Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10749
- Subject:
- NR_045768.2
- Aligned Length:
- 4361
- Identities:
- 626
- Gaps:
- 3734
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCAGTCCGATCTCGCGAGAGAGGACGGAAGCCTGTGGGAGCCCGTGGCCTTTAAAGTGCCGTTCAGCCTTTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCCAGGGGTGCTTTGTAAACACGGCTGTGCTCAGGGCTCGCGGGTGACCGAAAGGATCATGAACTAGTGACCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAAAGGGTACTAGATGGAAACTTGAGAAAGGACTGCTTATTGATAACAGCTAAGGTATTCCTGGAAGCAGAGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAATAAAGCTCATGGCCCACCAGCTAGAAAGATTTCCTGAAGAGGTAGTCTGATTGGCTTAACTCGTATTCTTG 296
Query 1 -----------------------------------ATGAAATTCAAGTTACATGTGAATTCTGCCAGGCAATAC 39
|||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCATGAGAAAAAGAATGTGATAAGTTATTCAACTTATGAAATTCAAGTTACATGTGAATTCTGCCAGGCAATAC 370
Query 40 AAGGACCTGTGGAATATGAGTGATGACAAACCCTTTCTATGTACTGCGCCTGGATGTGGCCAGCGTTTTACCAA 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAGGACCTGTGGAATATGAGTGATGACAAACCCTTTCTATGTACTGCGCCTGGATGTGGCCAGCGTTTTACCAA 444
Query 114 CGAGGATCATTTGGCTGTCCATAAACATAAACATGAGATGACACTGAAATTTGGTCCAGCACGTAATGACAGTG 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CGAGGATCATTTGGCTGTCCATAAACATAAACATGAGATGACACTGAAATTTGGTCCAGCACGTAATGACAGTG 518
Query 188 TCATTGTGGCTGATCAGACCCCAACACCAACAAGATTCTTGAAAAACTGTGAAGAAGTGGGTTTGTTTAATGAG 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TCATTGTGGCTGATCAGACCCCAACACCAACAAGATTCTTGAAAAACTGTGAAGAAGTGGGTTTGTTTAATGAG 592
Query 262 TTGGCGAGTCCATTTGAGAATGAATTCAAGAAAGCTTCAGAAGATGACATTAAAAAAATGCCTCTAGATTTATC 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TTGGCGAGTCCATTTGAGAATGAATTCAAGAAAGCTTCAGAAGATGACATTAAAAAAATGCCTCTAGATTTATC 666
Query 336 CCCTCTTGCAACACCTATCATAAGAAGCAAAATTGAGGAGCCTTCTGTTGTAGAAACAACTCACCAGGATAGTC 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCCTCTTGCAACACCTATCATAAGAAGCAAAATTGAGGAGCCTTCTGTTGTAGAAACAACTCACCAGGATAGTC 740
Query 410 CTTTACCTCACCCAGAGTCTACTACCAGTGATGAGAAGGAAGTACCATTGGCACAAACTGCACAGCCCACATCA 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CTTTACCTCACCCAGAGTCTACTACCAGTGATGAGAAGGAAGTACCATTGGCACAAACTGCACAGCCCACATCA 814
Query 484 GCTATTGTTCGTCCAGCATCATTACAGGTTCCCAATGTGCTGCTTACAAGTTCTGACTCAAGTGTAATTATTCA 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GCTATTGTTCGTCCAGCATCATTACAGGTTCCCAATGTGCTGCTTACAAGTTCTGACTCAAGTGTAATTATTCA 888
Query 558 GCAGGCAGTACCTTCACCAACCTCAAGTACTGTAATCACCCAGGCACCATCCTCTAACAGGCCAATTGTG---- 627
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 889 GCAGGCAGTACCTTCACCAACCTCAAGTACTGTAATCACCCAGGCACCATCCTCTAACAGGCCAATTGTCCCTG 962
Query 628 -------------------------------------------------------------------------- 627
Sbjct 963 TACCAGGCCCATTTCCTCTTCTGTTACATCTTCCTAATGGACAAACCATGCCTGTTGCTATTCCTGCATCAATT 1036
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1037 ACAAGTTCTAATGTGCATGTTCCAGCTGCAGTCCCACTCGTTCGACCAGTCACCATGGTGCCTAGTGTTCCAGG 1110
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1111 AATCCCAGGTCCTTCCTCTCCCCAACCAGTACAGTCAGAAGCAAAAATGAGATTAAAAGCTGCTTTGACCCAGC 1184
