Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10792
- Subject:
- NR_104275.2
- Aligned Length:
- 3411
- Identities:
- 215
- Gaps:
- 3164
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTACTGGGCTGGCTGCGGTGGCGCGCGGGCGCGGCACCCGGAAGTCGGCGGCGGTGGCGGAGGCGACCTCGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCTGTGTCAGCAGAGCCGCCCTGCACCACCATGTGCATCATCTTCTTTAAGTTTGATCCTCGCCCTGTTTCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAAACGCGTACAGGTAACCCCCTCGCTCTGCATCTGCTGCGCCCTGCAGGGTCCTGGGTGCCCAGCCAGTTCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATGCCACCCAAGCTGCTGTGTGCAGGAAGGTGTGTGGGCCAGGACGGGGCTGCACAGGCCTGGCACTGCCCTCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGGACAGGGTCACTCAGTGTGGGATGCTGTCAGAATGCCTCTCGGGGCGGGGACTCCAGTCAATGTACAAAGAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGAAGACTCAGCCACAGAAGGCAGCCACAGGCTCATCTTGGCAGCCAACAGGGATGAATTCTACAGCCGACCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCCAAGTTAGCTGACTTCTGGGGGAACAACAACGAGATCCTCAGTGGGCTGGACATGGAGGAAGGCAAGGAAGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGCACATGGCTGGGCATCAGCACACGTGGCAAGCTGGCAGCACTCACCAACTACCTGCAGCCGCAGCTGGACT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGCAGGCCCGAGGGCGAGCACAGCAAAGGGAGACGTCATTTGCTACTATGGGAACCGAGGGGAGCCTGATCCTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCGTTTTGACGCCAGGCAGCTGCCAGACCCGGCCATCGAGGACCAGGGTGGGGAGTACGTGCAGCCCATGCTGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCAAGTACGCGGCTGTGTGCGTGCGCTGCCCTGGCTACGGCACCAGAACCAACACTATCATCCTGGTAGATGCG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GACGGCCACGTGACCTTCACTGAGCGTAGCATGATGGACAAGGACCTCTCCCACTGGGAGACCAGAACCTATGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTTCACACTGCAGAGCTAACCCCACCTCTGGGCCTGGCCAGTGGGCTCCTGGGGGGCCCTGCCTTGAGGGGCAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGTGGACAGGAAACCTTCCTTTGCCATACTGCATTGCACTGCCCGTGGCTTGGCCAGCATCCCCCGGATCAGGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCCTGTGGTTTGCGTGTTACCCATCTGTGTCCCCATGCCCAGTTCAGGGTCTGCCTTTATGCCAGTGAGGAGCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCAGAGTCTGATACTAGGTCTAGGACCGGCCGAGGTATACCATGAACATGTGGATACACCTGAGCCCACTCTTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CACATGTACACAGGCACTCACATGGCACACACATACACTCCTGCGTGTGCACAAGCACACACATGCAAGCCATA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TACATGGACACCGACACAGGCACATGTACGTGCACAGGTGTGCTACACATGTGCACACATGCACAGTTGCACAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACACACACACACAGGTGCACACACACGATGCCGAACAAGGCAGAAGGGCGACTCTCACCTCTCATGTGCTTCTG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCCAGTAGGTCTTTGTTCTGGTCCAACGACAGGAGTAGGCTTGTATTTAAAAGCGGCCCCTCCTCTCCTGTGGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CACAGAACACAGGCGTGCTTGGACTCTTGACAAGCAGACCTGCTCCTGCAGAGGAGACAGCCACATTTGGAATT 1554
Query 1 -----------------------------------------------------ATGGAGTCTCGCTCTGTTGCC 21
|.|||||||.|||||||..||
Sbjct 1555 GGGCACCGAGAAGACCTGAGAAAAACCCACTCTCTCTTTTTTTTTTTTTTGAGACGGAGTCTTGCTCTGTCACC 1628
Query 22 CAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCT 95
|||||||||||||||||||..||||||||||||||||||||||.||||||||.||||||||.|||||.|||||.
