Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10749
- Subject:
- NR_045772.2
- Aligned Length:
- 4273
- Identities:
- 529
- Gaps:
- 3743
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCAGTCCGATCTCGCGAGAGAGGACGGAAGCCTGTGGGAGCCCGTGGCCTTTAAAGTGCCGTTCAGCCTTTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCCAGGGGTGCTTTGTAAACACGGCTGTGCTCAGGGCTCGCGGGTGACCGAAAGGATCATGAACTAGTGACCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAAAGGGTACTAGATGGAAACTTGAGAAAGGACTGCTTATTGATAACAGCTAAGGTATTCCTGGAAGCAGAGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAATAAAGCTCATGGCCCACCAGCTAGAAAGATTTCCTGAAGAGGTAGTCTGATTGGCTTAACTCGTATTCTTG 296
Query 1 -----------------------------------ATGAAATTCAAGTTACATGTGAATTCTGCCAGGCAATAC 39
|||||||||||||||||||||||||||||||||||||||
Sbjct 297 CCATGAGAAAAAGAATGTGATAAGTTATTCAACTTATGAAATTCAAGTTACATGTGAATTCTGCCAGGCAATAC 370
Query 40 AAGGACCTGTGGAATATGAGTGATGACAAACCCTTTCTATGTACTGCGCCTGGATGTGGCCAGCGTTTTACCAA 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAGGACCTGTGGAATATGAGTGATGACAAACCCTTTCTATGTACTGCGCCTGGATGTGGCCA------------ 432
Query 114 CGAGGATCATTTGGCTGTCCATAAACATAAACATGAGATGACACTGAAATTTGGTCCAGCACGTAATGACAGTG 187
Sbjct 433 -------------------------------------------------------------------------- 432
Query 188 TCATTGTGGCTGATCAGACCCCAACACCAACAAGATTCTTGAAAAACTGTGAAGAAGTGGGTTTGTTTAATGAG 261
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 433 -----------GATCAGACCCCAACACCAACAAGATTCTTGAAAAACTGTGAAGAAGTGGGTTTGTTTAATGAG 495
Query 262 TTGGCGAGTCCATTTGAGAATGAATTCAAGAAAGCTTCAGAAGATGACATTAAAAAAATGCCTCTAGATTTATC 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 496 TTGGCGAGTCCATTTGAGAATGAATTCAAGAAAGCTTCAGAAGATGACATTAAAAAAATGCCTCTAGATTTATC 569
Query 336 CCCTCTTGCAACACCTATCATAAGAAGCAAAATTGAGGAGCCTTCTGTTGTAGAAACAACTCACCAGGATAGTC 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 570 CCCTCTTGCAACACCTATCATAAGAAGCAAAATTGAGGAGCCTTCTGTTGTAGAAACAACTCACCAGGATAGTC 643
Query 410 CTTTACCTCACCCAGAGTCTACTACCAGTGATGAGAAGGAAGTACCATTGGCACAAACTGCACAGCCCACATCA 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 644 CTTTACCTCACCCAGAGTCTACTACCAGTGATGAGAAGGAAGTACCATTGGCACAAACTGCACAGCCCACATCA 717
Query 484 GCTATTGTTCGTCCAGCATCATTACAGGTTCCCAATGTGCTGCTTACAAGTTCTGACTCAAGTGTAATTATTCA 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 GCTATTGTTCGTCCAGCATCATTACAGGTTCCCAATGTGCTGCTTACAAGTTCTGACTCAAGTGTAATTATTCA 791
Query 558 GCAGGCAGTACCTTCACCAACCTCAAGTACTGTAATCACCCAGGCACCATCCTCTAACAGGCCAATTGTG---- 627
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 792 GCAGGCAGTACCTTCACCAACCTCAAGTACTGTAATCACCCAGGCACCATCCTCTAACAGGCCAATTGTCCCTG 865
Query 628 -------------------------------------------------------------------------- 627
Sbjct 866 TACCAGGCCCATTTCCTCTTCTGTTACATCTTCCTAATGGACAAACCATGCCTGTTGCTATTCCTGCATCAATT 939
Query 628 -------------------------------------------------------------------------- 627
Sbjct 940 ACAAGTTCTAATGTGCATGTTCCAGCTGCAGTCCCACTCGTTCGACCAGTCACCATGGTGCCTAGTGTTCCAGG 1013
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1014 AATCCCAGGTCCTTCCTCTCCCCAACCAGTACAGTCAGAAGCAAAAATGAGATTAAAAGCTGCTTTGACCCAGC 1087