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1185 AACATCCTCCAGTTACCAATGGTGATACTGTCAAAGGTCATGGTAGCGGATTGGTTAGGACTCAGTCAGAGGAA 1258
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1259 TCTCGACCGCAGTCATTACAACAGCCAGCCACATCCACTACAGAAACTCCGGCTTCTCCAGCTCACACAACTCC 1332
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1333 ACAGACCCAAAGTACAAGTGGTCGTCGGAGAAGAGCAGCTAACGAAGATCCTGATGAAAAAAGGAGAAAGTTTT 1406
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1407 TAGAGCGAAATAGAGCAGCAGCTTCAAGATGCCGACAAAAAAGGAAAGTCTGGGTTCAGTCTTTAGAGAAGAAA 1480
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1481 GCTGAAGACTTGAGTTCATTAAATGGTCAGCTGCAGTGAATATATTGCTCGTGAAAGGTGCCAGATTGACAGCT 1554
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1555 TTGGAAACTGAAGGACTCTAATTATCCACAGACCAGAGTGAAGTCACCCTGCTGAGAAATGAAGTGGCACAGCT 1628
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1629 GAAACAGCTTCTTCTGGCTCATAAAGATTGCCCTGTAACCGCCATGCAGAAGAAATCTGGCTATCATACAAATA 1702
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1703 TTTCTTCAGCTCTATTCCATAAGGCAGTGGGCACCCAGATGTTTCCATATGCATGGTTGTGCCTTCTTTTGACC 1776
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1777 TATTGCAGCTGCTGATAAAGATGATAGTTCAGAAGACATTTCAGTGCCGAGTAGTCCACATACAGAAGCTATAC 1850
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1851 AGCATAGTTCGGTCAGCACATCCAATGGAGTCAGTTCAACCTCCAAGGCAGAAGCTGTAGCCACTTCAGTCCTC 1924
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1925 ACCCAGATGGCGGACCAGAGTACAGAGCCTGCTCTTTCACAGATCGTTATGGCTCCTTCCTCCCAGTCACAGCC 1998
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1999 CTCAGGAAGTTGATTAAAAACCTGCAGTACAACAGTTTTAGATACTCATTAGTGACTTCAAAGGGAAATCAAGG 2072
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2073 AAAGACCAGTTTCCATTTATGCGAAATCTGTGGTTGTAAATTTTTTTTTTTTACTTGAAATTAAATTTGGCTCT 2146
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2147 AAAGTTGGTGTAGCAGCAGTTGATCAGACTGAAAAACGGTTTTTAGTCTCTGGAAAAAGACTGATTTTGCTTTT 2220
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2221 TTTATAAATATTATTAGATTTATTAATTTTTCTGTGCTCAATGTGTAAATTGTATTATAATTCATTGTGATTTA 2294
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2295 TTTCACTTTTAATTTGCTGGTGTTTTAATAAATGGGGGTGTTACTGAATCTTTCTTCCCACTTCCATTTCTTTT 2368
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2369 GACCACCCCTTAACCCTCAACTGTGACGGTAGTAGTATTATCATTTATACCAAAGTTTTGCATAGTCCCTGTTG 2442
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2443 ACTTTGTAATGTTAACGGAGTCATAAAAGCACTAGGCAAGAGAAAGATAGAAATTTGCTTTTAATCTTTTTGCC 2516
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2517 TTTTATTTTGCACATTATGCAAAAGGAAAAACATTAAAGAACACTTTTTTTTAAGTGAGTGAAAACATGGTAAA 2590
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2591 GACATACAGTGCTTTTATGCACATTGTTAAGCTAAATCAAGGTCATTTATAATCATTTTCCTTTTTTATTTAAG 2664
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2665 ATTTTAAGTAAACAAATTTTAGAATTTTCAGCATTTCAAAAATGATTTTATTTTTCAAGTCTTAAATTCAATAT 2738
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2739 TTTACACCTATGTTTTGAGGCTAAAAATATGAAATTATATAATGTATGATACAGGGTTATCAAATATCTAATAA 2812
