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTCGGCCATTGAAAACTCAAGAGCTTCGAGAGCCAGTGTTGTCAGCAGCCATTGCCACGAAGATGGCGCAATTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATGGCATGGAGATGCCTTTCACCAAGGAGCCCCACTGGCTGTTTGGGACCATGGAGCGGTACCTAAAACAGAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCAGGACCTGCCCCCAACTGGCCTCCCTGAGATGAACCTGCTGGAGATGTACAGCCTGAAGGATGAGATGGGCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACCTCAGGAAGTTACTAGAGTCTACCCCATCGCCAGTCGTCTTCTGCCACAATGACATCCAGGAAGGGAACATC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTGCTGCTCTCAGAGCCAGAAAATGCTGACAGCCTCATGCTGGTGGACTTCGAGTACAGCAGTTATAACTATAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGGCTTTGACATTGGGAACCATTTTTGTGAGTGGGTTTATGATTATACTCACGAGGAATGGCCTTTCTACAAAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAAGGCCCACAGACTACCCCACTCAAGAACAGCAGTTGCATTTTATTCGTCATTACCTGGCAGAGGCAAAGAAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGTGAGACCCTCTCCCAAGAGGAGCAGAGAAAACTGGAAGAAGATTTGCTGGTAGAAGTCAGTCGGTATGCTCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GGCATCCCATTTCTTCTGGGGTCTGTGGTCCATCCTCCAGGCATCCATGTCCACCATAGAATTTGGTTACTTGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACTATGCCCAGTCTCGGTTCCAGTTCTACTTCCAGCAGAAGGGGCAGCTGACCAGTGTCCACTCCTCATCCTGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTCCACCCTCCCACTCCTTGGATTTCTCCTGGAGCCTCCAGGGCAGGACCTTGGAGGGAGGAACAACGAGCAGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGGCCCTGGCGACTGGGCTGAGCCCCCAAGTGAAACTGAGGTTCAGGAGACCGGCCTGTTCCTGAGTTTGAGTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCGACCAACCCCCAGGATGGCGGAAGCTCACCAGGCCGTGGCCTTCCAGTTCACGGTGACCCCAGACGGGGTCG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ACTTCCGGCTCAGTCGGGAGGCCCTGAAACACGTCTACCTGTCTGGGATCAACTCCTGGAAGAAACGCCTGATC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CGCATCAAGAATGGCATCCTCAGGGGCGTGTACCCTGGCAGCCCCACCAGCTGGCTGGTCGTCATCATGGCAAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGTGGGTTCCTCCTTCTGCAACGTGGACATCTCCTTGGGGCTGGTCAGTTGCATCCAGAGATGCCTCCCTCAGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGTGTGGCCCCTACCAGACCCCGCAGACCCGGGCACTTCTCAGCATGGCCATCTTCTCCACGGGCGTCTGGGTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACGGGCATCTTCTTCTTCCGCCAAACCCTGAAGCTGCTTCTCTGCTACCATGGGTGGATGTTTGAGATGCATGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CAAGACCAGCAACTTGACCAGGATCTGGGCTATGTGTATCCGCCTTCTATCCAGCCGGCACCCTATGCTCTACA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCTTCCAGACATCTCTGCCCAAGCTTCCTGTGCCCAGGGTGTCAGCCACAATTCAGCGGTACCTAGAGTCTGTG 2146
Query 1 ---------------------------------ATGGAGTTGCTGGCCAAAGAATTCCAGGACAAGACTGCCCC 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CGCCCCTTGTTGGATGATGAGGAATATTACCGCATGGAGTTGCTGGCCAAAGAATTCCAGGACAAGACTGCCCC 2220
Query 42 CAGGCTGCAGAAATACCTGGTGCTCAAGTCATGGTGGGCAAGTAACTATGTGAGTGACTGGTGGGAAGAGTACA 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 CAGGCTGCAGAAATACCTGGTGCTCAAGTCATGGTGGGCAAGTAACTATGTGAGTGACTGGTGGGAAGAGTACA 2294
