Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10792
- Subject:
- NR_002775.2
- Aligned Length:
- 3529
- Identities:
- 217
- Gaps:
- 3284
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCATTCTCTCTCTCTTGTCTTGTCTACCGCCATGTAAGACGTGTCTTTCACCTTCTGCCATGATTGTGAGGCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCCCAGCCACATGGAACTGAGTGTCAGCCGTGACCCTTATGATGGATGAGAAGAGGTATCATGCCTTTTCCAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCTACACCTGGAAGGAAGGTTCTGCAGCAAGTTCATGAGAGACGATATGTGGAATGTAATCAGAGCATACCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTAATACTTAAAAGCCTTTGCAGGGAGATCTCTCTTCCCATCTCCTTCCTGGAAGACAGAAGCCTTGTGCGAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCCTTGTGTGATGTCACCCCAGCTAGGGCCACCGGACGTTGGTCCTCAGCAGGGAGACTTTGGGTCCTCCACCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGACCCAGGGCTGACCTGCATGGCCAGGCCCCATGGCCTGGGTAGAACCTTGTTTCTGCTCCAGGAAAAAACGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCAACGAACCTTCATTTAAGAAAAAGCACAGCGTTCTCATGGGAACCAAGAAGACAAGCCCTTAATGCAAAGTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TATTCAGAGAGAAGAAAACAAGAAAAGCAGAGACGATTGGATTACAGCAATTGCTCTTATAACTCCTCTCCGCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CACCCCCTCGATGAGAAGCTGGTTTGAAGGACTGAGTATCAAATCCCTACTGAGCTCTGAGGTTCCAGGCAGCG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TAGAAAACAATGCCTGCCTTTTGCCAGGCATCCTCATGGAAGTGACATCGTCTTTAAACCTGTGTGGCAATCCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGACGCACCACCGTGATGCCCAGGGAAGACAGGGTGACCTGGAAACCCAACTACTTCCTTAAGATCATCCAGCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATTGGATGATTATCTGAAATGTTTCATCGTGGGAGCAGACAATGTGAACTCCAAGCAGATGCAGCAGATCCGCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGTCCCTCTGCGGCAAGGCCGTGGTGCTGATGGGCAAGAACGCCATGACGCGCAAGGCCATCCGAGGGCACCTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAAAACAGCCCAGCTCTGGAGAAACTGCTGCCTCGCATCTGGGAGAATGTGGGCTTTGTGTTCACCAAGGAGGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCTCACTGAGATCAGGGACCTGCTGCTGGCCAATAAGGTGCCAGCTGCCACCCGTGCTGGTGCCATTACCCCAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GTGAAGTCACTGTGCCAGCCCAGAATACTGGTCTGGACCCCGAGAAGACCTCCTTTTTCCAGGCTTTAGGTATC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATCACTAAAATCTCCAGGGGCGCCATTGAAATCCTGAGTGATGCGCAGCTGATCAAGACGGGAGACAAAGTGGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGCCAGTGAAGCCACGCTGCTGACCATGCTCAACATCTCCCCCTTCTCCTCTGGGCTGGTCATCCAGCAGGTGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCGACAACGGCAGCATCTACAACCCTGAAGTGCTTGACATCACAGAGGAAACTCTGTATTCTCGCTTCCTGGAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGTGTCCGCAATGTTGCCGGTGTCTGTCCGCAGATCCACTACCCAACTGTTGCATCAGTGCCCCATTCTATCAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CGACGGGTACAAACGAGTCCTGGCCTTGTCTGTGGAGACTGATGACAACTTCCTGCTTGCTGAAAAGGTCAAGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCTTCTTGGCTGATCCATCTGCCTTTGTGGCTGCAGCCCCTGTGGCTGCTGCCACCACAGCTGCTCCTGCTGCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCTGCTGCAGCCCCAGCTAAGGATGAAGCCAAGGAAGAGTCGGAGGGAGGAGTCAGACGAGGATATGGGATTGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTCTCTTTGACTAATCACCAAAAAGCAACCAACTTAGCCAGCTTTATTTGCAAAACAAGGAAATAAAGGCTTAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTCTTTAAAAAAAAAAAAAGAAAAGAAAAAAAGAAGAAAGAAAGAAACAAAGAAAGAAAGAAAGAGAAAGAAAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AAAAGAAAAAAAAAATAAAACAACACTTGCTCCCACGGTTGTGACAGTGGGGTTTAAAGAAAACCAGCAGGCGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CGGGCACGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGACCACGAGGTCAGGAGAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CGAGACCATCCTGGCTAGCACTGTGAAACCCCATCTGTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGGCG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGCATCTGTAGTCCCAGCTGCTCGGGAGGCTCAGGCAGGAGAATGGCATGAACCCAGGAGGCAGAGCTTGTAGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GAGCCGAGATCGCGCCACTGCACTCCAGCCTGGGTGACTGAGCCAGACTCCGTCTCAAAAAAAAAAAAAAAAAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GAAAAAAGAAAAAGAAAAAGAAAAGGAGTAGGCAGAAAGAGCACACAGTAGGTGTTCAACCAGCGTGAAGCTCC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CAGCCCCTGACAGTCCACGACAGCCTCAGAGCAGGCAGAAGGAGCACACAGTAGGTGTTCAGCCAGCGTGAAGC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CCCCAGCCCCTGACAGGCTACGACAGCCTCAGAGCAGGCAGAAGGAGCACACAGTAGGCATCCAGCCCACATGA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGCAGGCCCCCAGCCCCTGACAGGCCATGACAGCCTGAGGCAGGACCACATGGTGATCTCTAACCTGACCCCAG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GGGAGGACAGGAGGGAGGACGGATAGCACCCTGGGAGGCCAGGGCCTGGCGTCCCACCCTGTCACCCTCGTGCC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CAGTGTCCAGGGGCTCCGAGTTAGCCATGGCCTGGCGCGTAGCCTTAGGAGAGACCCTCCAGCCATTCGGTGGA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GCGTGGAGACCCCTCGTGGCCACACGGAGGACTGCAGCTCTCAGCGTGTGACCTCTCGCCAGCATCGGGGCTGC 2738
Query 1 --------------------------------------------------------------AT---------- 2
||
Sbjct 2739 TCTGCATGTAGCCCTGGGAGAGCTCTGCAAACATTGCTTGAGCTCCTTTTTATTTTATTTTTATTTCTTGAGAC 2812
Query 3 -GGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAG- 74
||| ||||.||| |..|||||||||||||||||||||...|||||.||||||.||||||||.|||| ||||
Sbjct 2813 AGGA-TCTCACTC--TCACCCAGGCTGGAGTGCAGTGGCACAATCTCAGCTCACCGCAACCTCCGCCT-CCAGA 2882
Query 75 GTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-T 147
||||||||||||||.||||||||||||||.||||||||||||.||.|||..|||.||.|||||||||||||| |
Sbjct 2883 GTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGATGTGCGCCGCCACGCCCGGCTAACT 2956
Query 148 TTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCC 221
|||||||||||.||.||||||||.||||||||||||.|.|||||||||||..||||||||.|||||||||||||
Sbjct 2957 TTTGTATTTTTAGTAGAGACGGGTTTTTGCCATGTTGGCCAGGCTGGTCTCAAACTCCTGGCCTCAAGTGATCC 3030
Query 222 AC-CACCTCGGCCTCCCAAAGTGTTGAGA--------------------------------------------- 249
|| |.||||||||||||||||||.||.||
Sbjct 3031 ACTCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCGGCTGCTTGAGCTCCTTTAAA 3104
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3105 GGTGCCACGATTTATGCTTGGTGTTATGGACAAAGAAAGGAAGTGATTCCCATCCCAGAGAATCTACCACCGGG 3178
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3179 AGAGTTACAGAGGCTGGGCCGCCCTATATCTACCTCCCACCCCTGTATACATCCATATAGAAGAGAACTCAGGG 3252
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3253 TTCAATCAGGGGACCTAGAGCAAGACACCCATTTTCCCATGCCTTGCTCCCCATATTGGCCTTATGGGCGTGGT 3326
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3327 ACCCTGTAAAGTACCTGGAATAGTCCAGAGCTCAAAAATTCTTATGATTATTAAAGGTATAAAAGGACAGGTAA 3400
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3401 ATTGAGGCCAAGTGCAGTGGCTTATACCTGCAATCCCAGCACTTTGGGAGGCCAAGGTAGGAAGATGGATTGAT 3474
Query 250 --------------------------------------------------- 249
Sbjct 3475 CCCAGGAGTTCAAGACCAGCCTGGGCAACATAGTGAGACCCCCATCTCTAT 3525