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2813 TTTTTGAAATTAGCTCTTGTTTTTGGTTTTTTTGTTGTTGTTTTTACAGATTTCAGGTTACAAACTGCAAAGTT 2886
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2887 TATGCATAATTAAGTATGGTATGGTTGCCAGAAAAGCCTAAAATTACTACTTAGAAAATTTAAGACTGTTTACC 2960
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2961 CCCATTGTCTTGTACTTGCGAGCTAACTTGTACTATTCTTGTGAAAGCACTGTCATCTTTTAGTAGCAAATTTT 3034
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3035 GATAATGTTTCTCGTGGAAAAAAAAATCAGTATCTATCTTTAGAACAATGTAATTATAATGTGGGAAGTGTGCA 3108
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3109 TGAATGAGAGAGAGTGTGTGTGTATCTGTGTGTGTGTGCGCGTGTGTGTGTGTCTTTTAATAGTTTATGCCAGC 3182
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3183 AATCTTTGCTTGAATGTTTAACGATGCCTTCAGTGTGATGCTGGCCAATAGATGATTGCAGTTTAAAATGTCAT 3256
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3257 TATTGTGCAGGCTTGGATAACTAACATTCCATGATGTAGCTTGTTTCTGATGAGATGATTGTAGGTACATTTTT 3330
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3331 CTCATTATCCAATCATCTGTGGGATACTTAGTTTTCTAATGTGCCATTATCTATTTTTATTCTGCAGTTATGTT 3404
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3405 CAAAATACAGTACATATTTTAAAATAGAATAAATTGTTAAACATAAAATTTTAAAAGTAGTAGATGTGCGTAAG 3478
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3479 AAAACTTTGTAAAATAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCATTCAAGCAGGATTCCACTATGTAAA 3552
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3553 TATCTGTAATGCATTTATAATAAGTTGTGTAGTTTGTCCTGCATCCATACTACACTATTTGCTAAAGTCTCAGT 3626
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3627 GCCATCTCCTAATGAGACTGACATTTTAAAAGTCTGTATGGAATATCCTTGATAATTCAAGGAAATATCCCTCC 3700
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3701 TGCCTAAGTTCCAAACTGGGAAACATTCAAATTATATAAATGACATTTCAGGACTTTAAGTATGAAGATAATGG 3774
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3775 GAATTTTATTGTTTTGCTTTTTAAAATGAGAGCATTTTTATTTGATAATTTTTTTTAAATTTTTAATTTTTAAC 3848
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3849 TAATTTCATTATTTTAAAGTAATCAGTTTTTCAAATCATGATTTTGATATCATTATTCTAAGGAGTTATCTCAA 3922
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3923 AGGCACAAAATATGAATTCTGCAAGAAGGCTATTTTTTATTGTAGTTTGAATGGGTTAGGAAAAGCCTCAATTT 3996
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3997 TTCACTCTTAAGTCCTTCAGTACATTTTTCTTTCATCTTATTACTTATGCAAGTTAAGGTTCTTTGGTAACAGA 4070
Query 628 -------------------------------------------------------------------------- 627
Sbjct 4071 ATTCTTGCAACTGTAAAATAAAACTACATAGATGTAAGAAGTCATGTAAACGGTTAACAAGCTTACCAAGGTTA 4144
Query 628 -------------------------------------------------------------------------- 627
Sbjct 4145 GCAAAACTTTCATTGTAAATCAGTCTGTACTGAGCAAATAAAAATCATTATTAGTTGTATAAACACAAATTCCA 4218
Query 628 -------------------------------------------------------------------------- 627
Sbjct 4219 TTTTGACTTTCAGGATGTCATACTACTTCTGTACCTAGCATTTTCAGTCCTTATATTTGCAATGTTACACAAAC 4292
Query 628 --------------------------------------------------------------------- 627
Sbjct 4293 TGTACTATTTTCTTTTATGTGCAGTTTGCATGAGTAAACCATCAGAGAATAAATTCTATCTTTAAATTA 4361