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1088 AACATCCTCCAGTTACCAATGGTGATACTGTCAAAGGTCATGGTAGCGGATTGGTTAGGACTCAGTCAGAGGAA 1161
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1162 TCTCGACCGCAGTCATTACAACAGCCAGCCACATCCACTACAGAAACTCCGGCTTCTCCAGCTCACACAACTCC 1235
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1236 ACAGACCCAAAGTACAAGTGGTCGTCGGAGAAGAGCAGCTAACGAAGATCCTGATGAAAAAAGGAGAAAGTTTT 1309
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1310 TAGAGCGAAATAGAGCAGCAGCTTCAAGATGCCGACAAAAAAGGAAAGTCTGGGTTCAGTCTTTAGAGAAGAAA 1383
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1384 GCTGAAGACTTGAGTTCATTAAATGGTCAGCTGCAGTGAATATATTGCTCGTGAAAGGTGCCAGATTGACAGCT 1457
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1458 TTGGAAACTGAAGGACTCTAATTATCCACAGACCAGAGTGAAGTCACCCTGCTGAGAAATGAAGTGGCACAGCT 1531
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1532 GAAACAGCTTCTTCTGGCTCATAAAGATTGCCCTGTAACCGCCATGCAGAAGAAATCTGGCTATCATACTGCTG 1605
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1606 ATAAAGATGATAGTTCAGAAGACATTTCAGTGCCGAGTAGTCCACATACAGAAGCTATACAGCATAGTTCGGTC 1679
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1680 AGCACATCCAATGGAGTCAGTTCAACCTCCAAGGCAGAAGCTGTAGCCACTTCAGTCCTCACCCAGATGGCGGA 1753
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1754 CCAGAGTACAGAGCCTGCTCTTTCACAGATCGTTATGGCTCCTTCCTCCCAGTCACAGCCCTCAGGAAGTTGAT 1827
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1828 TAAAAACCTGCAGTACAACAGTTTTAGATACTCATTAGTGACTTCAAAGGGAAATCAAGGAAAGACCAGTTTCC 1901
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1902 ATTTATGCGAAATCTGTGGTTGTAAATTTTTTTTTTTTACTTGAAATTAAATTTGGCTCTAAAGTTGGTGTAGC 1975
Query 628 -------------------------------------------------------------------------- 627
Sbjct 1976 AGCAGTTGATCAGACTGAAAAACGGTTTTTAGTCTCTGGAAAAAGACTGATTTTGCTTTTTTTATAAATATTAT 2049
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2050 TAGATTTATTAATTTTTCTGTGCTCAATGTGTAAATTGTATTATAATTCATTGTGATTTATTTCACTTTTAATT 2123
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2124 TGCTGGTGTTTTAATAAATGGGGGTGTTACTGAATCTTTCTTCCCACTTCCATTTCTTTTGACCACCCCTTAAC 2197
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2198 CCTCAACTGTGACGGTAGTAGTATTATCATTTATACCAAAGTTTTGCATAGTCCCTGTTGACTTTGTAATGTTA 2271
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2272 ACGGAGTCATAAAAGCACTAGGCAAGAGAAAGATAGAAATTTGCTTTTAATCTTTTTGCCTTTTATTTTGCACA 2345
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2346 TTATGCAAAAGGAAAAACATTAAAGAACACTTTTTTTTAAGTGAGTGAAAACATGGTAAAGACATACAGTGCTT 2419
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2420 TTATGCACATTGTTAAGCTAAATCAAGGTCATTTATAATCATTTTCCTTTTTTATTTAAGATTTTAAGTAAACA 2493
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2494 AATTTTAGAATTTTCAGCATTTCAAAAATGATTTTATTTTTCAAGTCTTAAATTCAATATTTTACACCTATGTT 2567
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2568 TTGAGGCTAAAAATATGAAATTATATAATGTATGATACAGGGTTATCAAATATCTAATAATTTTTGAAATTAGC 2641