Query 116 TCTACCTTCGAGGCAGGAGCCCTCTCATGGTGAACAGCAACTATTATGTCATGGACCTTGTGCTCATCAAGAAT 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TCTACCTTCGAGGCAGGAGCCCTCTCATGGTGAACAGCAACTATTATGTCATGGACCTTGTGCTCATCAAGAAT 2368
Query 190 ACAGACGTGCAGGCAGCCCGCCTGGGAAACATCATCCACGCCATGATCATGTATCGCCGTAAACTGGACCGTGA 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 ACAGACGTGCAGGCAGCCCGCCTGGGAAACATCATCCACGCCATGATCATGTATCGCCGTAAACTGGACCGTGA 2442
Query 264 AGAAATCAAGCCTGTGATGGCACTGGGCATAGTGCCTATGTGCTCCTACCAGATGGAGAGGATGTTCAACACCA 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 AGAAATCAAGCCTGTGATGGCACTGGGCATAGTGCCTATGTGCTCCTACCAGATGGAGAGGATGTTCAACACCA 2516
Query 338 CTCGGATCCCGGGCAAGGACACAGATGTGCTACAGCACCTCTCAGACAGCCGGCACGTGGCTGTCTACCACAAG 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 CTCGGATCCCGGGCAAGGACACAGATGTGCTACAGCACCTCTCAGACAGCCGGCACGTGGCTGTCTACCACAAG 2590
Query 412 GGACGCTTCTTCAAGCTGTGGCTCTATGAGGGCGCCCGTCTGCTCAAGCCTCAGGATCTGGAGATGCAGTTCCA 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 GGACGCTTCTTCAAGCTGTGGCTCTATGAGGGCGCCCGTCTGCTCAAGCCTCAGGATCTGGAGATGCAGTTCCA 2664
Query 486 GAGGATCCTGGACGACCCCTCCCCACCTCAGCCTGGGGAGGAGAAGCTGGCAGCCCTCACTGCAGGAGGAAGGG 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 GAGGATCCTGGACGACCCCTCCCCACCTCAGCCTGGGGAGGAGAAGCTGGCAGCCCTCACTGCAGGAGGAAGGG 2738
Query 560 TGGAGTGGGCGCAGGCACGCCAGGCCTTCTTTAGCTCTGGAAAGAATAAGGCTGCCTTGGAGGCCATCGAGCGT 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 TGGAGTGGGCGCAGGCACGCCAGGCCTTCTTTAGCTCTGGAAAGAATAAGGCTGCCTTGGAGGCCATCGAGCGT 2812
Query 634 GCCGCTTTCTTCGTGGCCCTGGATGAGGAATCCTACTCCTATGACCCCGAAGATGAGGCCAGCCTCAGCCTCTA 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 GCCGCTTTCTTCGTGGCCCTGGATGAGGAATCCTACTCCTATGACCCCGAAGATGAGGCCAGCCTCAGCCTCTA 2886
Query 708 TGGCAAGGCCCTGCTACATGGCAACTGCTACAACAGGTGGTTTGACAAATCCTTCACTCTCATTTCCTTCAAGA 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 TGGCAAGGCCCTGCTACATGGCAACTGCTACAACAGGTGGTTTGACAAATCCTTCACTCTCATTTCCTTCAAGA 2960
Query 782 ATGGCCAGTTGGGTCTCAATGCAGAGCATGCGTGGGCAGATGCTCCCATCATTGGGCACCTCTGGGAGTTTGTC 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 ATGGCCAGTTGGGTCTCAATGCAGAGCATGCGTGGGCAGATGCTCCCATCATTGGGCACCTCTGGGAGTTTGTC 3034
Query 856 CTGGGCACAGACAGCTTCCACCTGGGCTACACGGAGACCGGGCACTGCCTGGGCAAACCGAACCCTGCGCTCGC 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 CTGGGCACAGACAGCTTCCACCTGGGCTACACGGAGACCGGGCACTGCCTGGGCAAACCGAACCCTGCGCTCGC 3108
Query 930 ACCTCCTACACGGCTGCAGTGGGACATTCCAAAA------CAGGCGGTCATCAAGAGTTCCTACCAGGTGGCCA 997
|||||||||||||||||||||||||||||||||| ||||||||||||.|||||||||||||||||||||
Sbjct 3109 ACCTCCTACACGGCTGCAGTGGGACATTCCAAAACAGTGCCAGGCGGTCATCGAGAGTTCCTACCAGGTGGCCA 3182
Query 998 AGGCGTTGGCAGACGACGTGGAGTTGTACTGCTTCCAGTTCCTGCCCTTTGGCAAAGGCCTCATCAAGAAGTGC 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 AGGCGTTGGCAGACGACGTGGAGTTGTACTGCTTCCAGTTCCTGCCCTTTGGCAAAGGCCTCATCAAGAAGTGC 3256