Sbjct 1629 CAGGCTGGAGTGCAGTGGCACGATCTCGGCTCACTGCAACCTCCGCCTCCCAAGTTCAAGCAATTCTCCTGCCC 1702
Query 96 CAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-TTTTGTATTTTTGGTCGAGACG 168
||||||||.||.|||||||||.||.||.|.||..||||||.||||.||||| ||||||.|||||.||.||||||
Sbjct 1703 CAGCCTCCTGATTAGCTGGGATTACAGGCGTGTGCCACCATGCCCAGCTAATTTTTGTGTTTTTAGTAGAGACG 1776
Query 169 GGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCTCGGCCTCCCAAAG 241
||||||..|||||||.|||||||||||||||||||||||||.| .|||||||||| .||||||||||||||||
Sbjct 1777 GGGTTTCACCATGTTGGTCAGGCTGGTCTTGAACTCCTGACGT--GGTGATCCACCTGCCTCGGCCTCCCAAAG 1848
Query 242 TGTTGAGA------------------------------------------------------------------ 249
||.||.||
Sbjct 1849 TGCTGGGATTACAGGCGTGAGCCACCACGCCTGGCCGAAAAACCCACTCTCATAACAGAAGTGCAGACTCATTG 1922
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1923 CTAGATTCAGTGCCCTTGAGTGTGCCAGAGGTCCTCTGTGTTTGAGACAATCCTGTGTGTGCCAGGAGGCTCCG 1996
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1997 TGTGCACCAGGGGCTCTCAGAATCCCGCTTACCCAGCTGGAGACCATGCCTCTGGCAGCCCCATCTCAGCCAGC 2070
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2071 CCTGCTCTCTCCCTCTTCCCTCCAGGTGAGGCAAACTTCATAGGAATCTGTACCTGAATGTGAGCTCCTGATAA 2144
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2145 TAAAACTCTGAGGCTTTGGTGAGCGCATTTCGAGGCCTTTCCCTTGTATGCAGGGTGCCAGTGGGAGCTGCTAT 2218
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2219 GTCTCCTGTGCAGCCAGACACCCTGGACGAGGCCCTTCCCACCTCCCCCTTTCCTCACGGCTTCTTCAGCACCA 2292
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2293 CATGTGGATGCCTGTGGGTCAGTCCATCTGTCCATGGGCAGGGGCCGCTGTGAGAGACCCCATGCGCGTGGGAT 2366
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2367 GTGGTAGATGCTGATTATGGGGCCAGCCACCCATACAGGTCTATCAGGTCGCAATGGAGGCCCCACTGGAGCGG 2440
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2441 GAGGCAGGCTGGCCTGGACTTCTGTTGGATGATGGGGGCCAGGGGATGGTAGGAGGGGCAGGAGAGCAGGTCTG 2514
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2515 CATCTGTCTCAGCCCCAGGAGCTCCTGGTTTGGGGCCAGCTCTAAGGAGCTTCATCCCTGAGCCTGGCCGAGTA 2588
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2589 TAAGGGGGTCCCGGATATCCAATGCTGAGACCTAGACTTTTCTAAGCCTCTGCACCCAACCCCTAACTTGGCCT 2662
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2663 TTTCAGACCCATGAGAGTGCAGGGTGGGTGTGGACCTGCGCCAGGGCTTCCCAGCCTGATTGTGACATGATGTG 2736
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2737 AGTCCACCTAGGGAGGAGCAGGGGCCTCCCCGTCTCTTCCCCTTCTTGCCCAGACCACTTTGCTGGGCTCAGAG 2810
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2811 CCTTCCATGGCTCACTTTGAACTCAGAAGAGTTTCCCAGCTGCGACCCAGGCTGCACCCCCAGGCCTGAGGAGA 2884
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2885 AACTGAGGCCCCACATCCCATACGTGTCCTCTGAGTCAGGACAACAGGCTCCCGGCTGGGGGCACTGCCCTTGC 2958
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2959 TGCCAACACATTCACCTGCCCCAGTGGCTACCATGTCCTGTGCCGGTGACCAGTGCCAGTCCCCAACCTGGATG 3032
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3033 GTGCCCTGCCCTCATGAAGAGCCCCCCGGATGTTCACCTCTGCCCAGAGACCCGGCCTGCCCAGGAAGAGCAGT 3106
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3107 CTCTGCTCTTGTGTGGGTCCCTCTGCCCCCACCCTGCCCAGGGCTCCCCAGCAGCCTGAGGCCCCTAAGGAAGA 3180
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3181 ACAGCCCTCAATGGTGATTCTATTGGTGTTATGAGTTGTGTCCCCAAAGAGATATATCAGTGTCCTGACCCACA 3254
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3255 GTACCTCAGAATGTGACTGCATTTGGAGATAGGGTTCTTCCAGGGGTAACCAAGGTAGAATGAGGTCGTTAGTG 3328
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3329 TGGGCCCTAATCCAATATGACGGCTATCCTTATAAAAAGAGGAACATTTAGGCTGGATACAGTGGCTCATGCCT 3402
Query 250 ------- 249
Sbjct 3403 ATAATCC 3409