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2642 TCTTGTTTTTGGTTTTTTTGTTGTTGTTTTTACAGATTTCAGGTTACAAACTGCAAAGTTTATGCATAATTAAG 2715
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2716 TATGGTATGGTTGCCAGAAAAGCCTAAAATTACTACTTAGAAAATTTAAGACTGTTTACCCCCATTGTCTTGTA 2789
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2790 CTTGCGAGCTAACTTGTACTATTCTTGTGAAAGCACTGTCATCTTTTAGTAGCAAATTTTGATAATGTTTCTCG 2863
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2864 TGGAAAAAAAAATCAGTATCTATCTTTAGAACAATGTAATTATAATGTGGGAAGTGTGCATGAATGAGAGAGAG 2937
Query 628 -------------------------------------------------------------------------- 627
Sbjct 2938 TGTGTGTGTATCTGTGTGTGTGTGCGCGTGTGTGTGTGTCTTTTAATAGTTTATGCCAGCAATCTTTGCTTGAA 3011
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3012 TGTTTAACGATGCCTTCAGTGTGATGCTGGCCAATAGATGATTGCAGTTTAAAATGTCATTATTGTGCAGGCTT 3085
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3086 GGATAACTAACATTCCATGATGTAGCTTGTTTCTGATGAGATGATTGTAGGTACATTTTTCTCATTATCCAATC 3159
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3160 ATCTGTGGGATACTTAGTTTTCTAATGTGCCATTATCTATTTTTATTCTGCAGTTATGTTCAAAATACAGTACA 3233
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3234 TATTTTAAAATAGAATAAATTGTTAAACATAAAATTTTAAAAGTAGTAGATGTGCGTAAGAAAACTTTGTAAAA 3307
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3308 TAGTTATGAGTCCTACCCAGTAGCAACTTCTGGCATTCAAGCAGGATTCCACTATGTAAATATCTGTAATGCAT 3381
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3382 TTATAATAAGTTGTGTAGTTTGTCCTGCATCCATACTACACTATTTGCTAAAGTCTCAGTGCCATCTCCTAATG 3455
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3456 AGACTGACATTTTAAAAGTCTGTATGGAATATCCTTGATAATTCAAGGAAATATCCCTCCTGCCTAAGTTCCAA 3529
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3530 ACTGGGAAACATTCAAATTATATAAATGACATTTCAGGACTTTAAGTATGAAGATAATGGGAATTTTATTGTTT 3603
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3604 TGCTTTTTAAAATGAGAGCATTTTTATTTGATAATTTTTTTTAAATTTTTAATTTTTAACTAATTTCATTATTT 3677
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3678 TAAAGTAATCAGTTTTTCAAATCATGATTTTGATATCATTATTCTAAGGAGTTATCTCAAAGGCACAAAATATG 3751
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3752 AATTCTGCAAGAAGGCTATTTTTTATTGTAGTTTGAATGGGTTAGGAAAAGCCTCAATTTTTCACTCTTAAGTC 3825
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3826 CTTCAGTACATTTTTCTTTCATCTTATTACTTATGCAAGTTAAGGTTCTTTGGTAACAGAATTCTTGCAACTGT 3899
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3900 AAAATAAAACTACATAGATGTAAGAAGTCATGTAAACGGTTAACAAGCTTACCAAGGTTAGCAAAACTTTCATT 3973
Query 628 -------------------------------------------------------------------------- 627
Sbjct 3974 GTAAATCAGTCTGTACTGAGCAAATAAAAATCATTATTAGTTGTATAAACACAAATTCCATTTTGACTTTCAGG 4047
Query 628 -------------------------------------------------------------------------- 627
Sbjct 4048 ATGTCATACTACTTCTGTACCTAGCATTTTCAGTCCTTATATTTGCAATGTTACACAAACTGTACTATTTTCTT 4121
Query 628 ------------------------------------------------------- 627
Sbjct 4122 TTATGTGCAGTTTGCATGAGTAAACCATCAGAGAATAAATTCTATCTTTAAATTA 4176