Query 1072 CGGACCAGCCCTGATGCCTTTGTGCAGATCGCGCTGCAGCTGGCTCACTTCCGGGACAGGGGTAAGTTCTGCCT 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 3257 CGGACCAGCCCTGATGCCTTTGTGCAGATCGCGCTGCAGCTGGCTCACTTCCG-----GGGGTAAGTTCTGCCT 3325
Query 1146 GACCTATGAGGCCTCAATGACCAGAATGTTCCGGGAGGGACGGACTGAGACTGTGCGTTCCTGTACCAGCGAGT 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3326 GACCTATGAGGCCTCAATGACCAGAATGTTCCGGGAGGGACGGACTGAGACTGTGCGTTCCTGTACCAGCGAGT 3399
Query 1220 CCACAGCCTTTGTGCAGGCCATGATGGAGGGGTCCCACACAAAAGCAGACCTGCGAGATCTCTTCCAGAAGGCT 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3400 CCACAGCCTTTGTGCAGGCCATGATGGAGGGGTCCCACACAAAAGCAGACCTGCGAGATCTCTTCCAGAAGGCT 3473
Query 1294 GCTAAGAAGCACCAGAATATGTACCGCCTGGCCATGACCGGGGCAGGGATCGACAGGCACCTCTTCTGCCTTTA 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3474 GCTAAGAAGCACCAGAATATGTACCGCCTGGCCATGACCGGGGCAGGGATCGACAGGCACCTCTTCTGCCTTTA 3547
Query 1368 CTTGGTCTCCAAGTACCTAGGAGTCAGCTCTCCTTTCCTTGCTGAGGTGCTCTCGGAACCCTGGCGTCTCTCCA 1441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3548 CTTGGTCTCCAAGTACCTAGGAGTCAGCTCTCCTTTCCTTGCTGAGGTGCTCTCGGAACCCTGGCGTCTCTCCA 3621
Query 1442 CCAGCCAGATCCCCCAATCCCAGATCCGCATGTTCGACCCAGAGCAGCACCCCAATCACCTGGGCGCTGGAGGT 1515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3622 CCAGCCAGATCCCCCAATCCCAGATCCGCATGTTCGACCCAGAGCAGCACCCCAATCACCTGGGCGCTGGAGGT 3695
Query 1516 GGCTTTGGCCCTGTAGCAGATGATGGCTATGGAGTTTCCTACATGATTGCAGGCGAGAACACGATCTTCTTCCA 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3696 GGCTTTGGCCCTGTAGCAGATGATGGCTATGGAGTTTCCTACATGATTGCAGGCGAGAACACGATCTTCTTCCA 3769
Query 1590 CATCTCCAGCAAGTTCTCAAGCTCAGAGACGAACGCCCAGCGCTTTGGAAACCACATCCGCAAAGCCCTGCTGG 1663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3770 CATCTCCAGCAAGTTCTCAAGCTCAGAGACGAACGCCCAGCGCTTTGGAAACCACATCCGCAAAGCCCTGCTGG 3843
Query 1664 ACATTGCTGATCTTTTCCAAGTTCCCAAGGCCTACAGC------------------------------------ 1701
||||||||||||||||||||||||||||||||||||||
Sbjct 3844 ACATTGCTGATCTTTTCCAAGTTCCCAAGGCCTACAGCTGAAGGTTGGAGAAATGCCAGCTGCCCTTTCGTCCC 3917
Query 1702 -------------------------------------------------------------------------- 1701
Sbjct 3918 CACACTGTGGAGGAAGGGACCTGTGGCAGCTCACAGGCATGAGGGGTGGCCGTGCACAGGTGCCCAGGCTCCAA 3991
Query 1702 -------------------------------------------------------------------------- 1701
Sbjct 3992 GGACAGCTCCGGCAGCAGGTCCTCGCTGGGCAGATGCTGCTCCCTGAGGGCCCAGGTGGTGGAGCCCTTAGGTA 4065
Query 1702 -------------------------------------------------------------------------- 1701
Sbjct 4066 CCTGTGTTTTGTTTGGGAACTCGGAGGCCCTCCCCCTCCCCCAGCTCAGACCACAGAGGTGGCAAGAGAAGGGC 4139
Query 1702 -------------------------------------------------------------------------- 1701
Sbjct 4140 TGAAGCTGGAAGACTGTTCATGAGGGACTTGTGTGACCTGCTTTGAAATGTGTGACTCTGCTGAGTGACGTAGG 4213
Query 1702 -------------------------------------------------------------------------- 1701
Sbjct 4214 CTCTGAGATAGCTGTCCACGCCCACGTGTTTGCTTGGAATAAATACTTGCCTCAGAACCTTCAAAAAAAAAAAA 4287
Query 1702 ------ 1701
Sbjct 4288 AAAAAA 4293
